Crassostrea virginica (eastern oyster): 111122309
Help
Entry
111122309 CDS
T09197
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00061
Fatty acid biosynthesis
cvn00071
Fatty acid degradation
cvn01100
Metabolic pathways
cvn01212
Fatty acid metabolism
cvn04146
Peroxisome
Module
cvn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111122309
00071 Fatty acid degradation
111122309
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111122309
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cvn01004
]
111122309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111122309
Enzymes [BR:
cvn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111122309
Lipid biosynthesis proteins [BR:
cvn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111122309
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of breast milk
111122309
Exosomal proteins of breast cancer cells
111122309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
111122309
NCBI-ProteinID:
XP_022319691
UniProt:
A0A8B8CYW5
LinkDB
All DBs
Position
2:7921017..7946557
Genome browser
AA seq
705 aa
AA seq
DB search
MSQISLIQGGSLAVTMMIEKIRNMDYLKLLGAGAVTVAAVTTTTFYYLTSRPQPVSLPVS
LEDQTEEVDKNERSRMSRLCKDGKYLSTFEDKEVQTLHDAFKRGARVSSNGEAYGWKPSP
TEPFRWISYNDVLVRAANIGAGLIAKGLKPANTTNVGIYSQNRVEYGITEQACYMYSMVL
VPLYDTLGPEACTHIINQAEIKTVICDKNVKVKAVLGRIKETPDLQTIVVVEEPTAEVKE
LAKTSDIDLISFDELESLGEKNPQEPNPAKPDDLCVLCYTSGTTGLPKGAMLTHKGTMAT
IVAAAAILKPGGVDISPEDTLISYLPLAHSYERLLEGYCVLNGSRIGFFQGDVKLLLDDI
KELQPTLFPSVPRLLNRIYDKVMSQINSGSSLKRKLFNMALASKENELKKSIIRNDSLWD
KLVFKKIQASMGGKVKLITTGSAPLSPKVLHFLRCCVGCPIVEGYGQTECHAVCTVTLVG
DPDTGNVGPPMPCCEIKLADVEDMNYYAKDNKGEVCVKGPNVFLGYYRDKAKTEEALDKD
GWLHTGDIGQWLENGTLKIIDRKKNIFKLAQGEYIAPEKIENVYVRSPLVAQVFIHGESL
KSSLVGIVVPDPEVLPSWAKSNLNVSQTIEELCSNPDVKKEIMADLTKIGKSGGLHSFEQ
VKDIFLYPEQFSVENGLLTPTFKAKRHELKAKFKVEIDDMYKNLV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatatctctgattcagggaggttcattggcagtcacgatgatgatagagaag
atacggaacatggattacctgaaactactgggggccggtgcagtaactgtagcagcagta
accacgacaaccttctactatttgacaagtcgaccccagcctgtttcattaccagtctcg
ttagaggaccagacagaggaagtggataaaaatgagcggtcacgaatgtcacggctctgc
aaagatgggaaatacctgtccacatttgaagacaaagaagtgcagacgctgcatgatgct
ttcaagcggggagcccgtgtgtccagtaatggagaggcttatggatggaagcccagcccc
acagaacccttcaggtggatctcatataacgatgttctggttcgagctgccaacattggt
gctggtctaatagcaaagggactgaaacctgcaaacacaaccaatgtcggcatttattcc
caaaacagagtagagtatggcattacagaacaagcctgctatatgtactcaatggtcctt
gtaccactgtacgacacgttgggaccagaggcatgtacacacatcatcaaccaagctgag
attaagactgtaatctgtgataaaaatgtgaaggtcaaagcagtccttggtagaatcaag
gagacccctgacctccagactattgttgtggtggaagagccgacggcggaggtgaaggag
ctggccaagaccagcgacatcgatctcatctcttttgatgagttggagagtttgggtgaa
aagaatccacaagaaccaaatcctgccaagccagatgatttatgtgtactgtgctacacc
agtgggaccacaggtttaccaaaaggtgccatgttaacacacaaagggaccatggccacc
attgtggctgctgcagctatattgaaacctggtggcgttgatatttctccagaggacact
ctgatatcctaccttccattggcccattcctatgagagattactagagggctactgtgtg
ctaaatggatcacgaatagggttcttccagggtgatgtcaaattactgctggatgacatc
aaggaacttcagcctactctcttcccgtctgtaccacggctcctcaataggatctatgac
aaggttatgagccagataaattcaggatcttctctaaaaagaaaattatttaacatggcc
ttagccagcaaagaaaatgaactgaaaaagagtataataagaaatgatagcctttgggac
aagcttgttttcaagaagatccaggccagtatgggaggcaaagtgaagctgattaccaca
gggtctgcccctctctctcccaaagtcctccatttcttgaggtgctgtgtgggctgtcca
attgttgagggatatgggcagacagaatgtcatgctgtttgcactgttacattagttgga
gatcctgatacaggaaatgttggtccacccatgccatgctgtgagattaaattggctgat
gtagaggatatgaattactatgcaaaggacaataaaggggaggtttgcgtcaaaggaccc
aatgtgttcctggggtactaccgagacaaagccaagacggaggaggctctggacaaggat
ggatggctgcacaccggcgatatcggccagtggcttgagaatggtactctgaagattatt
gacagaaagaagaacattttcaagctagcccagggtgaatacattgctcctgagaagata
gagaatgtctacgtgagaagtcctttagtagcccaagtctttattcatggagaaagttta
aagtccagtctggtgggtattgtggtcccggaccctgaggtgctacccagctgggccaaa
tccaacctcaatgtttcacagacgatcgaggaattgtgctccaacccggatgtaaagaaa
gagatcatggctgatttgactaaaattggaaaaagtggaggacttcattcttttgaacag
gtgaaagatatatttttatatccggaacaattctctgtggagaatggactcctgactccg
acatttaaagcaaaacgacatgaactgaaagcaaaattcaaagtagaaatagatgacatg
tacaaaaatcttgtgtaa
DBGET
integrated database retrieval system
