Crassostrea virginica (eastern oyster): 111122895
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Entry
111122895 CDS
T09197
Name
(RefSeq) putative protocadherin beta-18
KO
K16498
protocadherin delta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111122895
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111122895
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111122895
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111122895
Cell adhesion molecules [BR:
cvn04515
]
Cadherins
Protocadherins
111122895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
111122895
NCBI-ProteinID:
XP_022320634
UniProt:
A0A8B8D1H9
LinkDB
All DBs
Position
3:63474849..63505042
Genome browser
AA seq
1094 aa
AA seq
DB search
MAALFLLCALSVFGTFSTAKDIVADFIINEGSPPGYKIGSIPAKSNLIQKANLSSVVFNS
LTYTFLETDHEYTRLFRIEDSNGDLLLSTAIDRENIQCKDPQCILTFDVGATDGSAFIII
TVNVQINDINDNSPTFPEPVITINISETASIGYVVQLPTAEDKDTGENNGVQGYTVYPAN
GTFGLQTSKKLDGSFDVKLVLNERLDREKTAKYICQVFAKDGGTEQNTGSLQVNINVLDE
NDNPPVFSEPIYNVTVLENTPPGRVILTVTATDIDSGLNGEVEYHISQNAYSDIFSINTQ
MGEISLLKTLIYEPDEIYSFFVEAVDKGAIPNYAQVKVYIQIKDAGNNPPTVKVNLVSGS
NGTVSISELISVEAFVAHVSVDDSDTGENGRVECSITSSAVFFGIEPMNRGYKVVVKTPL
DREKASQHNVTVACHDFGSPALTSSQSFIVKVVDENDNKPVFSQPVYFASIEENNPVGVT
VTKVSATDYDIDSNAQILYVLHSDAGSSFSINRITGVINATGVLDREVTSDYLFRVLAVD
GGKEPKTGTATVVVNITDINDNRPKFTESLFTLEVSELSPPYTQIGSVTAYDPDLGQNAY
LQYSMSSQDRNVPFQVLQNGTVITRAELDREYQSQYNFMVYARDSGNPSLNSSAYVTVYV
TDANDNEPQILFPNKMNNTVSSTVTSLPITKVIAEDKDEGINRQLTYFIQSGDDKNMFNL
HSQTGELFLNPNFKFTTDQSVSLIICVKDNGLPVKSACTQLNVEVSINNVTISNQKPEAD
NKYIYISIGVIIFTIVISVGIVVVILVIRKKDHQRKKYKASPGPLGVPMQNGYTPASAPA
LPNPGSEEEFMERKKVTFGPGTTREGVNPSYSSNISQNNLYDKPPSYSSLKPDAKIEAMN
ALKLQQILLKKDNQVVTSGRAHPSDSNSDTSGETTTSDSGRGGSEDDNPSTAHTADDSRS
FDFYNNQSMSPVSFTSSLPRKDSKPPRPPPCHMPSSSEKRHSAVSYNSAHMPYSPPISFS
SHNNSDPWDYVKSPYYSSVHKDYFNLGGGGSLISTTKSRDDDDDAATTTSGSYTINPEDL
DDDLNYRCSNDFVV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctcttcctactgtgtgccctttctgttttcggaacattttccaccgccaaa
gatattgttgctgattttattatcaatgaaggaagtccaccaggatacaaaattgggagc
atacctgcaaaaagcaatctcattcaaaaggcaaatctctcctcggtagtcttcaatagt
ttgacctatacatttcttgaaacagatcatgaatacacacgtctatttagaattgaagat
tcaaatggagacttgttgttgtctacagcaattgatagagaaaacattcaatgtaaagat
cctcaatgtattttaacatttgatgtgggtgcaacggatggttcagcttttattattatc
acagtaaatgttcaaatcaatgacatcaacgacaactctccaacctttcctgaacctgta
ataacaatcaacatttcggaaacagcaagtattggctatgttgtccagctaccaacagca
gaggataaagatactggggagaacaatggggttcagggctatacagtctatcctgccaac
ggaacctttggacttcaaacaagcaaaaaactggatggaagtttcgacgttaaattggtc
ttgaatgagcgactggacagagagaaaacagcaaaatatatttgtcaagtttttgccaag
gatggtggaacagaacagaacacggggtcattacaagtaaatataaatgttttggatgaa
aatgacaatcctcctgtgtttagtgaacccatttacaatgtgacagtactggagaatacc
ccgcctggtcgagttattctgacagtgacagccactgacatagacagtggtctgaatgga
gaggtcgagtaccacatcagccaaaatgcctatagtgatatcttctccattaacacccag
atgggtgaaatttcgcttcttaaaactttgatatatgaacccgatgagatatattccttt
tttgtggaggcagtggacaaaggagctattccaaattatgcccaggtcaaggtttacata
cagatcaaggacgccgggaacaaccctcccacagtcaaggtcaatcttgtgtcgggaagt
aacggtactgtttcaatctctgaactcatcagtgtcgaggctttcgtagctcatgtaagt
gtggatgactctgacactggagaaaatggccgagtggagtgctccatcacctcctccgcc
gtcttctttggaatcgaaccaatgaatagaggttacaaggtggtggtcaaaaccccactg
gaccgtgaaaaagccagtcagcacaatgtaaccgtggcttgccatgactttggatcccca
gcattaacatcttctcaaagttttattgttaaagttgtggatgaaaatgataacaaacca
gtgttttctcaaccagtctactttgcaagcattgaagaaaataaccctgttggagtcacg
gtgactaaggtctcggccactgattatgatattgattccaatgctcagattctgtatgtt
ctccacagtgatgcagggtcttctttcagcattaatcgtatcactggtgtcatcaatgcc
actggggtactggacagagaggtgaccagtgactacttgttccgagttcttgcagtggat
gggggcaaagaacctaaaaccggcacagccaccgtggttgtcaacatcaccgacatcaac
gataaccgacccaaatttacagaatccctcttcacattagaagtgagcgaactaagtcct
ccatacacccagatcggctccgtcacagcctatgatccggacctgggacagaatgcttac
ttgcaatactccatgtcttcacaagacaggaatgtccccttccaggttctgcagaatggc
accgtgatcacccgagctgagctggacagagagtatcagagtcagtacaatttcatggtg
tatgcaagagacagtggcaatccctcgctgaacagctctgcctacgttacggtctatgta
accgatgccaatgataacgaaccccaaattttatttcccaacaaaatgaataacactgtg
tcctccactgtcacctcgcttcccatcaccaaagtcatagcggaggacaaagacgagggg
atcaacagacagctcacctacttcatacagtctggggacgataaaaacatgttcaacctt
cattcccagacaggggaactgttcctcaatcctaactttaagtttacgactgatcagtcc
gtgagtctgataatctgtgtaaaggataatggtcttcctgttaaaagtgcttgtacccag
ctcaacgttgaagtgtccatcaacaacgtcacaataagcaaccagaaaccagaagcggac
aataagtacatttatatttccattggtgtcatcatattcactatcgtcatctctgtcggt
atcgtggttgtcatattggtcatccggaagaaggaccatcagcgcaagaagtacaaggcg
agcccagggcccctgggggtccccatgcagaacggctacacccccgccagtgccccagcc
ctgcccaatcctggctcagaggaagagttcatggagaggaagaaggtgacctttggtcca
gggaccaccagggagggtgtcaatccaagctacagctccaacatctcacaaaacaattta
tatgacaagcccccatcatactcctccttgaagccagatgccaaaattgaggccatgaat
gcccttaaacttcaacaaattctgctgaaaaaagacaaccaggttgtcaccagtggaaga
gctcaccctagtgacagtaatagcgacacatcaggggaaacaaccacatcggacagtgga
agaggaggaagcgaggacgataatcccagcactgcacacactgcagatgactcccggtca
tttgatttctacaacaaccaatccatgtctccagtgtcattcacgtcgtcactgccaagg
aaagacagtaaaccacccaggcctcctccttgccacatgcccagcagtagtgaaaaaaga
cactcggctgtttcctataatagtgctcacatgccatattctcctcctatctcattttca
tctcataataactcagatccatgggactatgtaaagtccccctattattccagtgttcat
aaagactattttaatctcggtggcggaggcagcctcatcagcaccacaaaatcgcgagat
gacgacgatgacgccgcaactaccacatcgggcagctacacaatcaatccagaggacttg
gatgacgatctcaactacagatgttccaacgactttgtagtgtag
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