Crassostrea virginica (eastern oyster): 111121812
Help
Entry
111121812 CDS
T09197
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZNFX1
AAA_19
AAA_30
UvrD-helicase
AAA_5
ResIII
zf-CHCC_ins
Fe-S_biosyn
PhoH
AAA_22
Motif
Other DBs
NCBI-GeneID:
111121812
NCBI-ProteinID:
XP_022318949
UniProt:
A0A8B8CUP4
LinkDB
All DBs
Position
2:complement(56615207..56621906)
Genome browser
AA seq
1911 aa
AA seq
DB search
MARRKRRWQFHNPSPYNPKRRRERSPFNYRGYIEQITTCRQIDTDSSVDLHDEAVSCRYF
PVINDQSRTRTSELSKIEDTLESSRRLDPSTIEWIIDSLAEALEGDDINVCSVLKRHNFL
GRPDVYGMVLDTLTLDFPDMKGWIENLVTLVLVLSKKETIKVRHIKKILGPLSQIKCFKD
PSIKNQIENAVEMLEKRERYEKFQEDSHSQIKVTANVRRMLHDLITCEIFPTAEMVVKDE
HFPLFPRSLRKPYKSPAHYLIEQFSLFLEDFIGPMRVGIKHYIEYVRSEEKGSRFKDDDV
RIYKRIRLLDNDCIAGSGICLQVQFDTSTMKKIRWENCNFLQYGNLVCLTYDDCSELTYA
LIANRDVKELSNGRIYLEVIEKDQQNISSLRQINESRLVMIESKSFYTAYGHTLKSLQTM
AEEMLEKNEDIPFSKYLVHLDNDVLEPVYTRQPTYEMTVANFRCLMKNVKEQQNIDYDKV
AILDVTKWPTMLEMGLNEDQYKALQKCLTKKIGILQGPPGTGKTWMGLRIVEFFLCNHDL
FKQKERRPILLLSYTNHALDQFFEKLLESKHLTFLFRNKTQPFVRVGGRCTNERVKPFVI
KEHRKRTKSWSTNRSEIYNSRDSVKYLDTLLKYLQNGIVSAEFLHSENIIPRIQYDSLSY
YRYLDFTLMSNDRIVEWLGIWENYDNTDTENQTADIQDANVDELYFEENDKRVLDDEDEV
NDKAKEIEKQILKLFTLTAKHGLENCSAQCHKKMLSFVRRNLEKRENVMKIQLIRGIRNV
WFLNFEDRWRLYRFWIDELTMKLQHRRKNLIDYFNEKNKAVTKERFAEDLDIIKSCYMFG
MTTTGAASNMTLLREIQPRIVIVEEAAQVHEQHVIGCLTKHLEHLILIGDHKQLRPTMNN
HALKCSHKTDVSLMERLVMNKFPYHCLTKQHRMRPEICRLLTPAIYPSLENHPTVQTYPN
VRGMKHNLFFIDHQSPESQSNFSTSYANDFEAKMIARLYKYLILQGYSNSDITILSAYNE
QVRKIRNEVSEMSKQLRVANGRCNQRVHITAVDNFQGEENRIILLSLVRSNKECKLGHLG
DPQRICVSLSRAREGLFVFGDFDMIYNRNNLLWMKIIEAAKQNEVLGRNLTVVCQKHPET
TTTISCPQDFEKVQDGGCDQLCSTQLKCGHVCDRKCHADDTIHDLGCEKPCLKRCENGHP
CREKCHKDCRPCTTKMEKTFSTCEHKIQIPCCEFYDFRPCQSECNRELGCGHPCTLKCSQ
DCNTVPCRKIINVKHPQCGHMTTVECCSKNDFRCTEQCSKVLKCGHTCTLKCFQDCDILC
CQEMINVNHPQCGHAALVKCFEKNDFQCIQKCSKILKCGHACTLKCWQDCKIVSCQAMQN
VKNPRCGHETLVKCCDKNKFQCKEKCSKLLKCGHTCKGNCQMCSNGRLHIPCREVCNRKL
VCGHRCSYYCSNPCPPCDDICTRGCLHMKFEPCGHLCRKPCEPCQELCGWNCDKRCNNKY
HCSRECSEICDRPPCDKRCDKSLKCKTSHRCIGLCGEKCPNICKRCNKSKVLALLNGTKN
IDEALFVELVDCEHIFEKDFMDEYMGLHTRNESSEDKRLLLKSCPTCSTPIRRSGRYKNI
IIAMERDLMEVNRKCENFLFFKNDLCRFRITDLIHVCQASRIFSPRTISQLFCIGNKDVK
SILDEFLNKAYPRMEEISRTKIRSTVREMKGTFCVIAKWILLHSKISFTEDELEKLLDEV
ERSLINADLIIMKNELKSELSSEDMQQIDFQIEKVRCPDGETFCREDLASAQSLIDAIHR
SSSTSCLDTLDKQRRLSLLDVQCGKHGNWFKCKKGHIYLSEVGGTVDVPRCPDCLSTSDD
PETSPVDEMNDVGRTLTPAPIDEEVKDVRCTEMDLSGDDVDMTAVDTNSPT
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaggaagagaaggtggcaatttcataatccctccccttacaatcccaaacga
aggcgggagcggtctccttttaattataggggatacatagagcaaataaccacgtgtcgt
cagatcgatactgatagttctgtggaccttcatgacgaagcagtttcatgcaggtatttt
ccagtgataaatgatcaaagtaggactcgtacaagcgagttaagcaagatagaagacact
cttgaatcaagcaggcgtttggatcctagtaccatagagtggataatcgatagcttagca
gaagcacttgaaggtgatgatattaatgtctgctccgtcctcaaaagacataattttttg
ggtcgaccggatgtgtatggaatggttttggacacattaacgttggacttcccagatatg
aaaggatggatagaaaacctagtgactctagtccttgtactgtcaaagaaggaaacaata
aaggttaggcatatcaaaaagattttaggaccactttcacagataaaatgtttcaaagac
ccatcaataaaaaaccagatagaaaatgctgtggagatgctagaaaaaagagaaagatat
gaaaaatttcaggaggatagtcattcacaaataaaagtaaccgccaacgtaagaagaatg
ttgcatgacttgattacctgcgaaatatttcctacagcagaaatggttgtaaaagatgaa
cattttccacttttcccgcgttccttgcgtaaaccttataaaagtcctgcacattatctt
attgagcagttcagtctgtttcttgaagactttattgggccaatgcgtgttgggataaag
cactatattgaatatgttcggtcggaggaaaaaggcagcagattcaaagatgatgatgtt
cgaatttacaagagaatccgtctgctcgacaacgattgcattgcaggttcagggatttgt
ttacaggtccaatttgatactagtactatgaaaaagatacgatgggagaactgcaatttt
ttacagtatggaaacctcgtttgtttgacttacgatgactgttcagaattgacttacgca
ttaattgcaaatcgtgatgttaaagaactgtcaaatggaagaatttatcttgaagttatt
gaaaaggatcagcaaaatatcagttcattaagacagataaatgaatcgagactggttatg
attgagagtaaatccttttatacggcgtacggtcacacgttgaaatcattgcagacaatg
gccgaggaaatgctagagaaaaacgaagatattccgttttctaaatacttggttcattta
gacaatgatgtattggaacctgtttatactcgacagccaacctatgaaatgacggtggca
aattttcggtgcctgatgaagaatgtcaaagaacaacaaaatattgattacgataaagta
gcaatccttgacgttacaaaatggcctacaatgctcgaaatgggactcaacgaagaccaa
tataaggccctacaaaaatgtttgacaaagaaaattggtatcctgcaaggtccacccggc
actggaaaaacttggatgggacttcgaatagtggagttttttctatgtaaccacgactta
tttaaacaaaaggagaggcgtcccatcttattgcttagttataccaatcatgcactggat
caattcttcgaaaagttattggaatcaaaacatcttacatttctgtttagaaataaaaca
cagccatttgtacgtgttggaggccgatgcacaaatgaacgagtgaaaccttttgtaata
aaagagcaccgaaagaggacgaaatcatggagtacaaatcgatcggaaatctacaattcc
cgcgatagtgttaaatatcttgatactttactgaaatatttacagaacgggatcgtttca
gctgagttccttcactctgaaaacattataccaagaatccaatatgattcactgtcgtat
taccggtatttggattttacactaatgtcaaatgacagaattgtagaatggttgggcata
tgggagaattatgataatactgatacggaaaatcagactgctgatatacaagatgcaaat
gttgacgaattgtatttcgaagaaaatgacaaaagagtattagacgatgaagatgaagtc
aatgacaaagccaaagaaattgaaaaacaaattctcaaactatttactttaactgctaag
catggtttggaaaattgttcagctcaatgccacaaaaaaatgttgtcatttgtccgtaga
aatctcgaaaagagggagaatgtaatgaagattcaattaattcgtggaattcgaaacgtt
tggtttttgaattttgaagatcgttggaggctttatcgattttggatagacgagcttacc
atgaagcttcagcatcgaaggaaaaaccttattgattattttaacgaaaagaacaaagct
gttacgaaggagcgatttgctgaagacttggatattattaaatcttgctacatgtttggt
atgaccactactggtgccgcttcaaacatgactcttttgagagagatacaaccacgtatt
gttatagtggaagaagcggctcaggtccacgaacagcacgtgattggctgtttaacaaag
cacctggaacacttaatcttaattggtgaccataagcaactgcgtccaacgatgaataat
catgctttgaaatgttcccataaaacagatgtctcattgatggaaagactggtcatgaat
aagtttccttatcattgtttaacgaaacaacacagaatgagacccgaaatctgtcgattg
ctaacaccagcaatttatccatccctcgaaaaccacccaaccgttcaaacctatccgaat
gtgcgaggcatgaaacataacctatttttcatcgatcaccagagccccgaaagtcaatca
aatttttctacaagctatgccaatgactttgaggctaaaatgatagctaggttgtataaa
tacttaattctgcaaggttattctaactcggacattacaatcttatcggcctataatgaa
caggttaggaaaattagaaatgaagtgtctgaaatgtcaaagcaactacgagttgcaaat
ggcagatgtaaccagagagttcacataacggcagttgacaattttcaaggggaggaaaac
cgaataattctgttatcgcttgtccgtagcaacaaggaatgcaaactcggacatttggga
gatcctcaaagaatttgcgtttctttgtcaagagcgagagagggactgtttgtctttgga
gattttgacatgatatacaatcggaataaccttctctggatgaaaataatcgaagcagca
aagcagaatgaagtgctaggaagaaatcttacagttgtttgtcagaagcatccggaaaca
acaacaacgatatcatgtccacaagattttgaaaaagttcaagatgggggatgtgatcaa
ctttgctcgactcaacttaagtgtggacatgtctgtgataggaaatgtcatgctgatgat
actattcatgatcttgggtgtgaaaaaccatgcttaaaacggtgtgaaaatggtcatcct
tgccgggaaaaatgtcacaaagactgcagaccatgcacaacaaagatggaaaagacattt
agtacatgtgaacataaaatacaaattccctgttgtgaattttatgattttagaccatgc
caatcagaatgcaacagagaactcgggtgtggtcatccttgtacattaaaatgtagccaa
gactgcaacacagttccttgtcgcaaaataataaacgtgaaacatccacaatgcggccac
atgacaacggtagaatgttgcagcaagaatgattttcgctgcacagaacaatgttcaaaa
gtcttaaagtgtggtcatacatgtacactgaaatgtttccaagactgcgatatactttgc
tgtcaagagatgataaacgtgaaccatccacaatgcgggcacgcggcattggtaaaatgt
tttgagaaaaatgattttcagtgtatacaaaaatgttcaaaaatcttaaagtgtggccat
gcttgtacactaaaatgttggcaagactgcaaaatagtttcttgtcaagctatgcagaac
gtcaaaaatccaagatgtggtcatgaaacattggtaaaatgttgtgataaaaataaattt
caatgtaaagaaaaatgttcaaaacttctgaagtgtggtcatacttgcaaaggaaattgt
caaatgtgttcgaatggaaggttacacatcccttgtagagaagtctgcaatcggaagttg
gtttgtggacatcgttgcagttattattgctctaatccatgcccgccttgtgatgatatt
tgcacaaggggttgtctgcatatgaaatttgaaccctgtggtcatttatgcagaaaacct
tgcgagccatgtcaagaattgtgtggctggaattgtgataaacgatgcaataacaaatat
cattgttccagagagtgttctgagatctgcgatagaccgccatgcgacaagagatgtgat
aagtcattgaaatgcaaaaccagtcacaggtgcattggattgtgtggggaaaaatgtcca
aatatttgtaaaagatgtaacaagagtaaagtattggcgttattaaacggaacaaaaaac
atagatgaggcactcttcgttgaacttgttgattgtgaacacatatttgagaaggatttt
atggacgagtacatgggtttacatacaagaaatgaaagttccgaagacaaaagactactc
ctgaagtcctgcccgacctgttccacccccatacgaagaagcggccgatacaaaaacatc
ataatcgctatggaaagggatctgatggaagtaaatcggaaatgtgagaattttttattt
tttaaaaatgatttatgtcgtttcagaattacagatctcattcatgtctgtcaggcctct
aggattttctcaccaagaacaatcagtcaattgttttgcattggaaacaaggacgttaaa
tctattttggatgaattcttaaacaaagcgtatccgcgaatggaggaaatttcgagaaca
aaaattcgatcgacagttcgggaaatgaaaggaacattttgtgtaattgcaaaatggatt
ttactccattcgaaaatctcttttactgaagatgaactggagaaattgttggatgaagtg
gagagatctttgataaatgcagatctgattattatgaaaaatgaattaaaaagtgaacta
tcttctgaagatatgcagcagattgactttcagatagagaaagtgagatgtccggatggg
gaaacgttttgtcgcgaggatcttgcatcagctcagtccctgatagatgcgattcacaga
agctcatctacctcgtgtctggacactctggacaagcaaagaaggttgtctttgctagat
gttcaatgtgggaagcacgggaactggttcaaatgtaaaaaaggtcacatttacctgagt
gaggtgggtggtaccgtggatgttccgaggtgtccagactgtctctccacctctgatgac
cccgagacctctcccgtggatgagatgaatgatgttggacgcaccctgaccccagcaccc
attgatgaagaggtgaaggacgttcggtgcacggagatggatctttccggtgatgatgta
gatatgacagcggttgatactaattctcctacgtag
DBGET
integrated database retrieval system