Crassostrea virginica (eastern oyster): 111122706
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Entry
111122706 CDS
T09197
Name
(RefSeq) glycine receptor subunit alpha-2-like isoform X1
KO
K05194
glycine receptor alpha-2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111122706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111122706
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Glycine
111122706
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
RDD
Motif
Other DBs
NCBI-GeneID:
111122706
NCBI-ProteinID:
XP_022320287
UniProt:
A0A8B8CWP9
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Position
3:58270217..58297724
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AA seq
428 aa
AA seq
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MVLLIVATALCTCLAALLRPVSGDITMFSNARFVSRAFGIYFLCMVAMGYAENASGKENI
LTEIFSEYDGKIPPNYDNDIPVKSSVQFYIIGIDSINEATMDFSMTFFVRQRWVDKRLNY
TPVFNMTRLELDTRRMADVWVPDLYFVNEKKADVHQVTVPNKLMHIYPDGLVVYSMRVTA
TFSCTMDLQKYPLDDQRCNIILESYGYSTETLLMRWHQTPVEKSDNLQLPQFDLQNITEY
ICDVTYASVTYTCLKLELYLHRNLGYYIIQVYVPSVLIVILSWVSFWLNVDSTPARISLG
LLTVLTMTTQSQGAKASLPRVSYVKAIDIWMSTCLFFVFAALIEFAYVNVLSRVDQRRGK
SVMSNMNEAKEEDDEKEKGKLCCFKNLEDRERARLVDKISRLLFPAIFVIFNIVYWLVYV
FWEPSPAP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtgctattgattgtggccacggcgttgtgtacatgtctagctgctctcctacgccca
gtcagtggagacatcaccatgttcagtaatgcgcgttttgtttccagggcctttggcatc
tattttctttgcatggtcgctatgggttatgctgagaacgccagcggaaaggaaaacata
ttgacagaaatattttccgagtatgacggcaagattccacctaactatgataatgatatt
cctgtgaaatcatcagtgcagttttatataattggcatcgactcgattaacgaagctacg
atggacttttcaatgacatttttcgtacgacaacgatgggtggacaagcgactgaactac
acgccggtatttaacatgactcgactggagctggacacgaggcgcatggcggacgtctgg
gtgcccgacctctacttcgtcaacgagaagaaagcggacgttcaccaagtcacagttccc
aacaaactcatgcacatctatcccgacggtctggtagtatacagcatgagggttactgca
accttctcctgtaccatggaccttcaaaagtaccccctggacgaccagagatgcaatatt
attttggaaagctatggctacagcacagagaccttattgatgcgttggcaccagacccca
gtcgaaaagtcggataacctccagctgccccagttcgatctacagaacattactgagtac
atctgtgatgttacgtacgctagcgttacctacacgtgtcttaaactagaactttatctc
catcgtaacctcggatactacattattcaagtttacgttcccagtgtcctcattgtaata
ctatcctgggtttccttttggttaaacgtggactccactccagcccgaatttccttagga
ttactgactgtactgaccatgacaacccaaagtcagggagccaaggcctcgctgcctcgg
gtctcctatgtcaaggccattgatatctggatgtctacctgtttattctttgtcttcgcc
gccttgatagaatttgcctatgtgaacgtgttatcaagggttgaccaacgaagaggaaaa
tcggtgatgtcaaatatgaatgaagctaaggaagaagatgacgaaaaggaaaaaggaaag
ttatgttgtttcaagaaccttgaagatcgggaacgtgcacgattggtagacaaaatatca
cgtctgctatttcccgccatatttgtgattttcaatattgtttattggttagtgtacgta
ttttgggagccatcgccggccccgtga
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