Crassostrea virginica (eastern oyster): 111123366
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Entry
111123366 CDS
T09197
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111123366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111123366
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111123366
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
PcRGLX_1st
RBB1NT
Motif
Other DBs
NCBI-GeneID:
111123366
NCBI-ProteinID:
XP_022321362
UniProt:
A0A8B8CZP6
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Position
3:40594276..40601371
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AA seq
417 aa
AA seq
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MNGKSMDVKILPFSLILLLSLLGRGEGAFSYSLENDLRTLLFTTNSYNKLTRPLAQVAIS
AKLNLLTLTSLSIKDQTMSIAGYFTLMWSDGRLNWTADATYNTDIPAFYTNQDYVWTPSL
SVTNSVSDIAVISDNTVVIRVFKDGTLNWTPGGVYNTQCTTDVTYYPFDTQKCSVTLATW
GYTSIEISLVGGGVETTYYEQNGEWEFSTYSIQSSTRSFESNSLPQVSFDLTFKRRPMFQ
VMNTIIPMILLASLSVFVFQLPPDSGEKMGYSLTTLLAFAVYLTLVSANIPTTSINTPCL
SVYLIIMLSMGVTSVLLTIYILKCHHSPEDKPVPNYLRKFCVIAKKDCCCKRKNVVEEAD
GKVSEDTKPRVPVSETELTWPEVTEILDNFFFKLYAVVLTLLTFAVLVTLVISYLTH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggaaatcgatggacgttaagatccttccattttcacttattttgcttctatca
ttgttgggccgtggggagggggcgttttcctacagcctggagaatgacctgcgaactctg
ctcttcacgaccaacagctacaacaagttaacgagacctctagcgcaagtcgccatttcc
gccaaactcaacttgttgaccctcacatctctgagcattaaagatcaaacgatgtcaatt
gcaggatatttcactttgatgtggagcgatggtcgcctgaattggaccgccgatgccaca
tacaacacagatattccggcattttacaccaatcaggactatgtatggacgccctctctt
tcagtcaccaattcagtcagtgatattgctgtgataagcgataacactgttgtcattcgg
gtattcaaagatggcaccctcaactggacgccaggtggcgtgtacaacactcagtgtacc
actgacgtcacctactacccgtttgacacacagaaatgcagcgtgacgctagccacgtgg
gggtacaccagtatagaaatcagtctggtgggtgggggcgtggagaccacgtactacgaa
cagaacggggagtgggagttctccacttactccattcagtcatccacccgctcatttgaa
tcgaacagcctgccacaggtaagctttgacctgacgtttaagcggcgcccgatgttccaa
gtgatgaataccatcattcccatgatcctcctggcctccctcagtgtcttcgtgttccaa
ctcccgccggactcgggggagaagatgggctactccctgactaccctcctggcctttgca
gtgtacttgaccctggtgtctgccaatatccccacgacatccatcaacacaccgtgtctc
tcggtgtatttaataataatgctctccatgggggtaacctcggttctgctgaccatttat
atcctgaagtgccatcatagtcctgaagacaagccagttccgaattatctcagaaaattt
tgtgttattgcgaaaaaagactgttgttgcaaacgaaagaatgtcgtagaagaagctgac
ggtaaagtgagcgaggatacaaagccacgtgttccggtcagtgaaacggaactgacgtgg
ccggaagtgacggagattttggataatttcttttttaaattatatgcagtagttttaacc
ttgttgacatttgctgttcttgttacgttagtgatcagttatctcactcattag
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