Crassostrea virginica (eastern oyster): 111123149
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Entry
111123149 CDS
T09197
Name
(RefSeq) putative peptidyl-prolyl cis-trans isomerase dodo
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111123149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111123149
03110 Chaperones and folding catalysts [BR:
cvn03110
]
111123149
Enzymes [BR:
cvn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
111123149
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111123149
Chaperones and folding catalysts [BR:
cvn03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
111123149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
111123149
NCBI-ProteinID:
XP_022321004
UniProt:
A0A8B8D7E7
LinkDB
All DBs
Position
3:17143477..17147040
Genome browser
AA seq
153 aa
AA seq
DB search
MADDLPEGWEKRMSRSAGKEYYLNIHTKESQWDRPTAPAEKSGMVQCSHLLVKHRDSRRP
SSWREDNITRTKEEALKILRGYRDQIVSGQATFEELASQFSDCSSAKRGGDLGPFGRGQM
QKPFEDATYSMKVGELSEPVDTDSGVHIILRTA
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatttgccagaagggtgggaaaagcgaatgagtcgctctgctggcaaagaa
tactatttaaacatccacaccaaggagagccagtgggatcgcccgacagctccagcagag
aagagtggaatggtacagtgctcacatctcttggtgaagcacagagattctcgtcggcca
tcatcatggcgagaagataacatcactcgaaccaaggaagaggctttaaagattcttaga
ggttaccgggatcaaatagtcagtgggcaggccacgtttgaagagctggcatctcaattc
agtgactgtagctctgccaagagagggggggacctaggaccatttggaagggggcagatg
cagaaaccattcgaggatgcaacctactccatgaaagtgggcgaactcagtgagccagtg
gacacagattccggagtccatatcatactaaggacagcctaa
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