Crassostrea virginica (eastern oyster): 111122940
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Entry
111122940 CDS
T09197
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111122940
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111122940
Cilium and associated proteins [BR:
cvn03037
]
Other cilia and associated proteins
Stereociliary proteins
111122940
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
111122940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HEAT
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
111122940
NCBI-ProteinID:
XP_022320688
UniProt:
A0A8B8CY04
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All DBs
Position
1:38209799..38243110
Genome browser
AA seq
1021 aa
AA seq
DB search
MDWYLVPHLTMSRDWPTFPIRKAKWRDFMIPNDLVITPLQFKEKGERKYVARHISFLGIG
RPKVPVTRKDPFQLDNHVQLEDATYNSKSTPVLRSHSFGGRPAMKAHHDLQHTPTGAPVL
GETLRARGHWTLHKNSPTSRSTSSLSFKKSPKMPKVPRPNRTLLMFDSVKKGVRDFIQAT
RDDIEALHSRTVDQTTTSQGRLLETDKQIKAAERYLKRLEFHLAKIEELHDNYLIQQQMR
EGTRTLQRAFIVSPHRKKDSMDRVRYGLKECSQMMCSIEAQLEAMMGTFSCKLKGMAGFA
RLCPGDVFEIVIKHGHQKWKSKGRIEKNGTQRWDHPDFKFKAVIGDVFNIKGIELRLLKS
VTLGQKKCETKELFSANPQLMTVSINTNGSLKLSVIIIWNPLDGVEETTPHFDIPLRQPS
TPRRRPVSVMALNGELTQSDFLGPERRFSNPVSLTQTKDDNFILRASATPSAYPSSHHYG
HHLSSQSNAMYLPSGASPQFMNTHSPPVTSRFADPRQQIPQRYTVSQPNLNSGVASSSSS
PTPNRIPQFLSSGSSDTYGNMHFNVAMGHGITLTKDEPVHIEDALNSLSACLEDYHGQYR
DLEKLEDVVVVLEQVLRKESRCSSRSGSICVSVRDALGAFDFLDTEVTEDGGETNPESTI
FDHVMSSPESTAKTADSGIESLAKRLSEDVNLGSSEGSSPLPPSTGNEQVDQALVFHLVY
CERLLESLGSFGPLKCREIYALDRLRKQADIIEHLIKISQASDIDLHAIMTELSDDKSLR
EFWVRCTDTNVLYIHPEKLVGAFEQKYGAQLQSKYNRDPKKVLRHLVTRILDVPSYDPEK
VKATCIVTLHQFLQYFKDEGGLQNVDAVAAELQMIERLCSGKSESIIKCVMSLQQTLPPS
PCLKVMGALLVSGSNDVAKTIESYLETIAKHKELRDKALLVFVEGLEDKTPEIRAGACEA
LGKLEGSESIDRLSYLCQTDSSTVVRVRSKQALFSFGDVGRRAFEEVQLSSHGFQGLQVR
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggattggtatttggtaccccacctgacaatgtccagggactggcccacgttccccatc
aggaaagcgaaatggagggactttatgattcctaatgaccttgtcattacaccactgcag
tttaaagaaaaaggtgaaaggaaatatgttgcaaggcatattagtttccttggaattggc
cgtccaaaagttccagtgaccagaaaggacccattccagttggataatcatgttcaattg
gaggacgccacatacaacagcaagtcaacccctgtcctaagaagtcactcgtttgggggc
agaccagccatgaaggcccaccacgatctacagcatacccccaccggagcaccggttctg
ggggagaccctccgagcccgggggcactggaccctccacaagaactcccccacctccagg
tctacctccagcctgagttttaagaagtcccccaagatgcccaaagtccccagacccaat
cgaacacttttgatgtttgacagtgtgaaaaagggagtgagagattttatccaggccacc
agggatgacattgaggctctacattccagaactgtggaccaaacgaccacctcacaagga
agactgctggaaacagacaagcaaatcaaagcagcagaaagatacctaaagagattagaa
ttccatctagcaaagatagaggaactccatgacaactaccttatccaacagcaaatgaga
gaaggcaccagaacattgcagagagcctttattgtgtcccctcatcgcaaaaaagactcc
atggacagagttcgatatggactcaaagaatgttcacagatgatgtgttccattgaggca
caactggaggctatgatgggtactttttcatgtaaactgaaaggaatggcaggatttgcc
agactgtgtcctggtgatgtctttgagattgtcatcaaacacggccatcagaaatggaag
tctaaaggtcggatagagaagaatggcacccagcggtgggatcatccagatttcaagttc
aaggccgttataggggatgtttttaatatcaagggcattgagttaaggctcctgaagtca
gtgactcttggacagaagaagtgtgagactaaggagttgttttctgccaaccctcagtta
atgaccgtcagcatcaacacaaatggctccctcaaactcagtgtcatcatcatctggaac
cctctggatggggtggaggagaccacaccccactttgacatccccctgagacagcccagt
acccccagaaggaggccagtgtcagtcatggcacttaatggagaactgactcagagcgat
ttccttggaccagagagaagattttcgaatccggtcagtctgacacaaacaaaagacgat
aatttcattctgcgtgcttcggcgaccccgagtgcatacccttcatctcatcattatgga
caccatttatccagccaatcaaacgccatgtacttgccaagtggtgcttccccacaattc
atgaacactcactctccccccgtcacttcgagattcgctgacccccggcaacagatacct
caaagatatactgtgtcgcaacccaacttgaattcgggtgtagcctcctcttcctcctcg
ccaactcccaacagaattccgcaatttttgtcgagtggttctagtgatacttatggaaat
atgcactttaatgtggccatgggtcatggaattaccttaaccaaggacgaacctgtgcac
atagaggatgctctgaacagtttgagtgcttgtttagaggattaccatggacagtaccga
gacttggagaagttagaggatgtggtagtggtgttggagcaggtccttcgcaaggaatct
agatgtagttcacggtcgggcagtatatgtgtgtctgtgagagatgcccttggtgctttc
gattttctggatacagaagtgacagaagatggaggggagacaaatccggaatctacaatt
tttgaccatgtgatgtctagtcctgagtcaacagccaaaacagctgattcaggaatcgag
tccctggccaagcggttatcagaagatgtaaacctgggatccagtgagggttcaagtccc
ctacctccctccactggaaatgaacaagtggaccaggctctggtgttccatttagtctac
tgtgagaggctactggagagtctaggaagctttggtccactgaaatgcagggaaatatat
gctctagacaggctacgaaaacaggctgatatcattgaacacttgataaagatatcccag
gcctccgacattgatctccatgcaattatgacggaactgagtgatgacaagagtttacgc
gagttttgggtgagatgtactgacactaatgttctatacatccaccccgagaaacttgtc
ggtgcctttgaacaaaagtatggtgcacagctacaaagcaaatacaacagggacccaaaa
aaggtattacgacacctggtgacgaggattctggatgtccccagctatgaccctgagaag
gtcaaggccacctgcattgttacgcttcaccagtttttgcagtactttaaggatgaggga
gggttgcagaatgtagatgctgtagcagctgaattacaaatgattgagagattatgttct
ggtaaatctgagagcatcatcaaatgtgtgatgtccctccagcaaactctccccccgtcc
ccctgtctgaaggtcatgggtgctctgctggtcagtggcagcaacgatgtagccaagaca
attgagtcctacttagaaaccattgcaaaacataaagaactgcgggacaaggccttattg
gtgtttgtggagggactagaagacaagacaccggagataagggcaggtgcttgtgaagcc
ctgggaaagttagaggggtcggagagtatagacagactgtcctatctctgtcagacagat
tcctcgaccgtcgtccgcgtcaggtccaagcaggctctgttctcctttggtgatgttgga
cgacgggcttttgaggaggttcaattgtctagccatggtttccaaggacttcaagtcaga
aagtag
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