Crassostrea virginica (eastern oyster): 111121997
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Entry
111121997 CDS
T09197
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111121997
03012 Translation factors [BR:
cvn03012
]
111121997
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111121997
Translation factors [BR:
cvn03012
]
Eukaryotic type
Initiation factors
eIF-3
111121997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40_Prp19
RRM_1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111121997
NCBI-ProteinID:
XP_022319223
UniProt:
A0A8B8CFF6
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Position
2:complement(24046658..24052793)
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AA seq
701 aa
AA seq
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MAADRGSENESRRQRKSESQSQGSVNGDEMEEPDFSDPEGFLDDISDEELLGDLLKTRPK
ESDGIDNIILVDNVPQVGPERQDKLKNVIHKIFEKFGKINREFFPVSGDKTKGYVFLEYT
SPLHASEAVKMANGYKLDKQHTLLVNVFSDFDKYEKVPEEWEPPKPKPYHDVGNLRYFLQ
DPDCYDQFSVIYDGGDRTAIFKNTTREPVVVEERARWTETYIRWSPQGTYLATFHAKGIA
LWGGEKFEQIMRFSHPGVQLIDFSPCERYMVTFSPILSNQEDQQQIIIWDIRTGMKKRGF
HCETQSTWPILKWSHDGSYFGRITPDTLSVYETPSMGLLEKKSLKITGLRDFSWSPSDNI
IAYWVPEQQNVPARVTLIQMPSRQELCIKNLFNVADCKMHWQKNGDYLCVKVDRYSKAKK
IDEKDQFKYSGLYYNFELFRIREKQIPVDKVEVKENVIAFAWEPVGSRFAYIHGESPRIS
VSFYQIRPGKVETIKTLERRQANHLFWSPTGQFIVLAGLRNMNGVLEFVDASDVTVMAQT
EHFMATDVEWDPTGRYVVSAVSWWGHKVDNAYWIWSFQGRLLQKIQLERFCQLLWRPRPP
SLLSVEQIRAIKKNMKKYTEQFEVMDRLRQSNVSSEILEKRSEMMNEYKRFKEQAAEEWE
SMKYRRMELRGGVDTDTLGDEENDEEIVEFLLKVEEVVVEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacaggggctcggaaaacgagtcaaggaggcaaagaaagtcagagtcccag
tcacaagggagcgtaaatggtgacgagatggaagagccagatttcagtgatccagagggc
tttcttgatgacatttccgatgaagaattgctaggagatttattaaagacaaggccaaaa
gaatccgatggcatagataacatcattctggtggataatgttccacaagtaggacctgag
aggcaggataaactgaaaaatgtgatacataaaatctttgagaagtttggcaaaatcaac
agagaattctttccagtgtctggtgataaaactaaagggtatgtttttcttgaatacaca
tcccctcttcatgcaagtgaagctgtaaagatggcaaatggatacaagcttgacaagcag
catacacttctcgtgaatgtcttctcagactttgataagtatgagaaggtcccagaggaa
tgggaaccaccgaagcccaaaccataccatgatgttgggaatttgcgctactttttgcaa
gaccctgattgttacgatcaattcagtgtcatatatgatggaggggataggacagctatc
ttcaagaacaccaccagagaaccagttgttgtggaagagagagctcgatggactgagacc
tacattcgttggtcacctcaaggtacttacctggccactttccatgccaagggtatagcc
ctgtggggaggggaaaaatttgagcagatcatgaggttcagccaccctggagtgcagctg
attgacttctctccctgcgagcgctacatggtgaccttcagtcccattctgtccaatcag
gaggaccaacagcagatcatcatctgggacatcaggactggcatgaagaagcgaggattt
cactgcgagacccagtccacctggcccatactgaagtggagtcatgatggtagttacttt
ggaagaattactccagacacccttagtgtgtatgagacaccatcaatgggattgcttgaa
aagaagagtttgaaaatcactggacttagggatttctcttggtctccctcggataacatc
attgcttactgggtgcctgaacagcagaatgtccccgctagggtgaccctcattcagatg
ccaagtcgtcaggaactctgcatcaaaaacctcttcaacgtggctgactgcaagatgcac
tggcagaagaatggcgactacctgtgtgtcaaggtcgatcgctactctaaggccaagaag
attgatgagaaagaccagtttaaatacagtggactttactataattttgagttgttcaga
attcgtgaaaagcagattccagtggataaagtggaggtcaaagagaatgtgattgcgttt
gcctgggagccggttggcagtcgatttgcgtatattcatggggaatctccaaggatttct
gtttcattttaccagatcagacctggaaaagtggaaactatcaaaactttggaaagaaga
caagccaaccaccttttctggagtcctacagggcagttcattgtcttagcaggattgcgc
aatatgaatggtgttctggaatttgtggatgcctctgacgtgactgtgatggctcagact
gagcacttcatggccacggatgtggagtgggaccccacaggtcgatacgtcgtgtcagcc
gtcagctggtggggtcacaaggtggataatgcctattggatatggtccttccaaggacgt
ttgctgcaaaagattcagctagaaagattctgtcagttgctatggagaccccgccctccc
agcctactctctgtggaacagattcgcgccattaagaagaacatgaagaagtatactgaa
cagtttgaagttatggacagattgagacaatccaatgtttcttccgagattctggagaag
agaagtgaaatgatgaatgagtacaaacgtttcaaagagcaagccgcagaagagtgggaa
agcatgaagtacaggagaatggagctcaggggaggtgtggacacagatactttgggcgat
gaggagaatgatgaggaaattgtcgagtttttgcttaaagttgaagaagtcgtcgttgaa
gagtaa
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