Crassostrea virginica (eastern oyster): 111123210
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Entry
111123210 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111123210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111123210
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
111123210
Endosome - Golgi transport
Arf GTPase associated proteins
111123210
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111123210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
SAM_2
SAM_1
RA
PH_8
SOS1_NGEF_PH
PH_9
RA_3
PH_13
RA_2
PH_2
Motif
Other DBs
NCBI-GeneID:
111123210
NCBI-ProteinID:
XP_022321097
UniProt:
A0A8B8CYY1
LinkDB
All DBs
Position
3:40775886..40843503
Genome browser
AA seq
1737 aa
AA seq
DB search
MDLGRSLEEWLNNLDLGQYLPNFQAAGITEISHLFSLDNGFLTDIGVSPDSHRHRILDHL
PTLAGDPSSDEDYVNCPSPHGLGPQTEDIYANVPETIQERPPSVPKSWEPRPSLSISGNK
KKPVPRPRASRTRIISPSGSQHSPSVTPDDNFPPSYDAVLSSGQSVILAGHTDAESSTDL
QYDQLPNSAWKNLSPKSNDEQHNFTDNFTDFEVDKVNERQISCAQNDLFLLNQNAGKPLQ
NVSVPGNFADFANNVPEENRHSETYEPIWVSQAEQSKKSQNLMSPAINSPPVSTPEAPAP
CRTHFPFEGNVDDSFGSTSTCPYDSPLRRDLVDDDAVYYNTDSHKDSEPDLQVPTRKVTS
SCASSKVNDNIEPPKDHNDSSESEGLNSSFDLPPPTFAPPPLPNGSTHSVPLGLSEFDPL
NTPILPPLPPRVTSDSCVSSHGYINIDSEAEKSDASFSARERGIYSLAYSPNPQVTSTPK
GKSQVNASNSDPTLSRSSPRSPPDRHQFTSQPSNMSLSSDPFSGDDPFDDFHMECKEFNR
QFPHPDSSANSTEREKLYSRACNSGGSSSSFGQSTGVPQCHLSSSSEPLYSMVSPISNDL
DSEDSSDNKSIDSENGSLIGNMVDIVPAGQLTPQRKYEKAGFLLKQGGVKGNKGWRKRWV
LFTGNSLRYYDSRKSQVSKRIVPLSCMQKVEVLVKDSDKDKFKFNLHTTNRVFQFAAESL
QECTLWSNTIMECILKYRAPPGGEPEGLDMNEPDKQGFIKFERRNNYYVAVKQGKMCYYQ
SEEDFKQGSPINEIDMKLANVKEIGKGKLQLSTHYAHFLLIPESYSECVLWKMAFEESIA
DALGDNTILDQVMENPSNRMCADCLAEDPHWASINIGIVLCKKCADLHNGLISPVGIHRN
FEHSISRVKSLRMDTRIWTPSLIEMMKAIGNRNANDFWEYHLSPDKRINSDTSSATRMAH
IEDKYKAKLYCDKSIISDNPRVLNEKLLEFSEKGDLLLTMKAFFSGANMCYKNSENENAY
KIAKKMGQRLTMEFLFQNGGDRSSDSLSDSDEAQASRLRAEVCLDGYLQKTGSNKKDFRK
RWCVIEHGCLRYFLSQTSSGAKDSVDNDIMMCVQAVSTNDKSLTTVRNVNKRYPEAFELS
TCKNNREYLFAASSPEERKSWMVALSKLFCPIALMGDIGHFEFNLAGNFYVRDVSTAWDK
TWLMINNRMLEYFDQNKQEFCKIDLRKAVNIRYSESTFACTTCLEVGKCLALDVHGKSLY
IQADLARDTERLLNVCSVAVKMGGNTLEDQQLSPTNVPVIIEKCVCFIEDYGIQEEGIYR
LSGVKSKVQALLDKFMSDAQSVVLQQGVNQVHEVAACLKLFLRSLKDPLLMSSKYASWIQ
NADAIMHGRMDTQVKIEWYQFLIRELPPXNYNTLKRLIHHFNRLAQYSAQNKMTEKNIAI
AFGPTLMQTEAESELNSTHVQLQMIVIGDIMKHHQKLFKLGEDEKLKQEKVEEGKKILEV
ITTNQGNVHINESLKISVYFLSRNGNSYNPEINIHTTVKQVIDQLKNKFNATNEDYTLHE
VLCDGALERPLHSSDTPHSVVRAWWDWPEVYRKQACLCLKPTCDLMLKLSNMYDPSRALF
SEIRLIEKKPMGGLISKSSKYAFQFQQSRLSYYKDIRSAGGSPVGSWNIEDLVIYYGMDP
VIKKGDKYGVTFLRVGETPGSKETPIFGHTLCFTSENDSLHWMAAMLVAQHPEGLLV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggacgaagcttggaggaatggctgaacaacctggatctgggacaatacctg
ccaaacttccaggcagcaggaatcacagaaatatcccacctgttttctctagataatgga
tttttgacagatattggagtttctcctgacagccatagacaccggatactcgatcacctc
cccactcttgcaggagacccaagttctgatgaggattacgtgaactgcccctcgccccat
ggcttaggcccacagactgaggacatttatgctaatgttcccgagactatccaagagaga
cctccgtctgtgccgaaaagctgggagccaaggcccagtctgtccatttcaggaaataag
aaaaaacctgtgccaagaccaagagcctcgcgaaccagaataatcagtccttcgggtagc
cagcatagccccagtgtcaccccggacgacaactttcctccaagttatgatgctgttttg
agttcaggacagtctgttatcttggcaggccatactgatgcagaatcatccactgattta
cagtatgaccaactgcctaacagtgcttggaagaacctttctcccaagtctaatgatgag
cagcacaactttactgacaattttacagactttgaagtggacaaggttaatgaaagacaa
atatcttgtgcccagaatgatttgtttctgttaaatcagaatgctggcaaacctctgcag
aatgtgtccgttcctggaaactttgcagattttgcaaataatgttcctgaagagaacaga
cactcggagacttacgaaccaatatgggtatcgcaagctgaacagagcaaaaaaagtcaa
aatctgatgtcgccagctattaattcaccccctgtttctaccccagaagcacctgctccc
tgcagaacacattttccttttgaaggaaatgttgatgacagctttggtagtacgagcact
tgcccatatgacagtcctttgagaagggatcttgttgatgatgacgccgtgtattataat
acagattcccacaaagacagtgagccagatttacaagtgcctactagaaaggtcacctct
tcctgtgcttccagtaaagtgaatgacaatattgaaccaccaaaagaccacaatgattca
tcggagagtgaaggattaaattcttcctttgaccttcctcccccaacatttgcccctcct
cccctgccgaatggttccacccacagtgtccctcttggcctgtcagagtttgatcctctc
aatacacccatcttacctcctctacccccacgggtaacttctgattcctgtgtcagttca
cacggatacatcaatattgactcggaggctgagaaatcggatgccagcttttcagcaagg
gagaggggcatttactctctagcctactctcctaacccccaagttaccagcacccccaag
ggcaaaagccaggtcaatgcctccaattcagatcccactctgtctcgctcctctcctcgc
agtcccccagacagacaccagtttacatcccagccctctaatatgtctctatcatcagat
ccattcagcggcgatgatccgtttgatgactttcacatggaatgtaaagagtttaataga
cagtttccgcatcctgacagtagtgcaaactccacagaaagagaaaagctgtattccaga
gcctgtaattctggaggttctagttcttcttttggacaatcgactggtgttccccaatgt
cacctaagcagctcctctgaacctctttattccatggtatcaccaatttcaaatgactta
gattcagaggacagttccgataacaagtccattgattctgaaaatgggtcattaattggg
aacatggtggatatagttcctgctggccagcttactccacagagaaaatatgaaaaagca
ggttttcttctgaaacaaggaggagtgaagggtaacaaaggatggaggaagcgatgggtt
ctattcactggcaacagtctacgttactatgacagccgcaagtcccaagtgtcaaaaaga
attgtcccgctgtcttgcatgcagaaagttgaagtgctggtgaaggacagcgacaaggac
aagtttaagttcaacctccataccaccaaccgagtgttccaattcgcagccgagtcctta
caagagtgtacattatggagcaatactataatggaatgcatccttaagtacagggcgcca
cctggtggggaacccgaggggttggacatgaatgagccagacaaacagggttttataaaa
tttgagaggcggaataattattatgtagctgttaaacaagggaaaatgtgctactaccaa
tccgaagaggatttcaaacaaggatctccaatcaatgaaatagacatgaagttagcaaat
gtgaaggaaataggcaaaggaaaattacagctgtctacacattatgcccatttcttattg
attcctgagagctacagtgagtgtgttctgtggaaaatggcgtttgaagagtccatagct
gatgccctgggggataatacgatccttgatcaagtgatggaaaatcccagcaacaggatg
tgtgcagactgcctagcagaagatccccattgggcctccataaatattggaattgtgttg
tgcaaaaaatgtgccgatcttcacaatggattgatatccccagttggtatacatcggaat
tttgaacactctatatcaagagtgaagtcactccgaatggataccagaatatggacccca
agtctaatagagatgatgaaagccatagggaacagaaacgccaatgatttttgggaatat
catttatctccggataaacgcatcaactcggacacatcatctgctactaggatggcccat
atagaagacaaatacaaagccaagctttactgtgataaatcaatcatatcagacaaccca
agggtactcaatgagaagctgttagaattcagtgaaaagggagatctgcttcttacaatg
aaagctttcttctctggtgccaatatgtgttataaaaacagtgaaaatgaaaatgcatat
aaaatagccaaaaaaatgggacaaagattaacaatggaatttctttttcaaaatggaggg
gatcgctcctctgattctctcagtgattcagatgaggcccaggcatccagactcagggcg
gaggtctgcttagacggttaccttcaaaagactggaagtaataaaaaagatttccgcaag
cgatggtgtgtaattgaacatggatgtctacgatattttcttagtcaaactagttcagga
gccaaggatagtgtagacaatgatatcatgatgtgtgttcaggcagtttccactaacgac
aagtccttgactactgtgagaaatgtgaataaaaggtatcccgaggcatttgaactgagt
acctgtaagaacaatagggagtatttgtttgctgcctcttcacccgaggaaaggaaaagt
tggatggtggctctatcaaaattattttgtccaattgcattaatgggagacattgggcac
tttgagttcaaccttgcaggaaatttctatgtcagggatgtgtcaactgcatgggataag
acctggctgatgatcaacaacagaatgcttgaatattttgatcaaaataaacaagaattt
tgcaaaatagacctcaggaaagctgtgaatataagatacagtgaatctacatttgcctgt
acaacatgtttggaagtgggcaaatgtctggcactagatgtccatggaaaatcactctac
attcaagccgacctagctcgggatacagaaaggctgttaaatgtctgcagtgtagcagta
aagatgggaggcaatacactagaagaccagcaactctccccaacaaacgtccctgtgatc
attgagaaatgtgtctgctttatagaggattatggtattcaagaggagggtatataccga
ttgtcaggggtcaaatccaaggtacaggccctcttggacaaattcatgtctgatgcccag
tctgtggtgctacagcagggagtgaaccaggtccacgaagtggcggcctgcctaaagctc
ttcctccgcagcctcaaggaccccctcttaatgagctccaagtacgcatcgtggatccaa
aatgctgatgctattatgcatggtcgcatggacactcaggtgaagatcgagtggtatcag
ttcctgatccgagaactgcccccantcaactacaacacactcaagaggctgattcaccat
ttcaatagacttgcacaatactcagcacagaataaaatgacagagaaaaacatagctatt
gcttttggtccaaccttgatgcagactgaagcagagtcagaattaaacagtacccatgtg
cagctacagatgattgtcataggagacatcatgaaacatcaccagaagttgttcaagtta
ggcgaagatgaaaagttgaaacaagagaaggtggaagaagggaagaagattctggaggtg
atcacaacgaaccaggggaatgtacacattaatgaatcactgaagattagcgtgtacttc
ctgagtcgcaatggaaacagctacaatcctgagataaacattcacaccacagtcaaacag
gtgattgatcaactgaagaacaaattcaatgccacgaatgaagattacactctgcatgaa
gtgttgtgtgatggagccttagagcgccccctgcacagttcggacacaccccattccgtg
gtgagggcgtggtgggattggccggaggtgtaccgaaagcaggcctgtctctgtctgaag
cccacgtgtgatctcatgctgaaactctcaaatatgtatgatccaagtcgagccttgttc
tctgagatacgcctgattgagaagaagccaatggggggattaatcagtaaatccagcaag
tacgccttccagttccagcaatcccgcctctcctactacaaagacattaggtcagcaggt
ggttccccagtgggatcctggaacatcgaggatttagtcatttattatggaatggaccca
gtcatcaaaaagggagacaagtatggagttacttttctgagagtaggagaaacaccagga
tccaaggaaacaccaatatttggacatacactgtgttttacctcggagaacgattccttg
cattggatggccgctatgcttgttgctcagcatcctgagggtctcctagtatga
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integrated database retrieval system
