Crassostrea virginica (eastern oyster): 111123262
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Entry
111123262 CDS
T09197
Name
(RefSeq) autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04136
Autophagy - other
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111123262
04136 Autophagy - other
111123262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111123262
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111123262
Membrane trafficking [BR:
cvn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111123262
Atg1 complex
111123262
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111123262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111123262
NCBI-ProteinID:
XP_022321200
UniProt:
A0A8B8D078
LinkDB
All DBs
Position
3:complement(27076502..27085124)
Genome browser
AA seq
476 aa
AA seq
DB search
MSKMSQQDKKDLEKFTKFLIYKSLQIIVQSRLGEKIQTKSKPFSSGADWFNLAIKDIAEV
HSETKKALAGQNALLSQNVCVEISLKTSEGAAMVLETWYIGLNKETCDVNARISYTVYNR
MGIALKTLFSISRVTPAYKLSRQQGACADDYVICYRFYQGDPQFFMLGDNYQTVKVGSVP
TPVGTIYMNLAYRTKLLITPQKSSKEIPIEVKDDHFKKDNSPRRPTTPKPCSLGFRRNST
SEDLFGDGVDGQDLCSTTFNNSPGEAFIYGMSQNVQVPPNPQQRAPQKHTSDDQEGKETT
SKKQENVEKQLSFTSYQKVGAFAQNRNSKEINKTDFEDVPFLNLLQPEGKSETMVKEQND
PNCSESNVQISGQKSEEDKVLEQPLSPSESISSNTSAPDDFVMVELKTPFAGADPNQDLG
KFYRECQGAPQLAMCTAETNITEALADISSQIQMFESNIEGFDDFVTSITESVTVE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatgagtcaacaagacaagaaagacttagaaaaatttacgaaatttttgatt
tacaaaagtctgcaaattatagtgcagtccaggttgggggagaagattcagacaaagtcg
aagccgttttcatctggcgcagattggttcaaccttgccattaaagatatagctgaagtc
cattcagaaacaaagaaagcactagccgggcagaatgcattattaagtcaaaatgtgtgt
gtggaaatttccctcaaaacgtcagagggagctgccatggttttggaaacctggtacata
ggtttgaacaaagaaacatgtgatgtaaatgccaggatctcctacacagtctacaatagg
atgggtattgctttgaagacactgttcagtatatctcgagtcactccagcgtataaactt
tcaagacagcaaggagcttgtgcagatgactatgtgatatgttatcgattctaccaagga
gatccccaatttttcatgttaggtgacaactatcagacagtaaaagtgggttctgtacca
acccctgttgggaccatttacatgaatctggcatacaggaccaagttattgataacaccc
cagaaatccagtaaagaaattcctattgaagtgaaagatgaccatttcaagaaagacaat
agcccaagaagaccaactactcctaaaccatgctcactgggctttagaaggaacagcacc
tcggaggatttgtttggggatggtgtggatggacaggacctttgttcgaccaccttcaat
aacagtccgggggaagccttcatctatggcatgtcacaaaatgtacaagtgccccccaac
cctcagcaaagagcgcctcagaagcacacatcagatgaccaagagggcaaggagacaaca
tccaaaaaacaggaaaatgtcgaaaaacagctcagttttacatcataccagaaagttgga
gcatttgctcagaacagaaattccaaggagatcaacaaaaccgattttgaagatgtacca
ttcctgaacttgttgcagccagagggcaaatcagaaaccatggtcaaagagcaaaacgat
ccaaattgttcagaatcaaatgtgcagatctctgggcaaaaatcagaagaggataaagtt
ttggagcaacctctctctccttcagagagtatttccagcaacacttcagctccagatgac
tttgtcatggtggaacttaaaaccccttttgctggggcagaccctaaccaagacttgggg
aagttttaccgggaatgccagggcgctccacagctggccatgtgtacagctgagaccaac
atcacagaggcactggccgatatatctagtcagatacaaatgttcgagtccaacattgag
ggatttgacgatttcgtcacctccatcactgagagtgtgactgtggagtag
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integrated database retrieval system
