Crassostrea virginica (eastern oyster): 111122838
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Entry
111122838 CDS
T09197
Name
(RefSeq) condensin-2 complex subunit D3-like
KO
K11491
condensin-2 complex subunit D3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111122838
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
111122838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
HEAT_2
Adaptin_N
HEAT_EZ
Cohesin_HEAT
Cnd3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
111122838
NCBI-ProteinID:
XP_022320586
UniProt:
A0A8B8D1C8
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All DBs
Position
1:58623210..58643276
Genome browser
AA seq
1640 aa
AA seq
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MASLPKTIERISAFSLQNLSEEWVKSCWDCDFAEFPPLEALTEADIVENEHHVPNLYSLS
SVMDEWISKKEGQEGEGFWMVLVENDFSHKSLIALLAYLVETGSKRGSNVLQREAAILSA
SNYFKLLTIPGSTAFKVFHPVLFENCVNILKQWNMSGAGKRKKSISPACSQKRKKNKGNK
SQKSRDSSENIEEFLDDTNEEEDLSPQEINKLAKLYMSLLQDLIGLLLLSSLRQSESSVY
HTVQVLCTLTRQAPEIFDGNFQNFTNCEKNQLKSLPTAGLAYKGLQLLSLPLHGHVNTVI
NAICKCLLPNLLMLIGDNRVAAQSIPRPVLMAGEQAVNFIIYLMKNEARSFSSIRTLLQH
LCTKVTDRAEYRTKVAQAVVSILHEMPSGPFGKMVEWFYRLSKHSKMSNRAFTIDIVSLL
LSSPEREIDDNTPPEMASYVRHTSLLGILLDRCSDAAPTVRSRAIAAFSQCFTTTDSGIK
TTLKEMVTPVVGPRPAHIQHLIPTPEMEGRAQPVVEMTVNENTIDKTAENAQPRENNDET
PVNAPPRLPPKTPFHQVVLTPFNPNLPDEQGVLSMLRRRARDEKVQVRKAALQALECVVR
FEAPDYRRQDLDVLVERCRDPALSVRKQAMQSLTDLLLSMPAEKPLQKYWLDGVLPLVID
RETTLQEKCMETLEEILLRNVVPFNRSKDEGHRLVWNILDIMTQFESCDLRRYLQKACRH
WARVRKIKPSLITSLESHVGTANNQSAWMLLAELAPAVQKFSHGFILDYWEKHDNSTEEV
EFYTLQRVLLVMGCCAKHIAADRRDLLIENLKDRLKKFDSPPELISITINTLSKLCEAKA
ESLGLASEREAWCSDLLTSSDKYLSKVILQQDAGVLDEDLVIRHLFTLGEIAQLCPAKTP
KRVYLIVQSMVAAPCISMALRRPWPPLKVSPEHWVSGSSHDSSHGNHSGESNQNAEAHTS
GSSQQTQFTQFTQLSQFRGSRMSNRIRAFAFIALGKLCLQNPDLAKKCVAALARELEISP
DPTIRNNIVIILCDLCVRYTTTVERYMPSIGACLKDEAPLVRKQTLILITRLLQEDFLKW
KGALFFRFITTLLDEKKEIAEFAEYCLIHILLQRKPAMFSNHFMECIFHFNAYEGHSAYN
KFTQNEREKKMFSLQGTAKESDRLKLYCFMLEHMTDEQRFQITAKICTEILGGIVDNVIA
LDNNSSALLKDALAILSCKEIKLSSLKTKPQEDAGGDEQEMAAIVIATAKKTLISQVVKK
NVIENIIPIVVSLKHMLEKHRSPVLRDLMYYLRELMQDYKSEVKDILSADRQLAKEIEFD
LRKFEEEQEEMRRQEDQQNTVQGPQGTPRSSPRPVTAGPVSKSPQITPLARPPGAAPSPT
RSPLAQKQGSSGSPAPILQLNKSAAGPKEIARDHSLSTLAILNSARKAFLRAQENSPSGS
VKKASRKSCLATEDKSAGEEDGTGPLTVRFSDDLPSGSPTDSVSTPPRALRSSNRAISTP
SGVLDNITFHIDQNVTLIPPSPIPSSIPIRVYPADSSSASPTCMKKKGDKPDKDFIYMFS
PDKPLPKPRKWNVTSPAPLPKKNLSLQTDEDDISSLSKSDSENSTEQVTKGKRSRTKTAK
EKSGTADVVRRRSTRKTRNK
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctcccaaagacaattgaaagaatttcagcattctctctgcagaatctaagt
gaagagtgggtgaaatcttgctgggattgtgacttcgcagaatttccgcctttagaggcc
ctcactgaagccgacattgttgaaaacgagcatcatgttccaaacttgtattccctatca
tccgtcatggatgaatggatcagcaaaaaagagggacaagagggggaaggtttttggatg
gttcttgttgagaatgacttttcccacaaaagcttgatagcactattggcttatttggtg
gaaacaggctccaagagggggtcgaatgttttacagagagaggcagccatcttgtcagca
tcaaactatttcaagctgttaacaattccaggaagtacagcattcaaagtcttccatcct
gttttgtttgagaattgtgtgaacatcttgaagcagtggaacatgagtggtgcaggtaaa
aggaagaagagcatttctccggcttgcagtcaaaaaagaaagaagaataagggaaacaaa
tcacagaagtctagagactccagtgagaacattgaggaatttcttgatgacactaatgag
gaggaagatctctcacctcaagaaattaataagctggccaaactctacatgtcactcctg
caggacttgattggtctgttgctgttgtcgtcactgaggcagtctgagtcctcagtctac
cacactgtacaggtgctctgtacgctaaccagacaagcaccagaaatctttgatggcaac
tttcagaatttcactaattgtgagaaaaaccagctgaagtcacttccaacggctggcctg
gcatacaagggtttacagcttcttagtttgcctcttcatggacatgttaatactgttatc
aatgcaatctgtaaatgtctccttcctaacttgctgatgttgataggggacaatcgagtg
gccgcccagtctatacccagaccagtgctgatggctggggagcaagctgttaactttatc
atctatctgatgaaaaatgaggcccgttctttttccagtataagaacgcttcttcaacat
ttgtgtaccaaagtcacagaccgtgctgaataccgcacaaaagtggctcaggcagtggtc
agtattctccatgagatgcctagtggaccatttggtaaaatggtggaatggttttaccgt
ctctcaaagcattctaagatgagcaacagagctttcaccattgacattgtttctctcttg
ctgagttcaccagaaagggaaatagatgataacactccaccagaaatggcctcttacgtt
cgacacacgtccctgctgggaatcctattagacagatgttctgatgctgcccctactgtt
cgttcccgggcaattgctgctttctcacagtgcttcactacaactgactctggcataaaa
accactctaaaagagatggtaacccctgtggtaggccccagaccagctcacatacaacac
ctaatccctacgccagagatggagggcagagcgcaacctgttgttgaaatgacagttaat
gaaaataccattgacaaaacagcagaaaatgcacagcctcgagagaacaacgatgaaacc
cctgtcaatgcaccgccaaggttgccccccaaaacaccattccatcaagtggtcctaacc
ccattcaatccaaacctgccggatgaacagggcgtcctgtccatgctgagacgcagagct
cgagatgagaaggtacaagtgaggaaggctgctctacaggctctggagtgtgtagtcagg
ttcgaggccccagattacagacgacaggacctggatgtgttggtggagagatgccgagat
ccagctctctctgtcaggaagcaagccatgcagagcctgaccgacctcctgctgtccatg
ccagcggagaagcctctgcaaaaatattggttggatggagttctcccccttgttattgac
cgagagacaactctccaagagaagtgcatggagacactggaggaaatcctcctgagaaat
gttgtaccattcaacagatcaaaagatgagggacatcgccttgtttggaatattttagat
attatgactcagtttgaaagttgcgacttaaggcgatacctccagaaagcttgtcgacac
tgggcaagagtcagaaagatcaaaccaagcttgataacatccctcgagtctcatgtcggt
actgcaaataaccagtctgcctggatgcttctggctgagctggccccagcagtccagaaa
ttcagccatggatttatcctggattactgggagaagcatgacaacagcacagaggaagtc
gagttctacacgctgcagagagtcctgctggttatgggatgttgtgctaaacacattgct
gctgatcggagagacttgctgattgaaaacttgaaggacagattgaagaagtttgattct
cctccagaactcatctccatcacaatcaacactttgtccaagttgtgtgaggccaaggca
gagtccttgggattagccagtgaaagagaggcttggtgctctgaccttttgacctcgagt
gacaagtacctgtccaaagttatccttcagcaagatgctggtgttctggatgaggattta
gtaatacgtcacctgttcactctgggtgaaattgctcagctgtgtccggccaagacacca
aaacgggtgtatctgattgtccagagtatggtggctgccccttgtatcagcatggcccta
cgcagaccctggccccctctcaaggtatctcctgaacactgggtcagtggatcatcacat
gatagttctcatggaaaccacagtggagaatccaatcaaaatgccgaggcccatacatct
ggatcctcccagcaaacacagtttacccagttcactcagctgtcacagttcagggggtca
aggatgtccaataggattcgagcatttgcttttattgctttaggcaagttgtgtttgcag
aatccagacttggcaaagaaatgtgtagctgctctggctagggagttggagatttctcct
gacccaaccatccgtaacaacattgtcatcattctctgtgacctatgtgtcaggtacacc
accacagttgagcgttacatgcccagcataggagcttgtttgaaggacgaagctcctctt
gtccgtaaacagaccctgatcctaatcacccgacttctgcaggaggactttttgaaatgg
aaaggagcgttgtttttccgctttatcacaactctgcttgatgaaaagaaagaaattgca
gaatttgctgaatactgccttatccatatcctgctacagagaaagcccgccatgttttct
aatcacttcatggagtgtatctttcacttcaatgcctatgaggggcactcagcttacaac
aagtttacacaaaatgagagagagaaaaaaatgttttctttgcaaggaacagcaaaagaa
agtgacagactgaagttgtattgtttcatgctggaacacatgacagatgaacagaggttt
caaattactgccaagatatgcactgagattttgggaggaatagttgataatgtaatagca
ctggacaacaacagctctgctttactcaaggatgccctcgcaatcctaagttgtaaggaa
ataaaactgtcttccttgaaaacaaaaccacaagaagatgcaggaggagacgagcaggaa
atggctgccatcgtcatagcaaccgccaaaaagacccttatatcacaggtggtgaagaag
aatgtcatagagaacataatacctattgttgtctccctcaaacacatgcttgagaagcac
aggtcacctgtcctgcgagatttgatgtattacctgagggagctcatgcaggactataag
tcagaagtgaaggatattctgtctgcagatagacagcttgccaaggagattgagtttgat
ctgagaaaatttgaggaggagcaggaggagatgaggagacaggaggaccaacagaacact
gtacagggacctcagggcacccctagatccagtccaagaccagtgacagctggacctgta
tcaaaatcccctcaaattacccccctagcacggcccccaggggcggctccatctcccacc
cgcagtcctttggctcagaaacaaggctcatcaggttcccctgcccctatccttcagttg
aacaaatcagctgctggtccaaaggaaattgcaagggatcattcattatcgactctggct
atcctgaactcggctagaaaggccttcttgagagctcaagagaacagcccctctggttca
gtgaagaaggccagcaggaaatcatgccttgcgacggaggataaatccgctggggaggag
gatgggactggtcccctgactgtcaggttttcagatgatttgccttcaggcagtcccaca
gacagtgtatcgactccccccagagccctgcgctcctccaatcgggctatcagcacccct
tcaggtgtgttggacaacatcactttccatatcgatcagaatgtgaccctgattcccccc
tcccccatcccgtcttccatcccgatcagggtgtatcctgccgactccagctcagcttct
cctacttgcatgaagaaaaagggagacaaaccagataaggattttatctacatgttctcc
cctgacaaaccactgcccaaacccagaaaatggaacgtcacctcccctgcacccttacca
aagaagaatctttctttacaaacagatgaagatgatataagttcgttgtcaaagtcagat
tctgaaaattcgacagaacaggtgaccaaaggtaaaaggtcaaggacaaaaaccgcgaaa
gaaaagtcgggcacagcagatgtagtgagacgaagatcaaccaggaaaacaagaaacaag
tga
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