Crassostrea virginica (eastern oyster): 111123676
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Entry
111123676 CDS
T09197
Name
(RefSeq) extracellular matrix protein 3-like
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
111123676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Frem_N
Cadherin_4
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
111123676
NCBI-ProteinID:
XP_022321885
UniProt:
A0A8B8D295
LinkDB
All DBs
Position
3:46333100..46363968
Genome browser
AA seq
3117 aa
AA seq
DB search
MSTVLLSVNRGQRECELLTRFHCWVSCLILLLTSLSCHHCQGTLIEKDILVKNYGLGVPI
GRRVFISPEDHLKINVSNLDKCRVTVLQSDLLFQRPGILMPKEFPCDFPDNSVHYTHHGA
KDPSEDYLHLMIHYESSNQTLIIPFVFHVQIQDVQYKILTKNTPLTVRQFAEYSDVFSDQ
NTVFSYDTDNQQCRLTLVSIATGLPRSGYIANDTSKLAVMDCDKFLQLNIMYKLFASPSS
PNKDFIPLVVEILDTDGDVMNQEFFQKTVIIESGLQNTRPQPSFNALLVMDVSQGNTIDQ
FIMTSIPPKILAAQDQETPADQLIFNVTKPLGPDQGELVSTNDRNQPLRSFYQKDIFDLK
IAYKPPKTDSNQIRSIKIELQVIDGDGLKSSPFTLSISVKPMNTLSPIVTLNKGIQMFEG
QSRQLLHSDNLQISDENNLNDVKVFIVDGVRHGHLQIPGNREYFTPKDLRDGTVFYKHDG
TDTYSDNIVFRMTDGTYDVEFLFPVTIYPVDDEPPILNRNIGLEIKKGHIVEVNRFVLSA
TDIDSEDAKILYLLQPPYSNVGRFLKRQFGAPLDPTKWQYINGVYQQKVDEFTQQDILDG
KIFYQHFGPGMTMSITDKIKLILSDRMDPPNQSQEYTFSVKILPVDDTPPQLAEGTTLQL
DVNEFQMSVIKKKNLKYTDKNTEDRNIRYRITRQPYDTDPNARLSAGALVLCDTPSNQVN
SFSQSEINHLKICYVPPNLELGLTKRIIFFYFDVEDMHGNTLKNERFVITIYPVDNKPPR
VQNRGFRVLENEEFTINQNTLVIKDPDTENSLLKVIITRLPRHGILKNFQQPLIQNDRIT
LGDIMSGNIIYKNLGSEVTEDSFNVYVTDGIHHVPVVVRIKIDPVDDEPPTFVGDQSDVL
FVTSKTDEGGSTADWNRDIRATDPDTNDLDLTFSIKTHPRFGRILMNNRPVTTFTQKNLI
DKIVIYRHTSGEIGVEATNDSFELTLIDSSKRLEVKNNNVKTVQVQIKILPVNNKSPQII
FGAPYGVIEGGKSPILPRHLDALDEDTTYNFLQCIITKQPSFGYLENISPAPGSEKSQQG
IPISAFYVEDLRLGNINYVQSVHKGVEIRNDDFQCYCSDGINQSPISNFPIVVYPENDEE
PEVFIREFIVMEGMELKIDAPILKAVDKDDPKGSLTYIISRPPHHGQIIQQRTIAGTFPV
SSFNENDIARSSTIMYKHDDSETLRDSFEFILTDGKFNITRTIPIVILPIDDETPRLSVN
NGLDIEVVGGKKLITNNHLRAEDIDSEDSKITFVIRGYPRYGFILKRGHDGIVRNLTLHM
NFTQYDIDNNRVWYIHSSSESGQDIIKFDVTDGLNPIVDRYFYVTIAELDIIYPHVVSRG
VQLPEGGFVTLTTDMIGATDINSPDENLIFTITQAPIHGYLESTDAPGVPIVTFTQLDLA
GSKIRYVHNSNSEIKMDGFQFEVTDGNNPVTRTFRIAITDVDNKKPVLFCNNLRIQEGGN
KIITPFELRVEDLDTPNKRITFYITQVPLHGNILKNFSQTVNTFSYEDIVKNLITYQHDG
TETTRDEFSFTITDNTNVDFYVLSDMSLPTRLPQTLTIEVVPVDNGIPHVSVNKGITSLA
YLPDGRIGAKLTSKVLQAEDRDSADDSLTFLLTVSPEHGHLVNIGNGSSSINSWTQEDIN
EGRIFYLLNSGSNATDDAFFFKLRDKGGNVLPNQPFHLTWCFISFTAARQEVNETNTLVI
ELQRRGYLQETVFVTIIAVNGSARVGIDTHKWFNPQIQFNPGQTLKTWTLHIVNDNQYEC
TEDFQLRLSDPVSGILEYPQVSNFTITDPEDEPVVELLWRERHVSENIGEIFVPVRRTSG
DLRDELMVICGTVSGTAVGTPPGQILSGSDFFGRPFDQRSVIRFGPKETDKVCRVTVIDD
SLYEAEESFKVVLADVLGGQIGVRNETVIFIEADAKDEPQFSFEKSEYVVDESEQQVEVG
IRRSGTDLSKPSSVTIRSRMTNPKSAQAGLDYIAVNKILDFAPGVTLNTVTIQILDDLGR
PQLEGVEHFQIVLKSTIGGSLGSPDKATIYINDSQSDVPFMEFEDPEYFINEEKGFVEAV
IVRSGDITHDSNVRCYTRQDTAKVSEDFKERMDTDSSRIYFQPGERQKKCRVYIVNDNTY
EPDSEVFRLVLGNPESKAAGLAKVGRMNSTRIRINDDSDKPIIKFSRPRYFVNEPLLPGD
VSKVSVLVLRLGDTSGVSKVLFHTKDGSAVSKSDYDPVAKELLFNPGMTTLLVEILIRYD
MVTEISEVFTVHLGQDRNGIAEVKRNDRAQIVIEEKNRLADVVFPLRPLVVSLRDYDAGA
RADLSPINGYPVICVTACNPKHPKYLDMSQICRNLGIDDDSTRFRWKVAAPTHGSGVTHP
LEDIKSTAFFASSTGITLDSIYFTAGSRVQCIARAFNLMGHPGKEVASEPVTIDTKRGIC
MSKEAGIPENNPYTATIRYQGPKSKEHPNMVRISVTIPHNDGLLPVVSTYQPSNFDYILT
PSSLRVAQHQCSNLLDATEHLGGFTSNATRHRNSIGDAEPYQHDAVLRSAPTLRFYRDLD
LESCTWEITGYFHMSELVSKCGAQIRSDGQPISSILSAVTLDVWVFVSYVRYSPTVPGAW
FHQDHQINLPLTFVYNTGIMWKNGIVSPSTVDVRGNLYPSAMRVLQDGRLHVSFTTRAGF
NGKFIHPQSQDVIDKGLSSAVTSSEHPELTMSLQLLGGDSTFNQPEQHWQFESNVAVEDY
TGTYNITLVPCLLPVNKPYSLDTPCDPQPPVSFSLPVYFQQISDPVPTEYTLNTDLTLTR
KRDQWLSKETRKFRPNLGAAFAPGEKIYGKIEMNDVQRMGDHLQVSLEKVYLCSGKDGYI
PTFDPENGQYGCLSQFENLEYHMKVIDRLAPFTVNKDLNGVPLLAKLAEEEGALTLVKQP
GADGFVIDTEPLFKSDPNRLWFLHVVYNLQSPNSINDRIAPYHALPGENTALPWLRRRQR
RSPEDMQGLGLAGKKGTNMIRIVLIEEHQVAEEEKDLTAGVSEVSEDQGGERSSLIPILV
GIAVLLCLTLVLLIFIIRKKRKESSPPPTPDSTMTVVSTGPRKVVVKIDTNGDFTEV
NT seq
9354 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgtactgctatcggtcaatcgaggacagagagaatgcgagctgttgaccaga
tttcactgctgggtttcctgcctgatccttttgttgactagtttgtcatgtcatcattgt
caaggaactctaatagaaaaagacattcttgtgaaaaattatggtctgggtgttcctatt
ggccgtcgggtgtttattagtccagaagaccatctaaaaatcaatgtaagtaatttagac
aaatgtcgagtgactgttttgcagagtgatcttttatttcaaagaccagggattttaatg
ccaaaagaatttccgtgtgactttcctgataattctgttcattatactcatcatggagcc
aaagatccctctgaagattatcttcatttaatgattcattatgaatcttccaatcaaacc
cttatcattccgtttgtatttcatgttcaaattcaagatgtgcaatataaaatactgacc
aaaaatactccattgactgtgagacaatttgcagaatacagtgatgttttttcggaccag
aacacagttttttcttatgatacagataatcaacaatgcaggttaactcttgtatccatt
gcaactgggttacctcgaagtggatatatagctaatgacacctcaaaattagctgtcatg
gactgtgataaatttttacaactcaacatcatgtacaaactttttgcatcccctagctct
cccaacaaagatttcattccgcttgtcgttgagattttggacacagatggtgatgtgatg
aaccaggaattttttcaaaaaacagtaataattgaatcaggactccaaaacacaaggccc
caaccaagctttaatgctcttctagtcatggatgtaagtcaggggaatactattgatcag
tttataatgacatcaattccacccaagattttagcagcccaggatcaggaaactcctgct
gatcaattgattttcaatgtaactaagcccctaggacctgatcaaggtgaattagtcagc
actaatgatagaaatcaaccactgagatcattctaccaaaaagatatatttgatttgaaa
attgcctacaaaccaccgaaaactgactccaatcaaattaggtccatcaaaattgaactg
caagttatcgatggagatgggctaaaatcatcacctttcactctctccatctctgttaaa
ccaatgaatactctgtcacccattgtcacgctgaacaaagggatccaaatgtttgagggg
caatcccgacagcttcttcattctgataatttgcagatttctgatgaaaataatttgaac
gatgttaaagttttcatagtggatggggtgaggcatggtcatttgcagattcccggaaac
agagaatattttaccccaaaggatcttagggatggaacagtgttttataaacatgatgga
acagatacatatagtgacaatattgttttcagaatgacagatgggacatatgatgtagaa
tttttatttcctgtaacaatataccctgtagatgatgagcctccaattttaaataggaac
ataggacttgaaataaaaaaaggacacattgtggaagttaatagatttgttttaagtgca
acagatattgacagtgaagatgctaaaattctatatttattacaacctccttattcaaat
gttggcagatttctcaaaagacaatttggtgctccgttagatcctaccaaatggcaatat
attaatggagtgtatcagcaaaaggtggatgaatttacacaacaggacatcctagatggc
aaaatattttatcagcattttggaccagggatgaccatgagcatcactgacaaaatcaaa
ttgatcctatccgacagaatggacccgcctaatcaatcacaggaatataccttctctgtg
aaaattctgccagtggacgatactcctccgcagcttgcagagggcaccacgcttcagctg
gatgtcaatgaatttcaaatgtcagtaattaagaaaaagaatctaaagtacacggacaag
aatacagaggataggaatatcagatatcgcataacacgacaaccttatgatacagaccca
aatgcacgtttatcagcgggagcattggttctctgtgacactccctcaaatcaagtcaat
agtttttcacaatctgaaatcaaccacttgaaaatttgttatgtgcctccaaatcttgaa
ctaggtttgacaaaaagaattatctttttttatttcgatgtggaagacatgcatggtaat
actctgaaaaatgaacgatttgtgatcaccatttaccccgtggacaataaacctcctagg
gttcaaaacaggggcttccgggtcttagaaaatgaagaatttaccataaatcaaaacact
cttgttataaaagatccagacacagaaaattccttgttgaaagtcattatcacccgatta
ccaagacacggaattctaaaaaacttccagcaacctttaattcaaaatgacagaatcaca
ctgggtgatattatgagtggaaacatcatttataaaaacttggggagtgaggtcacagaa
gatagttttaatgtttatgttacagatggtattcatcatgtacctgtggtagttcgaata
aagattgacccagtggatgatgaacccccaacctttgtaggtgaccaatcagatgttctc
tttgtcacttcgaagactgatgaaggaggaagtactgcagactggaatagggacatcaga
gcaacagatccagatacaaatgatctggatctgactttcagcatcaaaacccatcccaga
tttggaagaattttaatgaacaatcggcctgtaactacatttactcagaaaaatttgatt
gataaaattgtaatctatcgacacacaagtggagaaattggagtagaggctacaaatgat
agttttgagctaactttgattgacagctcaaagagattagaagttaaaaacaataatgtt
aagaccgttcaagttcaaattaagattttgccagtcaataataaatctcctcaaatcata
tttggggccccatatggggttattgagggtggaaagtcccctatattaccccgacatctg
gatgcattggatgaagataccacatacaattttctccaatgcataattactaaacagcca
tcatttggttatttggaaaatatttcacctgctccaggttcagaaaaatcacaacaaggg
attccaatatcagcattttatgtggaggatttgaggttaggaaatataaactatgtacag
agtgtccacaaaggagttgaaatccgaaatgatgattttcagtgttattgtagtgacgga
atcaatcaatcacccattagtaactttcccattgtcgtatatccagaaaatgatgaagaa
ccagaagtttttattcgtgaatttattgtaatggaaggtatggagttgaaaattgatgct
cctatcttgaaggctgtggacaaggatgatcccaaagggtccttgacctatataatatca
aggccaccacaccatggtcagatcatacagcaaagaacgattgcgggaacttttccagtg
tcgagttttaatgaaaatgatatagcaaggtcttcaaccattatgtataaacatgatgac
tccgaaacgcttcgagattcctttgaattcattctaacggatggcaagtttaacattacc
cgcactattccgattgtcattttacctatagatgatgagactcccagactgtccgtaaac
aatggactggacattgaagtggttggaggaaagaaactgatcactaataatcacctgaga
gcagaggacatagattcggaggattccaaaatcacctttgtcattagaggctacccgaga
tacgggttcattttgaaaagaggacatgatggaattgtaagaaatttaaccctgcacatg
aattttacccagtatgatattgacaacaatcgagtttggtacatccattcaagcagtgag
agtggacaagatattataaaatttgatgttacagatggcctgaaccccatagtggatcgt
tacttttatgtgaccattgcagagcttgatatcatctatccccatgtggtcagtcgaggg
gtgcagttacctgagggagggttcgtaaccttgaccactgacatgattggtgccaccgac
atcaactctccagatgaaaacttaatatttactatcactcaagctccaattcatggatat
ttagagtcaaccgatgcacctggggtacccattgtgacctttacccaacttgaccttgct
gggagtaagattcgatatgttcataattcgaattctgaaatcaaaatggatggcttccag
tttgaagtaaccgatgggaataaccctgtgacgagaacttttagaatcgccatcactgat
gtggacaacaagaaacctgtactgttttgtaacaacctcaggattcaagagggcgggaat
aaaatcatcactccttttgagctgagagtggaggatttagacacgcctaacaaaagaata
actttttacattacacaagtcccactacatggaaacatcctgaaaaacttctcacagaca
gtgaacacattttcttatgaggacattgtgaagaacctgattacctaccaacatgatggg
accgagactacaagagatgaattctctttcaccattacggacaacaccaatgtggatttc
tatgttctgtccgatatgtccctcccaacaagacttccacagacgctgaccatagaagta
gtgccggtggacaacggaattcctcacgtatctgtaaataagggaattacctcccttgcc
tacctacctgatgggaggataggggccaagctgaccagcaaggtcttacaggcagaggat
agggatagtgctgatgacagcttgactttcctcctgaccgtttcaccagaacatggccat
cttgtcaacatagggaatggaagcagctccatcaactcatggactcaagaggacattaat
gaagggcgcatcttctacctgttgaattctggaagcaatgcaacggatgatgccttcttc
ttcaagctccgagataaaggaggaaatgttttgccaaaccagcctttccatcttacgtgg
tgcttcatatccttcacggcagctcgacaggaagttaacgaaacaaacaccttagtcatc
gagttgcagagaagggggtacctacaagaaacagtgtttgtcacgataattgcagtcaac
gggagcgctagagtgggaattgatacgcataaatggtttaatccccaaattcaatttaac
ccaggtcagacattaaaaacatggacccttcacattgtgaatgataatcaatatgaatgc
actgaagatttccagctgagattgagtgacccggtttcagggattttagaatacccacaa
gtttctaacttcaccattacagatccagaggatgaaccagttgtagaattactgtggaga
gagcgacatgtatcagaaaacattggagaaatttttgttccagttcgtcgtacgtcagga
gatcttcgagatgaacttatggtcatttgtggaactgtgtcaggaacagcagttgggaca
cccccaggccagattctgtcggggtcagacttttttggtcgaccatttgatcagcgcagt
gtcataaggttcggacccaaggagacggacaaagtctgcagggtgactgtcattgatgat
tctctatacgaggcggaggaaagcttcaaggtcgttctggcggacgtcttgggtggacag
atcggggtcagaaatgaaactgtcatcttcatagaggctgatgctaaagatgagcctcag
ttttcatttgagaaatcagaatatgttgtggatgaaagtgagcaacaagtggaggtggga
atccggcgaagtggaacagatttatccaaaccatccagtgtgaccattcgctcacgcatg
accaatcctaagtctgctcaagcgggattagactacattgctgtgaacaagatcttggac
tttgctccaggcgttacattgaacacagtaacaatccagatcttggacgacctcggacga
cctcaactggagggggtagaacatttccagattgtgttgaagtccaccattggggggtcg
ttggggtcaccagacaaggccactatctacatcaatgatagccaatcagacgttcccttc
atggagtttgaggaccctgaatattttatcaatgaagaaaagggttttgtggaggcggtc
attgtcaggtcaggggacataacccatgactctaatgtcaggtgctacactcgacaggac
actgctaaagtgtctgaggatttcaaggagagaatggacactgacagttccagaatttac
tttcaaccaggtgagagacagaagaagtgcagggtgtacattgtgaatgacaacacgtac
gagccagattctgaggtattccgcctggtgctgggtaatccagagagcaaggcagctgga
ttagctaaagtcggaaggatgaactctacaagaattcggattaacgatgactcagacaag
ccaatcatcaagttttcccgtcctagatactttgtcaatgaaccccttctcccaggagat
gtctccaaggtgtctgtgctggttttgagactgggagatacttcaggggtatcgaaagtt
ctgttccacaccaaagatgggtctgctgtcagtaaaagtgattatgatcctgttgcaaaa
gaattgctgtttaaccctggtatgacaactttacttgtggaaattttgattcgttatgac
atggtaacagagataagtgaggttttcactgtgcatcttggtcaggacagaaatggaata
gctgaagtaaagagaaatgacagagcacagattgtgatagaggagaagaaccgcttggcc
gatgtggtgtttcctctgagaccgctggtggtttcgctgcgggattatgacgcgggggct
cgggcagacctcagtcctatcaatggctacccagtgatctgtgtcaccgcatgtaatccc
aagcatccaaagtacctagacatgtcccagatctgtagaaatcttggaattgatgatgac
tccacacgattccgctggaaagtggctgccccaacacacggaagtggagtgactcatcca
ctggaagacattaaatccactgcctttttcgcatcttcgactggaattactctggacagc
atttactttacagcaggaagcagagttcagtgcattgcccgggccttcaatttaatggga
catccaggaaaggaagtggccagtgaaccagtgactattgacactaaaagaggaatctgt
atgtcgaaagaggcaggaattcctgagaataatccttacacggcaacaataagatatcaa
ggccctaaaagcaaggaacaccctaacatggtgaggatttcagtcaccattccccataat
gacggccttcttcctgtggtctccacctatcagccctccaactttgactacatcctgacc
cccagtagccttcgggtggcgcagcatcagtgttctaatctgctggatgccactgaacac
ttgggagggttcacgtccaatgctacgcggcataggaactccattggtgatgcagagcca
taccaacatgatgcagtcttacgttcagcacccactctcagattttacagggatttagac
ctggagtcctgtacatgggagatcactggatatttccacatgtctgagctggtgtcaaaa
tgtggggcacaaatcaggtcagatggacagcccatttcctccatattgtcagctgttact
ttagatgtctgggtgtttgtgtcctatgttaggtactcacccacagtcccgggggcgtgg
ttccaccaggatcatcaaattaacctcccactcacattcgtttacaacactggcatcatg
tggaaaaatggaattgtctccccttccacagtagatgtcagaggaaatttatatccctcc
gctatgagagtccttcaagatggcagacttcatgtgtccttcactacgagagctggattc
aatggaaaattcattcatcctcaaagtcaagatgtaattgataaaggcctctcatcagcc
gtgacctcctctgagcacccagagctgaccatgtccctccaactcttgggaggagactct
acattcaaccaaccggaacaacactggcagtttgagtccaatgttgcggtggaggattac
actggtacctacaacattaccctggttccctgcctcctccctgtcaacaagccctactcc
ctagacaccccctgtgatccccagcccccagtctccttctccctcccagtatatttccaa
cagatcagcgaccccgtcccaacagagtataccctcaatacagacctcactctgaccagg
aagagggaccagtggctctccaaggaaaccaggaaattccgaccaaatctgggggctgcc
tttgctcctggggagaaaatctatggcaaaattgagatgaatgatgtacagaggatggga
gaccatttacaggtctccctggagaaagtctatctctgctctggcaaggacggatacatt
ccaacgtttgatcccgaaaatggccaatatggctgcttgtcccagtttgagaacctggaa
tatcacatgaaagtaattgaccgcttagctccttttactgtcaataaagacttgaatgga
gtgccattgttggctaaactggcagaagaggagggagctctgacattggtcaaacagcct
ggagcagatggatttgtcattgacacagagccattgttcaagagtgatccaaacaggctt
tggtttttacatgtcgtatacaatctacaatcgcccaactccataaacgacagaattgca
ccgtaccatgccttgcctggagagaacacagctctaccttggctgaggagaagacaaagg
agatctcctgaggacatgcaaggattgggtctcgcaggaaagaagggcaccaacatgatc
cgaattgtcctcattgaggagcatcaggtggcggaggaggagaaggacctcacagcagga
gtgtctgaggtgtcagaggaccagggaggagagaggtcctcactcattccaatacttgtg
ggaatagccgtgttactgtgtttgactcttgtactgctgatttttataatccgtaaaaaa
cggaaggagtcatcacccccacccacccctgatagtacaatgacagtggtctcaacggga
cctcgtaaagttgtggtgaaaattgacacaaatggtgactttacagaggtgtag
DBGET
integrated database retrieval system
