KEGG   Crassostrea virginica (eastern oyster): 111123301
Entry
111123301         CDS       T09197                                 
Name
(RefSeq) la-related protein 1B-like isoform X1
  KO
K18757  la-related protein 1
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111123301
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111123301
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 111123301
NCBI-ProteinID: XP_022321260
UniProt: A0A8B8D0D9
LinkDB
Position
3:complement(2525255..2546459)
AA seq 1281 aa
MRNMAAVSVSSASSSNESFHSDKNTVTRQSSNPEVERPNPWKKKEVIVPEPAEKVKDPAP
TVPPPKEDGDNKSEKGDKDKESKEPKVKKFDNKTYVEAPLPKTNPWNKGKGPAGPSSPKP
VAKPPVVKPEPVEVVKQIPVIKPDAEVVPEKPVEKPTAPLSDENWPALTEVTEVLVPKKT
PTMKSSASQQTNGAPPTQQQQQQQQQQQASSDSGGDDSSKENKEVNSGGEDSHQHPKRKG
RITSKQKWVPLDIETKRRSRSHGRVNPSRRGGKEDKGADSKNWRDDMRPPSPREGRGFRG
YGFRGRGRGRGRGRGGRGRGIDQTVENLTGQDFKYSYEGEQFYADPASVSPTGVSSSGFG
TVYFSNPYTTDETTLKEFVRKQIEYYFSDENLQRDFFLRRRMDAEGWIPISLIASFHRVQ
ALTQDVNLIIQALKESESLEMSAENLKVRGKEDPAKWPLQGSVGLTVFSNLHADVPEFVP
GKAYTFHPDDSGISHDAEDFHDESSHRSGAGFSLDELTDYDPLGHTVLSSSAPELHGEWM
EVKRKVRIAKKKEEKEVEADPSTKGEEKEELDFMFDEEMDGLEVGRRNHFSEWSDEDSDY
EITDQDVNKILIVTQTPPAVKKHPQGDRTGDHVSRAKMTANMTKVINDGLFYYEQDLHES
LEMDFGQFRTVNVISQEEFQSITPSVSTPSQQVPPPPPISLQSAAKKVPSPPLSDANGTI
LAQSLPANVPTTPGRRDAGPRTPRSKGDDLTPRFYPVMKDSSHPPDPQTPRKKKTRHSSN
PPIESHVGWVMDAREHRPSRSRNNSMSQSPTESQMGSAFGSYGSTPHTFPNFHHPSHELL
QDNGFVWHVYHKYHSKCLKDRKKLGAGLSPEMNTMFRFWSFFLRQHFNKKMYSEFHQYAV
EDAAAGYRYGLECLFRFYSYGLEKRFRPDLYKDFQEETIRDYENGQLYGLEKFWAFLKYS
RRQVDVDPKLRQWLSKYKRLEDFRIEMFADQEGGRQRHTSTSSNRERHLSGSQRERHPSG
SKSAKANVTSKQQQQKAKETRRERTVSDSQSVQRSKYGGPGRRVDHRPHTPQQDRSKPRP
DSTQSTNQGKAPQGKPEKVDSVKKDDKTDVSKPAPSKDKSDQSKPTAKTDQSKSDSQKDQ
AKADSKKDHPKSSVNVKQENRPRSGHGRTDKAAKSSSSPSPKPAPNQNSKPAPNQNSKPV
SNQNSKPASSSQKPQASSKTTKSTEAQPTSPAKTSKPTESKSSSQPKSPRSTGPSPAQTQ
AKDGAGKTTEKTAVAVDKQTS
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgagaaatatggctgccgttagtgttagtagtgcatccagttcaaatgagagtttccac
tctgataaaaacactgtcactcgtcagagcagtaacccagaggtggagagaccaaacccg
tggaagaaaaaagaggtcatcgtcccggagcctgccgagaaggtgaaggatcctgccccc
acagtccccccacccaaggaggatggagacaacaagtctgagaagggggacaaagataaa
gaaagcaaggagcccaaagtgaaaaagtttgacaataagacttatgtggaagccccactg
cccaaaaccaatccttggaataaagggaaaggccctgctggaccttcatcgccgaaacct
gtcgctaaacccccggtcgttaagccagaacctgttgaagttgtgaagcagataccagtc
ataaagccagatgctgaagtagttccagaaaaaccagtcgagaagcccacggcaccccta
agtgatgaaaactggccagctttgacggaagtaacagaggtgttggttccaaagaagacg
cctaccatgaaatcgtcagccagtcagcagacaaatggagccccgcccacgcaacaacaa
cagcagcaacaacaacagcaacaagcctcatctgattcagggggagatgactcctccaaa
gagaataaggaggtgaactcaggtggcgaggactcccatcagcacccaaagaggaaaggt
cgaatcacctccaagcagaagtgggtgccattagacatagaaaccaaaagaagaagtaga
agtcatggtcgagtgaatccgtcacggcggggaggaaaggaggacaagggtgcagacagc
aaaaactggcgggatgacatgagaccccccagcccacgggaggggagaggcttccgtgga
tacggatttcgaggtcggggccggggtcgcgggaggggtagaggtggcagggggagaggg
attgaccagactgtggagaacttgacaggacaagactttaagtactcgtatgaaggggag
cagttttacgcggaccctgcgtctgtgagccccactggtgtttcctcctccggattcgga
accgtttacttcagcaacccctacaccaccgacgaaaccacgctcaaagaattcgtcagg
aaacaaattgagtactacttcagtgatgagaacctacagcgggactttttcctgcggcgg
agaatggacgccgagggctggattcccattagtctcatcgccagctttcatcgcgtccag
gccctgacacaggacgtcaacctcatcatacaggcattgaaggagagtgagagtttggag
atgtctgcggaaaacctgaaggtgaggggaaaggaggacccggccaagtggcccctccag
ggctcggtggggctgaccgtcttctccaacctccacgcagacgtcccagagtttgtcccc
ggcaaggcatatacattccaccctgatgacagcggaatctcccacgatgctgaagatttc
cacgatgagtctagccataggagtggagcaggcttttccctggacgagctgacggactac
gaccccctgggacacaccgtcctgtcctccagtgcccctgaactccacggggagtggatg
gaggtcaagcggaaggtccgcatcgccaaaaagaaagaggaaaaagaagttgaggctgat
ccctccaccaagggagaggagaaagaggagttggatttcatgtttgacgaggagatggat
ggactggaagtgggacgacgtaatcacttctccgagtggtctgatgaagactcagactat
gaaatcaccgaccaagacgtcaacaagattctcatcgtcacccagacgcccccagccgtc
aagaagcacccccagggggatcggaccggcgaccacgtcagtcgggccaaaatgaccgcc
aacatgaccaaggtcatcaatgacggcctcttctactatgaacaggacctccacgaaagc
ttagagatggattttggtcagttccgaacagtcaacgtaatatctcaggaagaatttcaa
agtattactcccagtgtctccacccccagtcagcaggtgcccccgccccctccaatctcc
ctacagtcagctgccaaaaaagttccaagcccccctctgagtgatgctaatggtaccatc
ttagcccagtcactgccggccaatgttcccaccaccccagggagacgggacgctggcccc
cgcaccccaaggagtaagggagacgaccttacccccagattctaccccgtcatgaaggac
tctagtcatcccccagaccctcagacacctaggaagaagaagacccgacacagcagtaac
ccgcccatcgagagtcacgtgggctgggtgatggatgcccgggaacatcgtccctccaga
tctcgcaacaactccatgtctcagagtcctacagagagccaaatgggaagtgcctttggc
agttatggtagcactccacatacatttccaaatttccaccatccttctcatgaacttctt
caggataacggattcgtatggcatgtgtaccacaaatatcattccaagtgtctaaaagat
cgtaagaagctgggtgctggactttcgccggagatgaacaccatgttccgtttctggtcc
ttttttctacgacagcatttcaacaagaagatgtacagtgagtttcatcagtatgctgtg
gaagatgctgcggcaggttacagatatgggctggagtgtctgtttcggttctacagctac
gggttggagaagagatttcggccggacctgtacaaagatttccaagaagagaccatacgt
gactatgaaaacgggcagttgtacggactggagaagttctgggcattcctgaagtattcc
cgcagacaggtggatgtagaccccaagctacgacagtggttgtccaagtacaaacgctta
gaggacttcagaatagagatgtttgcggatcaggagggcggacgacagagacacaccagt
acctccagcaatcgtgagcgccacctatcaggttcccagcgcgagcgccacccctccggc
tccaaaagtgccaaagccaatgtaacgagtaaacagcaacagcaaaaagccaaggagact
cgacgggagaggacggtgtccgattcccagtctgtgcagcggtcaaagtacgggggtccc
gggcgccgagtggaccacagacctcacaccccccaacaagaccgcagcaaaccgcgccct
gactcgactcagtctaccaaccagggcaaagcaccgcaggggaagccggagaaagtagat
tctgtgaaaaaagacgataaaacagatgtttcgaaaccagcaccaagcaaagataaaagt
gatcagtccaaacccacagctaaaactgaccagtctaaatctgatagtcagaaagaccag
gctaaagccgactccaaaaaggatcatcccaagtcgtccgtgaacgtgaaacaggaaaac
cgaccaagatcaggtcatggaagaaccgacaaagctgccaaatcatcgtcatcgccgagt
cccaaaccggctcctaaccagaactcaaaaccggctcctaaccagaactcaaaaccggtt
tctaaccagaactcaaaaccagcatcatcgtcacagaaaccccaggccagcagtaagacc
acgaagtcgaccgaagctcaaccgacctctccagccaaaacttcgaagccgacagaatcc
aagtcctcatctcaaccgaagtctccgcgatccactggccccagtcctgctcaaacccaa
gcaaaagatggggcagggaaaaccacggagaaaaccgctgtggctgttgataagcagacc
tcttga

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