Crassostrea virginica (eastern oyster): 111123127
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Entry
111123127 CDS
T09197
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111123127
03041 Spliceosome [BR:
cvn03041
]
111123127
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111123127
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111123127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
FUBP_C
KH_KhpA-B
KH_KHD4_2nd
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
111123127
NCBI-ProteinID:
XP_022320952
UniProt:
A0A8B8CYJ2
LinkDB
All DBs
Position
3:26248676..26265100
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AA seq
698 aa
AA seq
DB search
MDAGEQGNSSHQAAFADAVARARQIAAKINQPGAGGGDGSQPLKRPFESDGNSYGEPDQK
KTVSAINDPIGAQLRALQDQQSRSDAAQAAQAAAARINQQLGVGPPSSAPPPSVPKPSSH
QGLGMVVTEEYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSS
GSIAACKQQIQDIIMRANQTGGPGMDGMGSMGGMGGGNGGGGGQTVVEIMVPGNKVGLVI
GKGGETIKQLQERGGVKMVMIQDSNIPSANEKPLRISGDPQKCQRAKEMVLDLLAEKEME
NMSKGFNDYGSYGGGGPPMEIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKADDGSSP
ERVCAIAGSPDKVQIAAQMIQDLLNDYQQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGR
GMGRGDGFGGFQDETQFAVPADKCGLVIGKGGETIRQINQQSGAHVELQKHPGPNPNEKL
FNIKGNPDQIQHAIQMISEKAGIPYGGPGGPGMGGPGGPGPHGGPVPGGPGGYGDQYGGQ
YGAPGQQQGGGQYGNGPQGGWGGYNQQQGYPQQQSGDPSQGGSDNKQAQDNAAAWAAYYA
QYYAQYGGYGGQYNQQQGQQQPQQPAQQSQAPQQQQPSSQQNYAEPCKSINPATGQADYS
AAWAEYYRQQGMHYQANMILQQAAAGQSGGAPQGQQPQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggagaacagggtaattcgtcccaccaagcagcatttgcagacgccgttgcc
cgagcaagacagattgcagctaagattaatcaaccaggggctggcggtggtgacggatcc
cagccattgaaaagaccttttgaaagtgacggaaactcttacggtgaaccagaccaaaag
aagacagtgtctgcaattaatgaccctattggggcacagctaagagctctccaagaccaa
caaagccgaagcgacgctgcacaagcagcccaagcagcagctgccagaattaatcaacaa
ttaggtgtcggccctccatcgtcagcccctcctccatcagttcctaaacccagctcacac
caaggactaggcatggttgtcacagaggaatatgctatccctgacaagatggttggcctt
ataataggtaaaggcggtgaacaaataacacggctacaagctgaaacgggttgtaaaatt
cagattgccccagatggtagtggcatgccagaccgtcagtgcaccctcacaggttcctcg
ggctctattgctgcatgcaaacagcagattcaggacatcatcatgagagccaatcagacc
ggtggaccagggatggacggcatggggagtatgggtggaatgggaggtggtaacggaggc
ggaggtggtcagacagtggtagagatcatggtcccaggcaacaaggtgggacttgtcatt
ggtaaaggaggagaaaccatcaaacagttacaggagagaggaggggtcaaaatggtgatg
atccaagatagcaacatcccttctgccaatgagaagcccctccggatctctggtgatccc
cagaaatgtcaacgtgctaaggagatggttctggatttgctggcagagaaggaaatggag
aacatgagtaaaggttttaatgactatggatcttatggtggaggtggtcctcctatggag
atcccagtgcctagaacagctgtgggaattgtcattggcaaaaatggagatatgatcaaa
aagattcaacaggagagtggagccaaagttcagtttaaggctgatgatggaagtagccca
gagagagtttgtgccattgctgggtcaccagacaaagtacagattgctgctcagatgatt
caagatttgctgaatgattaccaacagagagaaggtggcatgggtcgtggatttggggga
ggcagaggtcggggtggtcctggcagaggtcgcgggggctttggaggggggcccggtaga
ggcatgggacggggagatggctttgggggatttcaggatgaaactcaatttgctgtccca
gctgacaaatgtggattagtcattggaaagggtggtgaaaccattcgtcagattaaccaa
cagtcgggagcacatgttgaactccagaaacatccagggccaaaccctaatgaaaagtta
ttcaacatcaaaggaaatcctgatcaaattcagcatgctattcagatgatcagtgagaaa
gcaggaataccctatggaggaccaggtgggccaggtatgggtggtcctggaggaccaggt
cctcatggtggccctgtccctgggggtcccggaggatacggggatcaatatggaggacag
tatggagcccctggtcagcagcaagggggaggtcagtatggtaatggtcctcaaggtgga
tggggaggatacaatcagcagcagggatacccccagcaacaatccggggaccccagtcag
ggtggttcggacaataagcaggcccaggacaatgctgcagcatgggcagcatactatgct
cagtattatgctcagtatggtggttatggagggcaatataatcagcagcagggacaacaa
caaccccagcaaccagctcagcagtctcaagctcctcagcaacaacaaccttcatcccaa
cagaactatgctgaaccctgtaagtcgatcaacccagctaccggtcaagcagattacagt
gcagcttgggcagagtactaccgacagcagggaatgcactaccaggcaaacatgattcta
cagcaggctgcagcagggcagtctggaggagccccacagggacaacaaccccagtaa
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integrated database retrieval system
