Crassostrea virginica (eastern oyster): 111122238
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Entry
111122238 CDS
T09197
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111122238
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
111122238
TFIIIC, fungi type
111122238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_14
TPR_12
TPR_16
TPR_19
TPR_17
TPR_6
TPR_9
TPR_CcmH_CycH
TPR_MalT
ARM_TT21_5th
HAT_PRP39_C
ANAPC3
ARM_TT21_C
TPR_21
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
111122238
NCBI-ProteinID:
XP_022319588
UniProt:
A0A8B8CUV3
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Position
2:complement(46274552..46287304)
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AA seq
930 aa
AA seq
DB search
MEGNEENNLGSHILNVDNTEPCTSGDTTTTYTLLGNVIECTPANVTEEENVHFIEVPNDQ
LANLGLLATVSSDGLHNFSIATEPGPSGFQLVHEDNVNLESSLNMPGLEPTIQYLTGKIS
FSEFSQLMELEDPDPTVDVDDAVQTIHVTNVVMPTEEEKSIEEEEVEEESLVENTTQSNL
DVNEKSPTKRKRRRKKKYSDLPIHLEGLMGEANIKFAQGDHDKAISICMDIIKMAPEAHM
PFQTLGMIYEDQGDLKKSLQYSLIAAYLNPVDRDSWMRLADLCLDLGDKQQATICYSKAL
KAAPQNPGNLDIYLSRSQLYEELGEKKKALEGYKSMLKITPPQDGERYMEIARTITKHYY
EEDDKVSAMETMRNAFEANSENVTAEDVNLFMELLMTQKMFLQAIEVLVNHCGVVFHLNT
EREWSQEMNLSISLIENGTVKINSVAIPELLPIDLRVKLGICLIQNKYDSLAEFVITQLL
QEDVDEVGDLYLDVAEAYMEQKCFTEAKPILERLVCSQNYNLAAVWLRLADCLNSLGDLE
GAEAAYRQVVEMAPSHIGARMSLSTLQSHLGKHEEALKALNRDESDDLLTKQEKSLLLHK
CMLLYAQGKFDDFHQACKSLLFNMYKDLNNPDFIKAVYCCRSHKTRKEMLQGHFKPGYKD
SSKSDIPVDDLWDLFIKLSELLFNNKRYEDLLEVTTLGMSCPYFMMEPRKVKQAEFMSLL
GCLLTKNEYFAFSHIREICIKEGHKSQAWNLLNQVLLIATENRHNRFCLRYLLTNPDHAP
VGLLNGHNATISGTYKYALGEYVAVLRKCPEDPLVNLCIGLTFIHLAGQKFSSKKHSLFT
QGLTFLNNYMELRGECQETYYNMGRALHQLGLTYAAVHYYKKGLTFPPVVDDEENRFDLT
PQLAYNLMLIYKTSGSEVLAKHIMQRYLVI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaatgaagaaaataacttggggtctcatatattaaacgttgacaacacagaa
ccctgtacaagtggagataccacaacgacttatactttgttaggaaatgttattgaatgc
accccagcaaatgtcacggaagaggagaatgttcactttatcgaggttccaaacgaccaa
ttggccaacttaggactactcgcaactgtatcctctgatgggctgcacaacttcagcata
gcaactgagcctggaccttcaggattccagctagtgcatgaagataatgttaacttagag
tccagtctaaacatgcctgggttagaaccaaccatccagtacctcacagggaagataagc
ttcagtgagttcagtcagctaatggaattggaggatccagatcccactgttgacgttgat
gatgctgttcagacaatacatgtgacaaatgttgtcatgccaacagaggaggaaaagagt
atagaagaagaggaggtagaggaggagagtctggttgaaaacaccacccaatcaaatctt
gatgtgaatgaaaagtcccctacaaagagaaaacgtcgaaggaaaaagaaatacagtgat
ttgccaattcacctggagggactgatgggagaggccaacattaaatttgctcaaggagat
catgataaagcaatatcaatttgcatggatattatcaagatggctccggaggcacacatg
ccttttcagacactgggtatgatttatgaggaccaaggagatctcaagaagtctttgcag
tacagtttgatagcagcgtatctgaatccagtagaccgtgacagttggatgagactggct
gatctatgtctggacctcggagataaacagcaggcaaccatttgttacagtaaagcacta
aaagctgcccctcagaatccaggtaacctggacatataccttagccggagtcagttgtat
gaagagttaggggagaagaagaaggcactggaggggtacaagtccatgctgaagataaca
ccccctcaggatggagagcgatacatggaaatagcaaggacaattactaagcattactat
gaagaagatgacaaggtatctgccatggaaaccatgagaaatgcatttgaggcgaactca
gagaatgtaacagcagaagatgtgaatttgttcatggagctattaatgacacagaaaatg
tttctgcaagccattgaggttttggtgaaccactgtggagttgtctttcatttaaacacg
gagagggaatggagtcaggaaatgaacctcagtatttccctcatagagaatggcactgtc
aaaatcaactctgttgccattcctgaactccttcccattgatttaagagtaaaactagga
atatgtctgatacagaacaaatatgactccttagcagagtttgtcatcacccagcttctt
caagaggatgttgatgaagtcggagacttgtatttagatgtagcagaagcttatatggag
cagaagtgtttcacagaagccaaaccaatcctggaacgactggtctgctcccagaactac
aatctggctgcagtgtggttacggctggctgattgcttgaactcgctgggggatctagag
ggagcggaggctgcatatagacaggtggtagagatggccccctcccacatcggggccagg
atgtccttgtctaccttacagtctcacctaggcaagcatgaggaggcactcaaagcactg
aacagggatgagtctgatgacttgctaaccaaacaggagaaatctttgctgctacataag
tgtatgctgctgtatgcacaaggaaaatttgatgattttcaccaagcatgtaaatctcta
ctgtttaacatgtacaaggatctgaataacccagacttcattaaagctgtttactgctgc
agatctcataagactaggaaagaaatgcttcaaggccatttcaaaccaggatataaagat
tcctcaaagtctgatattcctgttgatgatctgtgggatctattcattaagctttctgaa
ttgctgtttaacaacaaaagatatgaggatttattggaagtaacaacccttggaatgtct
tgtccttatttcatgatggaacctaggaaagtgaagcaagctgaattcatgagtttatta
ggctgtctactgaccaaaaatgaatattttgccttcagtcatattagggaaatatgcatt
aaggaaggacataaaagccaggcttggaatttactgaaccaagttttactgatagccaca
gaaaatagacataatagattctgtcttagatacctactgactaatccagatcatgcccca
gtaggtttactgaatggccacaatgcaacaatatcagggacatacaagtatgctctagga
gagtatgtagccgtgctgaggaagtgccctgaggatcccctggtcaatctctgcatcgga
ctcacctttatccacctggccggacagaagttctcctccaaaaaacattcactgtttaca
caaggactgacctttctaaacaactacatggagctgaggggagaatgtcaagagacttac
tacaatatgggccgagccctgcatcagctggggttgacatatgcagccgtccactattac
aagaaaggactaactttcccaccagttgttgatgatgaagagaaccgatttgacttgaca
ccacaactggcctacaatctgatgctgatctacaagaccagtggctcagaagttctcgcc
aaacacatcatgcagcgctacctggtgatatga
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