Crassostrea virginica (eastern oyster): 111123242
Help
Entry
111123242 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin-like
KO
K05700
vinculin
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04517
IgSF CAM signaling
cvn04518
Integrin signaling
cvn04519
Cadherin signaling
cvn04820
Cytoskeleton in muscle cells
cvn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111123242
04518 Integrin signaling
111123242
04519 Cadherin signaling
111123242
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111123242
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111123242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111123242
04147 Exosome [BR:
cvn04147
]
111123242
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111123242
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111123242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
ARM_TBCD
MJ1579
DUF3140
Motif
Other DBs
NCBI-GeneID:
111123242
NCBI-ProteinID:
XP_022321154
UniProt:
A0A8B8D0W8
LinkDB
All DBs
Position
1
Genome browser
AA seq
1099 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQVSRLVILHEEAEDGNAMPDLARPVQTVKLAVDNLVKVGYDT
INSSEDQILKQDMPPALNRVEEASLLLLQASEMLRXDPYSAPARKKLIEGSRGILQGTSS
LLLAFDESEXRKIIRVCKNVLEYXAITEVVERMEDLVTYVRNLTPVLTRMTKEVDAREKE
LTHQVHREMLTRSLEQVKNLTPVLISGIKTFITVKDSGKDPQDTQANRDYLVRKMADEIH
EIIRVLQLTTYDEEEWDADDITVMKKAQSGIEQKMKQATDWLQDPAALIGSLGDKALHQV
LDDARKIAERCTNPADRDQILKTVGDIESMVDSLSELRQLGKGDSPQAMSLAREIQKKLG
DLQNMTNVAIANTERSGIRRPAXTVDGKVEQARTWLANPGLDDKGLGEQATRLVVSEGRK
IANSCPEPQRTELLRLCDETEILTNQLADLIRKGQGNSPQARAIANHLSEKLFQLKNKIK
EALINQVAEDFIDISTPLKHLSEASIVPMGTPGRDQNFAEKSRNFEGHAGKLADTAKMVA
TAGGCRNKKTVEEIFKTSAQVDDLTPQVTTAAKIVFQDPTNQAAQEHFDLMKKRWMDNME
RLRGLVDEAVDSSALIKAEEEGILRDTERVEDAIQMKDPPRIGAHASNIARRANRVLQVA
QQEAENSEDPKYVDHVNEAASNLRSNLGFIESIAPMVQGAKGVSLNPGDSNAQQNWRKAN
QNLIDAVRDVRGAVTVDAGIDQFPPPPPPDLSELKISDLYGPPRWEPVTPSLVRSQATPV
PVSPRPPRPPAFSPHSDPHYRNVNTRVPDQFADGPVMYQPQATLHQDPLYQGQSCAPMVP
PPPVPPPPQEFGFYGRDGGAPPRPPLPNDNATPPRPPPPETDDEDEAAFPTPQANQPIMM
AAHXLHMEAKQWSSKDNDIIAAAKKMALLMAKLSQLVRIPFDFKSFRKALNMPDTPEPRG
EGGSKKDLIATAKNIAEQSEEVTRLAKKLAAECTDKQMRKNLLQVCERIPTIGTQLKILS
TVKATMLGAQEPIPSPDGSEIECGSKEDQEATEMLVGNAQNLMQAVKETVRAAEAASIKI
RVDSGYTIRWLRRRPWYTS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtttcatacaaaaaccatagaaagcatcctggagccagtggctcagcaggtg
tctcggctggtgatcctccacgaagaagctgaagatgggaacgccatgccagacctggcc
cgacccgtacagacggtcaaactggcggtggacaacttggtcaaggtggggtatgataca
atcaatagtagtgaggaccaaatcctgaagcaggacatgccccccgccctgaaccgagtg
gaggaggcctctttactgctcctccaggcctcagagatgttgaggnacgacccctactcc
gcccccgccaggaagaaacttattgagggctcccgcggcattctgcaaggaacctcctct
ctccttctggcctttgatgagtccgagngtaggaagatcatccgtgtgtgcaagaatgtg
ctggagtacntggccattacagaggtggtggagaggatggaagatctggtcacttacgtc
aggaacctaactcctgtcctaactcgcatgacgaaggaggtggatgctagagaaaaggaa
ctaacccaccaagttcacagggaaatgttgacccgctccctggaacaggtgaaaaatctc
accccagttctcatcagtggcatcaagaccttcatcaccgtcaaggactcgggtaaagac
ccccaggacacacaggccaacagagattacctggtcaggaagatggcggacgaaatccac
gagattattcgcgtccttcaactgaccacatatgacgaggaggagtgggatgctgatgac
atcactgtcatgaagaaagctcagagtggtattgagcaaaagatgaaacaagccactgat
tggttacaagatccagctgctctaattggtagtttaggagataaagcccttcatcaggtt
ttggatgatgcaaggaagattgcagaaaggtgcaccaacccagcagaccgtgaccaaatc
ctcaaaactgtgggtgacattgagtccatggtggattctctcagtgagctaaggcagctg
ggaaaaggagattctccacaagccatgtcactggctcgagaaattcagaagaagctcggc
gaccttcagaacatgaccaatgtcgccatcgctaacacagaacgtagcggaatccgtaga
cctgcanccacagtagacgggaaggtggaacaggccagaacatggctggccaatcccgga
cttgatgacaaaggcctaggtgaacaggccactcggcttgtggtgtctgagggcaggaaa
attgccaattcttgtccagagccccaaagaacggagctcttacgattgtgtgacgagaca
gagatactgaccaatcagctagcagacctgattaggaaaggacaggggaattcgccacag
gccagagctattgccaatcatttatcagagaaattgttccagctgaaaaataagatcaaa
gaggctctcattaaccaggtggctgaggatttcattgacatctctactcctctgaaacac
ctgagtgaggcctctattgttcctatgggtactcctggcagagatcagaattttgcagaa
aagtcgcgtaactttgaaggtcatgctggaaaactggcagatactgccaagatggtggcc
acagcaggaggatgtcgcaacaagaaaaccgtggaagaaatcttcaaaacctcagctcag
gtggatgacctgaccccacaggtcacaactgcagccaagatcgtgttccaggatccgacc
aatcaggcggctcaggagcactttgacctgatgaagaagcgctggatggacaacatggag
cggctgagggggctggtggacgaagctgtggactccagcgccctcatcaaggctgaagag
gaaggaattttacgtgacacagagagagttgaggatgccatccaaatgaaggacccgccg
cgaatcggagcacatgcctccaacatagcccgccgcgctaaccgtgttctccaggtagca
cagcaggaagcagaaaacagcgaggaccccaaatatgtagaccatgtgaatgaagcagct
tctaatctgagatctaatttaggtttcattgagtccattgccccaatggtacaaggagcc
aaaggggtgtcactcaaccccggcgactcgaacgctcagcagaactggaggaaggccaat
cagaatctgattgatgctgtacgtgatgtgcggggagcagtgacagtggatgcaggaatt
gatcagttcccccctccccctccccccgacctgtctgagctgaaaatctcagacttgtac
ggccccccgcgctgggagcctgtgacccccagtctggtccgttctcaagccactccggtc
ccagtcagcccgagaccccccaggcctccagccttctccccccacagtgacccccactat
agaaatgtgaacactagagtgccagaccagtttgcagatggaccagtcatgtaccagccc
caagcaaccctgcatcaggaccccctctatcagggacagtcctgtgctccaatggtgccc
ccaccccctgtacccccgccccctcaggagttcgggttttatggcagagatgggggagca
ccacctcgacccccactacccaatgacaatgcaacacccccaagacccccacccccagag
actgatgatgaggatgaagcagcttttcctactccacaggccaatcagccaatcatgatg
gctgcccatngccttcacatggaagccaagcagtggtcaagcaaagacaacgacatcatt
gcggcagccaagaagatggccttactgatggccaaactcagccagcttgttaggattcca
tttgatttcaagagttttcggaaggcactgaatatgccagatactcccgagcctcgagga
gagggaggatcaaagaaggacctgatagcgacggccaaaaacattgctgagcagtcagag
gaagtcacccgactcgccaagaaactcgctgctgagtgtactgacaaacagatgaggaag
aatctcttgcaagtgtgtgaacgaatcccaacaatagggactcagctcaagattttgtcc
acagtgaaggccaccatgttgggagctcaggaacccattccaagccctgatggcagcgag
atagagtgtggttccaaggaagatcaggaagccacggagatgttggttgggaacgcccag
aatctgatgcaggcagtcaaggaaacggtgcgagctgcggaagccgcctccatcaaaatc
cgtgtggattccggctacaccatccgctggctgcggcgcaggccctggtatacctcatga
DBGET
integrated database retrieval system
