Crassostrea virginica (eastern oyster): 111122336
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Entry
111122336 CDS
T09197
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111122336
Ion channels [BR:
cvn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111122336
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ion_trans
Ank_KRIT1
FERM_F2
Motif
Other DBs
NCBI-GeneID:
111122336
NCBI-ProteinID:
XP_022319765
UniProt:
A0A8B8CVT7
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Position
2:56330130..56373882
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AA seq
1046 aa
AA seq
DB search
MDEKEAMLQDIRDCSAEELERLLSAYPELKDKKDDHGNTLLLITARHDLLQLAQVLISHK
VDINEKNKHDGIAAIHEAARCGSVDVGFLLITSGCDVMNCDNRKKTPLHHAARRGQDKMV
ETLLRSSKLEIDARDENRLTPLHESIVNKHETTAILLVENGAEVTETETNRFTPYMMAAA
VELVGLMEKIWKTVLQKGGKSEAIKIVNTHDTLEKNSLLHIAVEKRCLKAVQEILKHGGS
VNAANDTGRTPLHLAAISGDLDIAMTLLSHGAAVNARDRDSFTPVHRACLSNQHKILNAM
MNKGGDVKIKTKDGMTPFILAASKGYLETVDYLFGNGDVISQTDNNQRNAIHWAVKNAHL
EVLSFLLQKSGIDIMEAIDDKEQTIMHYAAKLGNTAILEALIRQQCTLDTRDMKGRTPFH
VAAENDNSVALETLYHASDSELNEQDSEGQTPLLLAVKEGHYNIVKVLLSWGADIAIRDK
NLCSVIHIAARKGCINIIKILLEHDADINEKGENDNTPLHNACLEGHLKCVQLLLKNKAD
PLASNVFEETPLAVAVENSHTDIAVTFMHSKRWKKILLCRNSEKKTEVDKMIRNCPEAVE
VMMNNCTRTQDFQFIDPGPNDPMSKEQRYFAYETMLKFDKDSLLTHQLIQQYLFAKWFAF
GFIAHHLEVSMYLTFYGFFTGHMKSISLSESCRTFLNDSKASNQTGKNETTTDSYLMTDE
TTTDSYSMIDEVYNWSSTLYGLMLPIVLNILLFREIFMMRLKGYKYFLRPMNYVTITMLI
TSLISVFVDLSCEKGLRFAWIASLTALVNIMAVLRAYDIIGIYFVMLEEVLKSVLKIIFV
LGIILFAFYQAFSSIVTRNYDDKPHSPFVLFMTLGELNFFDEYFKDGNQSFYIDNYIAFL
LFFFIVSISMMNLMIGVAVGDIDAVKKTAFRERMAIQINYMSTVENCIPKNLQKRIYRNL
RFTRLEKMFYEFLQRFGYNTAFIRQEHDNVTETIHELKHEVEANRQHSMSFCNVLVIILH
SSARSTTTSQRQFTSLSMKSRPIDSK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaggaggcaatgttgcaggatatcagagactgcagtgcagaagagctggaa
cggttactgtcagcttatcctgaactaaaggataagaaggacgaccatggaaacactctc
ttactgatcaccgcgaggcatgaccttctacaattagctcaagtgctgatatcacacaaa
gttgatatcaatgaaaagaataaacatgacggcattgctgctatacatgaagcagcaaga
tgtggctccgttgatgtcggctttttgcttattacgtctggatgtgacgtcatgaactgt
gacaaccgtaagaagacaccactgcatcatgcggccagaagaggccaagacaagatggtg
gagactcttttgcgctcgtcaaagcttgagatcgatgcaagggacgagaacagactgacc
cctctacatgagtccatcgtaaacaaacatgaaaccactgcaatactactggttgaaaat
ggcgcggaagtgactgagacggagactaacagattcaccccttatatgatggcggctgct
gttgaactggtcggtctcatggaaaagatatggaaaacagttcttcaaaagggtggaaaa
tccgaggccataaaaatagtcaacacacatgacaccttggaaaaaaattcacttttacac
attgcagtggaaaaaagatgtctgaaggccgttcaggaaatcctaaaacatggaggcagt
gttaatgcggccaatgacactggtagaacaccactacatttggcagcaatcagcggtgac
cttgacattgcaatgaccttgctctcccatggggcagcagtgaacgcaagggatcgagat
tcctttactcccgtacacagagcatgtttgagcaatcaacataaaatattaaatgcaatg
atgaacaagggcggcgatgtcaaaataaaaacaaaggacggaatgactcctttcatcttg
gccgcctcgaaaggttatttagaaacggtggattatttgtttgggaacggggatgttatt
tcacagacagataataaccagagaaatgcgatacactgggctgtgaaaaacgctcatttg
gaagtcctctcgtttcttcttcagaaaagtggcattgacatcatggaggcaattgatgat
aaagaacagacaatcatgcattatgcagcaaaactaggaaacacagcgatacttgaagcc
ttgatccgtcagcaatgtacgctggacaccagagacatgaaaggccgtacccctttccac
gttgccgcggaaaacgataacagcgttgcactagagactctgtaccacgcaagtgactct
gagctgaatgagcaggatagtgaaggacagacgccattactactggccgtgaaggaggga
cactacaacatcgtcaaagtcctgctgtcgtggggtgcagacattgccatcagagataag
aacctttgctctgttattcatatcgctgcaagaaaaggttgcatcaacatcattaaaatt
ttactggaacatgatgctgacatcaacgagaaaggtgaaaatgataacactccccttcat
aacgcgtgcttagaaggacacctaaaatgtgtccaacttctcctgaaaaacaaagcagac
ccactggccagtaatgtctttgaggaaactccgctcgcggtcgccgtagaaaacagtcat
actgatatagccgttacctttatgcattccaaaaggtggaaaaaaatactgttgtgtaga
aattctgaaaaaaagactgaagtcgacaaaatgattcgtaattgcccagaagctgttgaa
gtcatgatgaacaactgcactcgaacgcaggatttccagtttattgacccgggaccaaat
gaccccatgagcaaagaacaaagatattttgcatatgagacaatgcttaagttcgacaaa
gatagtttgctcactcaccagcttattcagcaatacttgtttgccaaatggtttgcgttt
gggtttatagcccaccacctcgaagtttcgatgtatttaacgttttatggcttcttcact
ggacatatgaaatccattagcttgtcagagtcatgtcgaacatttctaaacgattctaaa
gccagtaaccaaacgggaaaaaatgaaacaaccacagattcctacttaatgacagatgaa
acaaccacagattcctactcaatgatagatgaggtctacaactggagttcgactttgtat
ggactcatgcttccaatagttttgaacatcttgttgtttagggaaatcttcatgatgcga
ttaaaaggttacaaatactttctaagaccgatgaactatgtgaccattacgatgctgata
acctcgttaataagtgtatttgtcgacctctcatgtgaaaaggggttgaggttcgcctgg
attgcaagccttacagcgctggttaacataatggctgttcttagagcgtacgacattata
ggaatatacttcgtcatgttggaggaagttctcaaatctgtacttaagatcatttttgtg
cttgggattatccttttcgccttttatcaggctttcagcagtattgtaactaggaattat
gatgataaaccacattcccccttcgtgctttttatgaccctaggagaattaaacttcttt
gatgaatacttcaaagatgggaaccaatctttttacattgacaactacatcgcctttctc
ctcttctttttcattgtttctatttcgatgatgaaccttatgataggtgtagctgttggg
gatattgatgctgttaaaaagacagcttttcgggagaggatggccattcagataaactat
atgagcactgttgaaaattgtattccgaagaatttgcagaaaagaatttatcggaatttg
agatttacaagattggaaaaaatgttctatgagtttttgcaacgttttggttataatact
gcattcatccgccaggagcacgacaacgtcacagagacaattcacgagcttaagcatgaa
gtcgaggccaatagacagcattctatgagtttttgcaacgttttggttataatactgcat
tcatccgccaggagcacgacaacgtcacagagacaattcacgagcttaagcatgaagtcg
aggccaatagacagcaaatga
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