KEGG   Crassostrea virginica (eastern oyster): 111122502
Entry
111122502         CDS       T09197                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111122502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvn03041]
    111122502
Spliceosome [BR:cvn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111122502
 Complex B
    111122502
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 zf-CCCH_2
Other DBs
NCBI-GeneID: 111122502
NCBI-ProteinID: XP_022319985
UniProt: A0A8B8CWH0
LinkDB
Position
3:65084547..65090188
AA seq 243 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGXRCSRLHNKPTFSQTVLIENLYMNPQNTAL
TADGSHIQMDDTELQQFYDEFFEEVYVELEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEE
DAEKAVNELNNRWFNGRPVHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL
RRELYGRSRRKVRRSRSRSPPTRRSRSRSRERTRRSRSRERRSRSRSRERRRSRERDGRH
GRY
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcggaatatctcgcgtcgattttcggcacagaaaaggacaaagtcaactgttcgttt
tacttcaaaattggggcttgtcgacatggangaagatgttcacgtcttcacaataaacca
acctttagccagactgtccttattgaaaatttatatatgaatcctcaaaacacggcactc
acggctgatggatctcatatccagatggacgatacagaattacaacaattttatgatgaa
ttctttgaagaagtttatgtagaattggaaaagtatggagaaatagaggagatgaatgta
tgtgacaatttgggtgaccatctggttggaaatgtgtatgtgaagtttcgctatgaggag
gatgcagaaaaagctgtgaatgaactgaacaatcggtggttcaatggccgtccagtacat
gctgaactttcaccagtgactgacttcagagaagcttgttgtcgacagtatgagatgggt
gagtgtacacgtggaggcttctgtaattttatgcacttgaagccaatatccagagaacta
agacgtgaactgtatggaagaagccgtagaaaggtcagaaggtcccgttcaagatcacca
ccaaccagacgcagtagaagccgtagcagggagcgcaccaggcgttcaaggtctagagag
cgcaggtcaaggtcgcggagtagagagaggaggaggtcgagggagagggatggacgacat
ggcagatactaa

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