Crassostrea virginica (eastern oyster): 111122350
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Entry
111122350 CDS
T09197
Name
(RefSeq) laminin subunit alpha-2-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04512
ECM-receptor interaction
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111122350
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111122350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
Laminin_G_3
Laminin_I
Laminin_II
F5_F8_type_C
3keto-disac_hyd
TS_C
Motif
Other DBs
NCBI-GeneID:
111122350
NCBI-ProteinID:
XP_022319794
EnsemblRapid:
LOC111122350
UniProt:
A0A8B8CX29
LinkDB
All DBs
Position
2:41444299..41493300
Genome browser
AA seq
3189 aa
AA seq
DB search
MIPVTRLVIVFGTLFLPAVKCQANVGLFPNILNLATRSTITVNATCGEEKSEVFCKLVDH
VKIFPDKNSHCDICDARSQDDRRRHPITNAINGRNSWWQSPTLTNGAVYNYVTITLDLKQ
VYQVAYVIVKAANSPRPGNWVLERSIDGVNFQPWQYFGVRNRDCKKLYGLKASRDIPRYL
KDDEVICTTKYSKIYPLENGEIFISLVNGRPGVKKPSPTLLEFTSARYVRLRLQKIRTLN
ADLMTFRSTSDLKFIDPYVTRRYFYSIKDISIGGQCICYGHASVCSPRPNTDRLFCECKH
NTCGNNCEKCCEFYYQKPWQPGNNGLKCEKCNCHGHSTECVYNATVDAMKLSLNTAGEYD
GGGVCIDCKDYTTGLNCERCVDGYYRPLGETPSSRFPCRPCRCEVTLGSTGKCVPDDRMM
SEGKRPGDCLCKEGYGGPTCQECALGYYGYPYCKPCPCNTAGTLSSRQCSGNCVCKENVE
GFKCDRCKRGFFNLNVDNPVGCMPCFCFGVSSVCQSANLGLIKIPEGVGDMSDGMSGWSV
TSTDIAGFTYFILKNDEGWLVYRAYPANQNSLNPSEGVVVYYWQAPLKYLGNRLTSYGGK
LRYTVKYETDRTVPYQRHMYGVDVIIQSGNMTIVNGKSYLREETQEERTVTLNETSWFQL
IKSDRYETLQPITKKEFMIILYNIERLLIRATYHSAQNSVYLRDVTIDAVSALSNSSNTL
KTVEKCSCPRGYQGLSCELCESGYRRVGNQLYGGMCLPCNCNNHAERCDINTGKCINCQH
FTTGENCDKCLPGYYGDPRRGQEDDCKPCACPLLEPTNQFSPSCQLIPQVGNYDNYKCDK
CAVGYTGDRCQRCAPGYYGDPTKLRGECRPCLCGGNIDTGNPNSCDRETGECLRCLNHTE
GRNCQRCQDGYYGTAVNGDCTACNCDLNGAVNGSCDQYSGRCICKDKFYGRRCDQCQPGY
GNVEEGCEPCDCDPTGSRGSVCDGRSGQCFCNVGITGRRCDKCQPGFYGFSSRGCRDCRC
NEQGTNQTEPCDDVTGVCNCQPNVMGTRCNTCQENSWGLDSGRGCTPCECDSLGSVYSQC
DQRTGQCTCRPGVEGQKCDQCAPGYYGFSISGCKRCQPCDKPGHVCDPNTGQCVCPPLTT
GPQCGECRPNSWGHDKVTGCKPCNCNLLTSESGQCDLVTGQCTCKADYTGEQCDSCSPGF
YNYPNCQLCLCSADGTELRSCDNTTGICQCDNTGQCQCKENVETRSCGRCRQGSFSLHRD
NPYGCTDCFCFERSNQCEQVPYIWKKIQIPDRSISFDPRVTENVTLEYKSYVVIPHNSTW
TAVPESLATRPVYWSLPERFLGDWTFSYNGEMRFKVSYRSDARPLLRTDDDSDVVVVGNG
FHMVHKTRTSWPQESEKSTTVKFHPTEWMVVGYGNATRSLMMIVLQNVTDVFIKASPDGH
PRTAMLTSVSVDSAQPGNGSTENPALGVEVCRCPPQYSGLSCQDPADGYYRLKHNITTDI
SQPIVVIGSVVPCNCHQHSDVCDRETGVCKNCQHNTTGSQCERCRPGFYGDATRGSAADC
QPCVCPSIDNNFSSTCEIRRGQLICTNCTEGYTGTRCESCAEGYYGNPRQTGGRCLPCDC
NPEGSVSSSCNFQGQCRCLPGITGDKCDGCQPRYAVEDGRCVSCDEGCTADLMRELDDLR
NLTLQVNLTGKLPVPWNQLWKIQNETILLKGELETIRNAELSHLKNQTNDLARQAESLLA
RSRRVKLQAGPLEEKAATLKKNATDVEADLNDTIKDMKDFVEKLVETVQTLFHNKSGINV
TAALQKVKGILKEIKDRDFNNSLERALRENKLAEKLSETILEMKKKMVNTTGVMEDIQAL
LERLQNLQTYSNQSQKQSDEVFTLINGISVMQNTTTDMVVELDKTHDELVAILVDGHQFN
IYGKDVLKHVKESMADIEQKASIFDQILPEVRKKVYEREAQMPEVERKVREAESHAKTLS
DYAEQLEREFNKTKADAADPLKAATVYSNIVKAVNEAEEAAKRAIKAAEDSIRIAGVQNI
TDEVSRSLNKSRELLKQAGKTLSKVPGLDKNLIALNQDLRRLEEEQSRIRQGQTDIKTTL
LQLPKDLEERALEIAEDVDKTSNKLQGLGDKVDDIDSNIKNDLIPKMNRIRDVRFNGIFE
NIENSIDKAKENVRKIGEIVEGVEAAANRTMTAESRLNNKLKMLRDNIKQARAQAEKVKV
SLSATGQCVRSYHSKSVPGVTNKISFSFKTNNTTNNQIILLLQKSPIEFLAVEMINAKIQ
FSWNVGAGVGKVTSDLPIQNENNFINTIDKWYHVKADRLGRIGTLEVSKLSNVNDAKKVT
GISQIGRSFLRLDKDSDLYVAGIPYGIDRSPELTSSANFSGCMNEMYIDDLKVGLHNFKT
TSKQGCGGCRNVPAANTEQTGMFHFSGSGYSAKPQVRSYRSTKFYIKMEFKTFWRDAILL
FTGNNKTGDFLYIGLQDQKLVLQIYTGGESYLSISSKKLYNDNKWHTVVSERDDLTAYLK
VDEDMTLDTAPGSNTGLELKGRPLYFGGIPESYDLEPFLKWGSINRTGFLGCLRQVQIEQ
FSQDLLTGETVGVTNGCPSEGYRTIGFYGNGFAKYKAASLPADKADISLSFRTTQEDALL
LLAYDNDQRNFYSFVLSGGKVEGRFSTNSLPKKITTSKTFNDGQLHNVAIQKIGKKITVY
VDDEAQLDEVTLIKEEVNIDHLYIGGVINFNFPQGQAMAATTQGLEGCVSDIIINQQILN
LNSPLQFERADIGRCSLPNTQQGPPGPQEAQTTKPPPTTTTTTTKAATTKAAVATTSVAP
ISCAGTPTLYQDILSLIFGNSEKSHGKIVINPQDVQESFQISFDFRTFFANGSVFLLTNA
NYTEYVAAQIIKGRVVVFWTNNGGKVKQSSSSKVVDDGQWHTAIVSKDRRRISLEVDGKT
EINKQRITKKLSVTSPLIVGSILDNMMINNDDLTRHSLRGCMRNFYVNTKKILIDQATEV
QGVTTCYLNMEPGIYMDKNSYGVIADRYSVGREMKIQLEFRTYKPNGIILSITDNHAVTL
ELHEGKVKFSVFNVDLFTVMSRDSDKICDNRWHSLEATLIRNVVKLVVDGGDPQYGSSEN
TARNVTTSSALYVGGVPDYAVKQVASFNQGDGVAEGFEGCLRNFKIDSTPVEWFSLIERQ
NIQRTGCPY
NT seq
9570 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcacccgcttggtcattgtttttgggactctatttttacctgcagtgaaa
tgccaagctaatgtagggttattccctaacattctgaatttggctacacgttctaccatc
actgtcaatgcaacttgtggtgaggagaaaagtgaagtattttgtaagctggtggaccat
gtcaaaatctttcctgacaagaactcgcattgtgacatctgtgatgcaaggagccaggat
gacagacgtcgacaccctattaccaatgcaatcaatggaagaaactcatggtggcaaagt
ccgactctgaccaatggagctgtctataattatgttaccattactttggatctcaaacag
gtttaccaggtagcttatgttatagtgaaggcagccaattctcccagacctgggaactgg
gttctggagagatccattgacggagtgaattttcagccatggcagtacttcggagtccgg
aatagagactgcaagaaattatatggcctgaaagccagccgcgatatccccagataccta
aaggatgatgaagttatttgtaccacaaagtactccaaaatttacccactggagaatgga
gaaattttcatatcacttgtcaatgggagaccaggagttaagaaaccaagtcccacacta
ctggagttcacatctgctcgttatgtccgattacgattacagaagataaggacactcaat
gccgaccttatgaccttcaggtcaaccagtgacctcaagttcattgatccatatgttaca
agaaggtacttttactccatcaaagatatctctattggcggtcagtgtatttgttatgga
catgcatctgtgtgttctcctcgacccaacacagatagactcttctgtgaatgtaaacac
aatacatgtggcaacaattgtgaaaaatgctgtgaattttactatcaaaaaccatggcaa
cctggaaacaatggcctcaaatgtgaaaaatgcaactgccatggacattccactgagtgt
gtgtataatgccactgtggatgctatgaagctaagcctgaatactgcaggagaatacgat
ggtggaggggtctgtatagactgtaaggactatacaacaggattaaactgtgagagatgt
gtggacggttactatcgcccacttggagagaccccctcctcccggtttccttgccgacct
tgtcgatgtgaggtcacactggggtcgacgggaaagtgtgtcccagatgaccgcatgatg
agtgagggaaagaggccgggagactgcttgtgtaaagaaggctatggaggaccgacctgt
caggaatgtgctcttggttactatggttacccgtactgtaagccttgtccctgtaacact
gcagggacgctgagctcgagacaatgcagcggcaactgtgtgtgtaaggagaatgttgaa
ggtttcaaatgtgaccggtgcaaacgtggattcttcaacttgaatgttgataatccggtg
ggatgtatgccttgcttctgcttcggagtgtcttctgtgtgccagtcagccaacctgggc
ctcatcaagattccagaaggggttggggacatgtcggatgggatgagcggttggtctgtg
acctccactgacatcgccggattcacctacttcattctaaagaacgacgagggctggctg
gtgtacagggcttacccagccaatcagaattcacttaacccctcagagggagtggtagtc
tactattggcaggctccactcaaatacctcggcaataggttaacatcatacggaggaaag
ctgaggtacacagttaaatatgagactgatcgcactgtcccttatcagagacacatgtat
ggagtggatgtcatcattcagagtggtaacatgacaatagtgaatggtaagagctatcta
agggaggaaactcaggaggagagaactgtgacactcaacgagaccagctggttccagctc
atcaagagcgaccgctacgaaaccctccagccaatcacaaagaaggaattcatgatcatc
ctctacaacatcgagagacttctgatcagggccacttatcactcggctcagaactctgtg
tacttaagagatgtgaccattgatgctgtaagtgccctgtccaatagctctaacactctg
aaaaccgtggagaagtgctcctgtcccaggggctatcagggtctctcttgtgagctgtgt
gagtctggataccgtcgagttggaaaccagttgtatggaggaatgtgtctgccctgtaac
tgtaacaaccacgctgaacgctgtgacatcaatactgggaagtgtattaattgtcagcat
ttcaccaccggggagaattgtgacaagtgcctgccaggttactatggagatcctcgaaga
ggacaagaggatgactgtaaaccatgcgcttgtcctctactggaaccaaccaatcagttc
tctccctcatgtcagctgatccctcaagtaggaaactatgacaactacaagtgtgacaag
tgtgctgttggctacactggggacagatgtcagagatgtgcccctggttactatggagat
ccaaccaaattgagaggagaatgtcgaccctgtttgtgtggggggaacattgacacaggg
aaccccaacagctgtgaccgggagacaggggagtgtctgcggtgtctgaaccacacggag
ggacgcaactgtcagcggtgtcaggacgggtactatggcactgctgtcaatggcgactgt
acagcctgtaattgtgacctgaatggtgccgtgaatggatcatgtgaccagtattcagga
cgatgtatttgtaaagacaaattttatggcaggcgatgtgatcagtgtcagcctgggtac
ggtaatgttgaggaggggtgtgaaccgtgtgattgtgaccccacaggatctcgggggtca
gtgtgtgacggccgcagtgggcagtgcttctgtaatgtaggcatcacgggtaggaggtgt
gacaaatgtcagccaggattttatggattctcatcacggggttgccgcgactgtcggtgt
aatgaacaaggaaccaatcaaactgagccttgtgatgatgtcacaggggtctgtaactgt
cagcccaatgtcatgggaacacgatgcaatacctgtcaggagaattcctggggtctggat
tctgggagggggtgcaccccttgtgaatgtgacagtctggggtcggtctactcccagtgt
gaccagagaaccgggcagtgtacgtgtcgaccgggagtggagggacagaaatgtgaccag
tgtgcaccaggctattacggattctccatcagtggatgtaaacgctgccagccctgtgat
aagccgggtcatgtgtgtgaccccaacactggacagtgtgtctgcccacccctgaccacg
ggaccacagtgtggtgagtgcaggcccaactcctggggtcacgacaaggtgacaggatgc
aagccttgcaattgtaatctgctgacttcggaatcaggacaatgtgacctggttacagga
cagtgcacctgtaaggcggactacacaggtgagcaatgtgactcgtgctcacctggtttc
tacaactacccgaactgtcagctgtgtctgtgtagcgctgacggcacggagctcaggagc
tgtgacaacaccaccgggatctgtcagtgtgacaacacaggacagtgtcagtgcaaggaa
aatgtagaaactcgatcgtgtggtcgatgtaggcaggggtccttcagtctccatagagac
aacccctacggctgtactgactgcttctgttttgagagatccaaccaatgtgagcaggtg
ccttacatctggaaaaagatacagattcctgacaggagcatttcgtttgatcctcgagtt
acagagaatgtgacactggagtacaaatcgtatgtggtcattcctcacaactccacttgg
acagctgttcccgagtccctagctaccagaccagtctactggagcctgccagagagattc
ttgggagactggacattttcttacaatggggagatgagattcaaggttagctacaggtca
gatgcaagacccctacttcgaacagatgacgattcagatgtagtggttgttgggaacggc
ttccatatggttcacaagactcgaacatcatggccacaggaaagcgagaaatctaccaca
gtcaagtttcatccaacagagtggatggttgttggctatggtaatgccacgcgcagtctg
atgatgattgttctacaaaatgtcacagatgtcttcataaaggcctctccagatggccac
cccagaacagccatgttgacctctgtgtcggtggacagtgcacaaccaggaaatggtagc
acagagaacccggccctgggggtggaggtctgtcggtgtcctccccagtactccggcctc
tcttgtcaggatccagcagatgggtactatcgtctgaagcacaacataaccacggatatc
tcgcagccgatcgtggtgattggatctgtggtgccctgtaattgtcaccagcattcagac
gtctgtgacagggagacaggagtgtgtaagaactgtcaacacaacacaacaggaagtcag
tgtgagaggtgtcggcctggtttctatggcgatgctacccgaggctccgctgcggactgt
cagccatgtgtctgtcctagcattgataacaatttcagcagtacatgtgaaatccgcagg
ggtcagctgatctgtacaaattgtaccgagggatacacaggaaccagatgtgaatcatgt
gcagagggttattatggcaatccacggcagactggaggcaggtgcttgccctgtgactgt
aatccggagggatccgtatcatccagctgtaacttccagggccagtgtcgatgtcttcca
ggaatcacaggagataaatgtgacggttgtcagccaagatatgctgtggaagatggaaga
tgtgtctcttgtgatgagggctgtacagctgacctgatgcgtgaactggatgacctgaga
aatctgacccttcaggtgaacctgactggcaagcttcctgtcccctggaaccagttgtgg
aagatccagaatgaaaccatactactcaagggcgagttggagacgatcaggaatgcagag
ctgagtcatttgaaaaatcagacaaatgacctggccaggcaggctgagagcctactcgct
cgatcaaggagagtgaaactgcaggcgggacctctggaggagaaagcagcaactctgaag
aagaatgccactgacgtggaggcggatctgaacgatacgatcaaagacatgaaagatttt
gtggagaagctggtggaaacagttcaaactctgttccacaataaaagtggaataaatgtc
actgcagccttgcaaaaggtcaagggcattctgaaggaaatcaaggacagagatttcaat
aattctctggaaagggctcttagggagaacaaattggctgaaaagttgtcggagacgatc
ttggaaatgaagaagaaaatggtgaatacaactggagtgatggaggatatccaggctctt
ttggaaagactgcagaatctccagacctactccaatcaatcccagaaacagtcagacgag
gtgttcaccttgatcaacggcatcagcgtaatgcaaaataccacaacggatatggtggtt
gaactggacaagactcatgatgaactggttgccattctagtcgatgggcaccagtttaac
atctatggaaaggatgtactcaagcatgtcaaggaaagcatggcggacatagaacagaaa
gcaagcatatttgaccagattttaccggaagtaaggaaaaaagtctatgaaagggaagct
cagatgcccgaggtggaacggaaagttagagaggctgagagccatgctaagactctatca
gattatgctgaacaactggaaagagagtttaataaaaccaaggctgatgcagcagaccca
ctgaaggcagccacagtgtacagtaacattgtaaaggctgtgaatgaagcagaggaggct
gccaaacgagctatcaaggccgcggaggactccatcagaatcgctggtgtgcagaacatt
acagatgaagtgtcccgttcactgaataagagcagggaactcctgaagcaggcaggcaaa
acactaagcaaggttccaggtttagataagaacttgattgccctcaatcaggatttgcgt
cgtctggaagaagaacagagcaggattcggcagggacagacagacattaagaccactctt
ctccaactccctaaagatctggaagaaagagctctagagattgcagaagatgtcgacaag
acatcaaacaaactgcaaggactgggagacaaggttgatgatattgacagtaacataaag
aacgatctcatccccaagatgaaccggatcagagacgttcgatttaatggcatctttgaa
aacattgaaaattccattgacaaagcaaaggagaatgtgaggaagattggggagattgtt
gagggagtagaggctgcagccaataggacaatgactgccgagtccagactcaataacaaa
ctcaagatgctcagggacaacatcaaacaagctcgcgctcaggctgaaaaggtgaaggtt
tccctgtcagccaccggtcagtgtgtcaggtcctaccactccaagtccgtcccaggggtc
accaacaagatcagcttctccttcaagaccaacaacaccaccaacaaccagatcatcctg
ctgctccagaaatcccccatagaattcctggcggtggagatgatcaatgctaagattcaa
ttttcctggaatgttggggcaggggtgggcaaagtcacaagtgaccttcccattcagaat
gaaaacaacttcatcaacaccatcgataaatggtaccatgttaaggcagacagacttggc
agaattggaacattagaagtgagtaaactttccaatgtcaatgacgccaagaaggtaaca
ggtatttcccaaatcggccgatccttccttaggcttgacaaggattctgatctgtatgtg
gcagggatcccctatggcattgataggtcaccagaattgaccagctctgccaatttcagt
ggatgtatgaatgaaatgtacattgatgatctgaaagtcggacttcataactttaagacc
acctcaaagcagggatgtgggggctgtagaaatgtgccagcagccaatacggagcagacg
ggcatgttccacttcagtggttctgggtattctgccaaacctcaggtccgatcgtaccgc
agcaccaaattttacatcaaaatggagttcaagaccttctggagggacgccatcttgttg
tttactggcaacaataaaactggagattttctgtatattggtttacaagatcagaaactg
gttctgcagatctatactggtggcgagagttatctttcaatttccagcaaaaaactgtat
aatgataacaagtggcatactgttgtttccgagcgagacgacttgactgcatacctcaaa
gtggatgaagatatgacactagacactgcccctggaagtaacactgggttagaattaaaa
gggagaccactttatttcggaggaattccagaaagctatgatttggaacctttcctgaag
tggggatctataaatagaactgggtttctcggatgtctgagacaagtccagatcgagcag
ttctcccaggatttactgacaggggaaacggtgggggtcacaaatggctgtccctcagag
ggctacagaacaataggattctatggaaatggatttgccaagtacaaggcagctagcttg
cctgctgataaggcggacatttctttgtcctttagaaccacacaggaagacgctctactg
ctactggcctatgataacgaccaaaggaacttttactcttttgtgttatctgggggtaaa
gttgaaggaaggttcagtaccaacagcctccccaagaaaatcaccacatctaagactttt
aatgatggacaactgcacaacgtagccatacaaaaaattggcaaaaaaataacagtgtat
gtagacgatgaggcacaactggatgaagtgactcttattaaagaggaggtgaatatagac
cacttatacataggaggtgtcataaacttcaacttccctcaaggtcaagccatggcagcc
actacccaggggcttgaggggtgtgtcagtgatatcatcatcaaccaacaaattctcaac
ctgaattcacctctacaatttgagagagcagacataggaagatgttctttaccaaacact
caacaaggtcctccaggcccacaggaagctcaaaccactaaaccaccacccaccaccacc
accaccactacaaaggcagcaaccacaaaagctgcagtcgccaccacttcagtggctccc
ataagctgtgcaggaactccaaccttatatcaagacatcctatcacttatatttggaaat
tccgagaagagtcatggaaaaattgtgatcaatccacaggatgttcaggagtcgtttcag
atatcttttgatttccggacattttttgctaatggatccgttttccttctgaccaatgcc
aattacacagagtacgtagctgctcagatcatcaaaggaagggtagtggtgttttggaca
aataatggtggaaaggtaaagcagtcttcctcatctaaagtagtggacgatggtcagtgg
cacacggcaatcgtctccaaggatcggcggcggatcagtttagaagtggatgggaagaca
gaaataaacaaacaaaggataaccaagaagttgtctgtaacctcacccttaattgttggc
agcatattagataacatgatgatcaacaatgatgatttgacaaggcatagtttacgggga
tgtatgaggaatttctatgttaacacgaagaaaatattgattgaccaagccacagaagtt
cagggggttaccacttgttatttgaacatggaacctgggatttacatggataagaactcc
tatggagtcattgctgatagatattctgtgggtcgagagatgaaaattcagctggagttc
agaacctacaagcctaatggtattattttgtccattacggacaaccatgcagtgaccttg
gagctgcatgaaggaaaggttaaattctctgttttcaatgtggacctcttcactgtgatg
tccagagattcggataaaatctgcgacaacaggtggcactcgctggaagccacactgatc
cggaatgtggtgaaattggtcgtcgatgggggtgatccacagtacggcagcagtgaaaat
accgcgcggaacgtcaccacctcgtcagctctctatgtaggaggggtcccagattatgct
gtgaagcaggtcgcctctttcaatcagggagatggagtagcagaaggctttgagggttgc
ctacgtaactttaagatagactccacgcctgtggagtggttctctttgatcgaacggcaa
aacatccagcgtactggctgtccatactaa
DBGET
integrated database retrieval system
