Crassostrea virginica (eastern oyster): 111122629
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Entry
111122629 CDS
T09197
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111122629
Membrane trafficking [BR:
cvn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111122629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
Motif
Other DBs
NCBI-GeneID:
111122629
NCBI-ProteinID:
XP_022320159
UniProt:
A0A8B8CY38
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All DBs
Position
3:55351031..55374540
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AA seq
1041 aa
AA seq
DB search
MEDAVSRSSVESSSTNDDYVVVNGEPKLKITGDINDLNDEVSQSSKKMTSTLTPSSSIGA
DPQSPLSSVDNVFPTSQSTGAIGEEPGSGDCKGRSMSLPGSRDDGYTTFNGVTYLGCALV
NAPRSEVEIYRNMSILNEQSKQAIPIELYIPRTSEGNVRTNGVVRLVDPGTDTDIACYKI
HRILFCARGPADSEEKMCFAFTCSHGDTPDSAIFQCHVFRCELQEAVAKILYSFATSFRR
LPKTSVRSASSISEAEVTAIFSVNLEFKEDDGKGSYSTCPKDKNIFKFRCDYDKKIVISV
TQTGNKELRIERCFGLLLSPGRNVKDGDMHLIEMNSMGYSSDGRTYSISGNWDISEDCFK
VLNSETPKDTRVFLTVAVDLVICGIQEPVRFGIETKAKIFPHNERFWYFTKKPHQEQFFV
KLKLNCGIGMPKTETDSPDVVQYEVVEVHSQTQIDRQKAGLSLQGLKHNRRMSEGLQSPQ
DAEEESDGDEPLLSGSGVVSKEVTDDNLLEAWHDVLVKWHQNLSQRPKPVQQLAKKGIPE
ALRGEVWQLLAGCHDNSELMEAYRILITKDSPTESVIQRDINRTFPAHAFFKQSGGLGQD
SLYRISKAYSVYDEEIGYVQGLSFLAAALLLHMPEEQAFSVLVKICFDYELRDLFKQGFE
VLHLKFYQLERLMQDLMGDLYEHFMEMGLEIHMFASQWFLTLFTAKFPLFLVFHILDLFL
CEGKDIIFNVAIALLKMSRKDLLALDFEGILKYFRVHMPKKYRTEEAARELMATAVAAKV
TSKKLKKYEKEYITMKEQEMQQEDPIERMERENKRLLEDNMRLEQENDDLAHELVDSKLT
LKSELDEVQDQNKEMKTDLTKCRKLLKDTQEEKHRLEVENQQVKEMCRKELERLESENSR
NTVIVTDYKQICTQLSERLEKQQTAHREELSRIKTLVKSCETCSKMFDAEGKLNLPEPKT
DPEKMNPKIVDLQQQIRELELQLAQTKLALVESECKTQDLTHSLNAAVTEIQASKNTWFT
KTLNSIKEVANTHTAKKDPKD
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgctgttagtcgcagttctgttgaatcttcctccaccaatgatgattatgta
gttgtaaatggagaacccaagttaaaaatcacaggtgatattaatgatcttaatgatgaa
gtgtcccagtcctctaagaagatgacctccactcttaccccctcaagctctataggggct
gaccctcagtctccccttagctctgtagataatgtgtttcccaccagccagtccactggg
gccattggtgaagaaccaggatcgggggactgcaaaggaaggtcaatgtctttaccggga
tccagagatgacggctacacgacgttcaatggagtgacctaccttggttgtgctctggtg
aatgccccacgcagtgaggtggaaatctatcggaacatgtccatactaaatgagcagtcc
aagcaagccattccaatagagctatatattcccaggacctcagagggaaatgtcagaaca
aatggagttgttaggttagttgatccagggacagacacagatattgcctgctacaagatc
catcgcattctgttttgtgccaggggtccagctgatagtgaagagaaaatgtgctttgct
tttacatgtagtcatggtgacacaccagattctgcaatattccagtgtcatgtgttccga
tgtgaactccaagaagctgttgcaaaaattttgtactcatttgcaaccagttttcggcga
ttacccaagacgtctgtgaggtcagcttcaagcatcagtgaagcagaggtcactgccata
tttagtgttaacctggaattcaaagaggatgatgggaaaggaagctacagcacgtgtcct
aaagacaagaacatttttaagtttcgttgtgactatgataagaaaattgtgatatctgta
acgcaaactgggaacaaagaacttcgaatagaaaggtgttttgggttacttttgtcacct
ggtcgtaatgtcaaggatggagatatgcacctcattgagatgaattccatgggatattcc
agtgatgggagaacttactcaatttctggaaactgggacatttctgaggattgctttaaa
gtcttaaactcagaaacacccaaagatacccgtgtgttcctgactgtagcagtagattta
gtcatctgtgggattcaggaacctgtgaggtttggcatagaaaccaaggcaaaaatattc
cctcacaatgaacgattttggtatttcaccaagaaaccccaccaagagcagttctttgtc
aagttaaaattaaattgtggaattggaatgccaaagactgagacagattcacctgatgtt
gtgcaatatgaagtagttgaggtccatagtcagacacagatagatagacagaaggctggc
ttgagtctgcaaggcttgaaacacaacagacggatgtcggaggggctacagtccccgcag
gacgctgaggaggagtcagatggagacgagcccttattaagtgggtcaggtgtggtcagt
aaggaagtgacagatgacaacctgttggaggcatggcatgatgtcctcgtcaagtggcat
cagaatctttctcagaggcccaaaccagtccaacaactggcaaagaaaggcattcctgag
gccctccgaggggaagtctggcagctgctggcaggttgtcatgacaactcggagcttatg
gaggcctacagaatccttataaccaaagactctccgacagaaagtgtcattcagagagac
atcaataggacattccctgcccacgcattcttcaagcagtctggtggactagggcaggac
tccttgtacagaatcagcaaggcttactctgtgtatgatgaggagattggatatgtacag
ggcctctcctttctcgctgctgctcttctcttacatatgccagaggagcaagctttctca
gtgctagtgaagatctgttttgactatgaactcagagatttattcaagcaagggtttgaa
gttctccatttaaagttctaccagttggaacggttgatgcaggatctgatgggtgacctg
tatgagcatttcatggagatggggctggagatccacatgtttgcctcccaatggttcctc
actctcttcactgccaagttcccactgtttcttgtctttcacattctagatctttttctt
tgtgagggaaaagatataatttttaatgtagcaatagcacttttaaagatgtctaggaaa
gatttgctggcattagactttgaaggtatattgaagtacttcagggttcacatgcccaaa
aaatatagaacagaggaagctgctcgggaacttatggctactgcagtcgctgcaaaggtg
acaagtaagaagctgaaaaagtatgagaaagagtacattacaatgaaggaacaagaaatg
caacaagaggaccccattgagagaatggagagagaaaacaagcgactgctggaagataac
atgagattagagcaggagaatgacgacttggcacatgaacttgtagacagcaaacttaca
cttaagagtgaactggatgaggttcaagaccaaaacaaagaaatgaaaacagatttgaca
aagtgcagaaaacttttgaaggacacccaggaggagaagcaccgtttagaggttgagaat
caacaggtcaaggaaatgtgtaggaaagagttggagagactagaatcagagaattccaga
aacacggtcattgtgacagactacaaacagatttgtacccagctgagtgaacgactagaa
aaacagcaaactgcccaccgagaagagttgtccaggatcaagacattagttaaatcctgt
gaaacctgttctaaaatgtttgatgctgaaggaaaattgaatttaccagaaccaaagaca
gaccctgagaaaatgaatcccaagattgtagacttacaacaacagattcgtgaactggag
ttgcagctggctcagaccaaactggctctggtggagtccgagtgtaaaacgcaggacctg
acgcattccctgaacgccgccgtcaccgagatccaggcctccaagaacacctggttcacg
aagactctcaactccatcaaggaggtggcaaacactcacacggccaagaaagaccccaag
gactga
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