Crassostrea virginica (eastern oyster): 111121781
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Entry
111121781 CDS
T09197
Name
(RefSeq) ATP-dependent RNA helicase DDX24-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111121781
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111121781
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Helicases
111121781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
111121781
NCBI-ProteinID:
XP_022318919
UniProt:
A0A8B8CUL5
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Position
2:complement(38602476..38609125)
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AA seq
884 aa
AA seq
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MASTRHVKLKSSWKKFDISPELLSDKEFESLISCKVLTDYEILDSNATKSRKSSQTDSNK
SVIKTNKTKKLEKSIVKIKLQGHATKNKNTISSGNTGRAIDVSAELWDGKTKTERKVNAK
KTKKNKAKVQKKNDGWTVAPLQTEIACDVATDTNVIPKHKKAKLRQNKTGEKSKETKKNS
ERKAKKRKQNEIAESYSSDRKRMKIKEESEIDPVYSIDDGTLNEKMAAWKDLFVPKEVLR
ALCKNNFLSPTPIQAMALPSAIRDRKDIVGAAETGSGKTLAFGIPVIHNILKYKEKQDRN
AEFFDEEEDKEIEEREEEEDLELDEENSIDDDDDDDEEEEEEEEEEEEEEEEDIEFLNMD
ENIQSDENSELGEENKMKGLGCVKVIDDADFSSLGFPDPVPVLKKTNKAPLALILQPTRE
LAVQVKDHLQVAAAYTDITIAPILGGMSAEKQKRILKKCPDILVATPGRLWELVEQDPYL
ARIDEVDSLVIDEADRMIEKGHFEELTQILAYINRNEEKKNKRQTFVFSATLTLVHSGPQ
RSVRKKATLTEEKKLETLMSRIQMREKPKVIDLTRKIGTVETLTEARINCSLEEKDLYLY
YFLIQYPGRTLIFANSKDCIRRLVSIFTLLKTNPLPLHADMHQKQRLKNLEKFTANDRAV
LLASDVAARGLDIPNVEHVIHYQVPQTVENYVHRSGRTARAMKEGLSVMLISPEDIKNYR
KIVHTLNRDEDLPIFPVEHQLVSVLRKRLNLAKKIDTEEHRFNKKKRQNDWFEKAAKEMD
MLIDDEELITDLGDSFELSGRKTDLKNMRAELDQMLKQRLTPHSFSGKYLTQSGKLELPA
NEDKKDALKVMKKDRKSQDKLMESSQSRKTRRPMKKKSKWKKGK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccagacacgtgaaactgaaatcaagctggaaaaaattcgatatatccccg
gaattgttgtctgacaaagaatttgagtctttgatcagttgcaaagtattgacagattat
gaaattttagattcaaatgccacgaaaagcagaaaatcatctcaaacagactccaacaaa
agtgtgatcaagacaaacaaaacgaaaaagctagaaaaatccatagtcaaaattaagtta
cagggtcatgcaacaaaaaacaaaaacaccatatcatcaggaaataccggtagagcaatt
gatgtttctgcagagctatgggatggaaagactaagactgaacgtaaagtaaacgcaaag
aaaacaaaaaagaataaagcaaaggtgcagaaaaagaatgacggctggactgtagctccg
cttcaaactgagatagcatgtgatgttgctacagacacaaatgtgatcccgaaacacaaa
aaggcaaaactaaggcaaaataagacaggtgaaaagtcaaaggagaccaagaaaaatagt
gagaggaaggcaaagaaaagaaaacaaaatgaaattgctgaaagttactcaagtgataga
aaaaggatgaagataaaagaagaatcagaaatagatccagtatattctatagatgatgga
acattaaatgagaaaatggcagcatggaaagatttatttgttcccaaagaggtgcttcga
gctctctgtaagaacaattttttgtcgcccactccaatccaggccatggcccttcccagt
gctatcagggacagaaaggacatcgtaggggcagctgaaaccggaagtgggaaaacttta
gcttttggaatccctgttattcataacatccttaaatataaagaaaagcaagatagaaat
gcagagttttttgatgaagaagaggataaagaaatagaggaaagagaagaagaggaggat
cttgaattagatgaagaaaatagcattgatgatgatgatgatgatgatgaggaggaggag
gaggaggaggaggaggaggaggaggaggaggaggaggatatagagttcttaaatatggat
gagaacatacaaagtgatgaaaattccgagttaggggaagaaaacaagatgaaagggtta
ggctgcgtgaaggtcatagatgatgctgatttttcttcactgggcttccctgatcctgtc
ccagtgctgaagaaaaccaacaaagcccctttagctctcattctccaaccaaccagagag
ctggctgttcaggtcaaagatcacctacaggtggcagcagcatacactgatatcacgata
gcacctatacttggtggaatgtctgcagaaaaacaaaagagaattctaaaaaagtgtcca
gacatcttggtagcaacacctggccgattgtgggagctagtggaacaggatccatatctt
gcacggattgatgaagtggacagtttggtcatagatgaggctgatcgaatgatagagaaa
ggccactttgaagagttgactcaaattttggcttacatcaacagaaatgaggaaaagaaa
aacaagaggcagacatttgtattctcagccactttgaccttggtgcactcaggtcctcaa
cgctctgtacgcaagaaagcaacactcaccgaagaaaaaaaacttgaaacattgatgagt
agaattcagatgagagagaaacccaaagtgattgacctcaccaggaagatagggacagtg
gagacccttacagaggccaggatcaactgtagcttggaggagaaggatctgtacctgtac
tacttcctgatccagtatccaggtcgtactcttattttcgccaacagtaaggactgtatt
cggcgcctggtctccatcttcaccctcctcaaaactaaccccctccctctccatgctgac
atgcaccagaaacagaggttgaaaaacttggaaaaattcactgccaatgacagagctgtg
ttgctggcttcagacgttgctgcgcgaggactggacattccaaatgtggaacatgttatt
cactaccaagtcccccaaacagtcgagaattatgtccacaggagtggtagaactgctcgt
gccatgaaggaagggttaagtgtcatgctcatctccccagaggacatcaaaaactaccgc
aagattgtccacaccctcaacagagatgaagatcttcccatttttcctgtggaacaccag
cttgtgtcagttttaagaaagaggctgaacttggccaagaaaattgatacagaggagcat
agatttaacaagaagaagagacaaaacgactggtttgagaaggcagcaaaagaaatggac
atgttgattgatgacgaggaacttataactgatctaggggattcctttgagttgtcaggg
aggaagacagatttaaagaacatgagggctgaactggatcagatgttgaagcagaggttg
actcctcactctttcagtggaaagtatctcacccagtcaggcaaactggagctgcccgct
aatgaagacaagaaagatgctctgaaagttatgaagaaagacagaaaatcacaggacaaa
cttatggaatcgagtcagagtaggaaaacacgacggcccatgaaaaagaagtcaaaatgg
aaaaagggaaaataa
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