Crassostrea virginica (eastern oyster): 111123818
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Entry
111123818 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute-2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111123818
03036 Chromosome and associated proteins [BR:
cvn03036
]
111123818
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111123818
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111123818
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111123818
microRNA pathway
RISC loading complex
111123818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
111123818
NCBI-ProteinID:
XP_022322138
UniProt:
A0A8B8D231
LinkDB
All DBs
Position
1:20571017..20597711
Genome browser
AA seq
968 aa
AA seq
DB search
MFPIAPGITSILHNQQLNGGQTPFSPFPAMQEGQSSIPFSTFPTEGQSSGLPFTSFPTDG
QTSIPFSAFPPVQPPEGGFAFPPPQPPPGPPSGPPXGSPGPPKPSDFICPPRPNYGTEGK
PILLRANHFQVRIPKGVLHHYDISIVPDKCPRRVNREIIETMVTAYSQKIFSGQKPVFDG
RKNLYSREPLPIGRDKVELEVTLPGEGKDRVFNITMKWVQQISLFGLEEALQGHTREIPQ
DAITAVDIIMRHLPSMTYTPVGRSFFSPPEGYDHPLGGGREVWFGFHQSVRPSHWKMMLN
IDVSATAFYKAQPVIEFMCEVLDIKDVNEQKRPLTDSQRVKFTKEIRGLKVEITHCGTMR
RKYRVCNVTRRPAQTQSFPLQLDSGQTVECTVARYFLERYKMKLQYPHLPCLQVGQEQKH
TYLPLEVCNVVGGQRCIKKLTDMQTSTMIKATARSAPDREREINNLVRKANFNADPFLQT
FGININPMMCDLQGRVLNPPKILYGGRTKAQAVPNQGVWDMRGKQFYSGTEIRVWAIACF
APQRTVREDALRNFTQQLQRISNDAGMPILGQPCFCKYATGPDQVEPMFRYLKNTYQGLQ
LIVVVLPGKTPVYAEVKRVGDILFGLATQCVQAKNVNKTTPQTLSNLCLKINVKLGGINN
ILLPHIRPSIFREPVIFLGADVTHPPAGDASKPSIAAVVGSMDAHPSRYSSTVRVQQHRQ
EIIQELSSMVRELLIHFYKATRFKPTRIIFYRDGVSEGQFQQVLQHELRALREACMKLEL
GYQPGITFIVVQKRHHTRLFCADRKDQIGRSGNIPAGTTVDVGITHPTEFDFYLCSHAGI
QGTSRPSHYHVLWDDNRFNADELQTLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYH
LVEKEHDSGEGSRHSDNSEDRTPSAMARAVTVHPDTTKVMYLPDPGRELHGLMCSFLGGR
ILCIYCIQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgatagcaccaggtatcacaagtatactgcacaaccagcagcttaacggtgga
cagactccattttcacctttccctgctatgcaggaaggtcagtcatccattccattttca
acatttccaacagaaggtcagtcttcaggacttccattcacctctttcccaacagatggc
cagacttcgattcctttttcggcattcccaccagtgcagccaccagagggagggttcgcc
tttccacctcctcaacccccacctggacccccttctgggccccccnaagggtccccgggg
cctcccaaaccgtcggactttatatgtccgccccgtcccaactatgggacggagggcaaa
ccaatcctactgcgtgccaatcacttccaagtccgtattcccaagggagtgcttcaccat
tacgatatttctatagtgcctgacaaatgtccacggagagtcaacagggagattatcgag
acaatggtcactgcttatagccagaaaatcttctcaggtcaaaaaccggtgtttgatgga
cgcaaaaatctctacagtcgcgagcctcttcccattgggcgagataaggtggagctggaa
gtcaccctgcctggggagggcaaggatcgggtctttaacatcacaatgaagtgggtccaa
cagatcagtctgtttggtctggaggaagcactccaaggtcacaccagggaaatcccccaa
gacgcaatcactgctgtggatataatcatgcgtcacttgccaagtatgacatacactcct
gtgggacgttcgtttttttccccaccggagggatatgatcaccccctgggtgggggtagg
gaggtgtggtttggctttcatcagagtgtgagaccctcccactggaaaatgatgctcaac
attgatgtatccgccactgccttttacaaagcccagcctgtgatagagttcatgtgtgaa
gtgttggatatcaaggacgtcaacgaacagaagcgccctcttacagactcccagagggtc
aaattcaccaaggagatcagaggtctgaaggttgaaatcactcattgtgggaccatgaga
cgtaaatatcgggtgtgtaatgtgacccggaggccagcccagacccagtcgttccccctt
cagctggactctggacagactgtggagtgcaccgtggctcgctactttctggaaagatac
aaaatgaaacttcaatatccccacttgccatgcttacaagttggacaagagcagaagcac
acatatctacccctggaggtctgtaacgtggtaggaggacagaggtgcatcaagaagctg
accgacatgcagacatccaccatgatcaaggccactgcccgatctgcaccggacagggag
agagaaatcaacaaccttgtgaggaaagccaacttcaatgctgacccctttctgcaaacc
tttggaattaacatcaaccccatgatgtgtgatctccagggtcgtgttctcaatcctccc
aaaatcctctatggaggaaggaccaaagcccaggctgtgccaaaccagggagtgtgggac
atgagggggaagcagttctactcggggacagagatccgggtgtgggccatcgcttgtttc
gctccccagaggactgtccgagaagacgctcttagaaacttcactcagcaattacaaagg
atctctaatgatgctgggatgccaatcctgggacagccctgtttctgtaaatatgctact
ggcccagatcaggtggaaccaatgttccgatatctcaaaaacacgtatcaaggactccag
ctcattgtcgtggttctgccggggaaaacaccagtgtatgctgaggtgaagcgtgtgggt
gatattttatttggattagccactcaatgtgttcaagccaaaaatgtgaacaaaacaacc
ccccagactctttcgaacctctgcctcaaaatcaacgtcaagctagggggcatcaataac
atcctgctaccacacattcgtccctccatatttagagagcccgtcattttcctgggcgct
gatgtgacacacccccctgcaggagatgccagtaaaccctccattgctgcagttgtaggc
agcatggacgcccaccctagccgctactcctccacggtgagggtgcagcagcaccgacag
gagattatccaggagttgtcctccatggtgagggagctcctcatccacttctacaaggcc
acacgcttcaagccaacccgcatcatcttctaccgagacggtgtcagtgagggacagttc
cagcaggtgcttcaacatgagttgcgtgctctgcgtgaggcatgcatgaagctggagttg
ggttaccagccaggaataacatttattgtggtacagaagagacatcataccaggctgttc
tgtgcagataggaaggatcagataggccgcagcggaaacatcccggcaggaacaacagtg
gatgttggaatcactcaccccaccgagtttgacttctatctgtgtagtcatgccggtata
cagggcaccagtcgtccctctcactaccacgtcttgtgggatgataaccggttcaatgcc
gatgaacttcagaccctgacctatcagctgtgtcacacctacgtccgctgcactcggagc
gtgtccatcccagcccccgcgtactatgcacatctagtcgccttccgagcgcgctaccac
ctggtggagaaagagcacgacagtggggagggcagtcgccactctgacaacagtgaggac
agaaccccctctgccatggcccgtgcggtcaccgtgcaccctgacaccaccaaagtcatg
tatttgcctgatccagggagagaactccacggtctgatgtgttccttcttaggagggaga
attctctgcatttattgtatacagtga
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