Crassostrea virginica (eastern oyster): 111123844
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Entry
111123844 CDS
T09197
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111123844
04082 Neuroactive ligand signaling
111123844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111123844
Ion channels [BR:
cvn04040
]
Ligand-gated channels
GABA-A
111123844
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Temptin_C
Cu2_monooxygen
Cu2_monoox_C
Gemin6_C
Motif
Other DBs
NCBI-GeneID:
111123844
NCBI-ProteinID:
XP_022322179
UniProt:
A0A8B8D3S3
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Position
3:56126656..56139671
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AA seq
832 aa
AA seq
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MVLFCKRFTVLLVAWVLPATLSFPQFQSLVPNGNKVPHPCSEGAWSAVGHVNPEGGHLRN
VFGNDFAALGMVWSETICQADSDGDGRTNGEELGDPNCTWSQGQALTAPATGHPGVCEPM
DDERCKGKNDWVVCNKQTELECDVLGDSETQFFDVKFPKRKVPAQETTYTCIIVEVPEVE
DHHMVANKPLIDNEKVVHHLLVYGCGGKVRRKLNTPYECGMEASAACRDLIGVWGFGSKG
ECMHPDAGFRLGKNGYTHIAVQMHWTNKHQHSDYYDGSGIRIFYTRTLRLHDAGTLWLGQ
MFFEIPPETPETNVQGVCTSECTSKIFTENLTIFGATNHMHMLGIRGKVEHYRSGERVGF
ITNDAHYTYDSPVQHRLCYGTSPEMNSSVIDNLLSNYDIRLRPNFGDDAVDVGLELIVAS
FDSVSEVNMDYTITIYLNQYWTDERLTHGDLSPAASITLTGDFAERIWVPDTFFANDKNS
FLHDVTEKNKMIRLYGNGSIVYGMRFTTTLACMMDLRDYPLDEQNCTVEIESYGYDMDDL
YLHWRSGRSSVHGIQDIDLPQFSVVEYRTVEKIESLLTGKYPRLSLSFKLHRNVGYFIFQ
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIY
LVTCFVFVFAALLEYAAVNYTYWGKRAKKKRQAKGEAGKAKSAKGETRGDRDDGVKHTSV
DNPDMSPVISLRGIKETKIDLEPGNTSFIPRACMSRGYIPESLIKRKRSSSLKIQRHTEA
KKVHAQGKNKTTCIFGMLSIEDVNSIDRCSRLLFPGLFLMVNLLYWGYYLVL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggttctattttgcaaaagatttacagtacttctggtggcctgggttctaccagcaact
ctctccttcccacagttccagagcctggtccctaacgggaacaaggtcccgcacccctgt
agtgagggggcgtggtcagctgtaggccatgtcaacccagaggggggacatctaaggaat
gtgtttggtaacgactttgcagcgcttggaatggtttggtctgagactatttgtcaggct
gactcggacggcgacgggaggacgaatggggaggaattaggggacccaaattgcacctgg
agccagggtcaggcattgacggcccctgctacggggcacccaggtgtgtgcgaacctatg
gatgacgaacgttgtaaaggcaaaaacgattgggtggtttgcaacaaacaaacagaactg
gagtgtgacgttttgggagattctgaaacgcaattctttgacgttaagttcccgaagcgt
aaggtacccgcccaggagacaacatacacatgcataattgtggaagtaccggaagtggag
gaccaccacatggtggccaacaaacccctcatcgacaacgagaaggtcgtgcaccacctg
cttgtctatggatgtggaggaaaagtcaggaggaaactgaacacgccctatgagtgtggg
atggaagcctctgccgcctgtcgggatctgatcggcgtgtgggggtttggatccaaagga
gaatgcatgcaccctgatgccggcttccggctcggtaaaaatggctacacacatatcgcg
gtacagatgcattggaccaacaagcatcagcattccgattactacgacggctcgggaata
aggatcttctacaccaggactctccggctgcacgacgcgggtacactctggctgggacag
atgttctttgaaattcccccagaaacacccgagacaaacgtgcaaggtgtctgtacctct
gagtgcacgtccaaaatcttcacagaaaacctcaccatttttggagccaccaatcacatg
catatgttgggaatccgaggaaaggtggaacattatagaagtggagaacgcgtgggcttc
atcacaaatgatgcacactacacctatgacagcccagtccaacacaggttgtgctatggg
acgtcgcctgagatgaattcttccgtcattgacaatctcctcagtaactacgacatccga
ctaaggcccaatttcggagacgacgccgtcgatgtcggactggaactgattgtggccagc
tttgattcggtgtcggaggtcaatatggactacaccatcactatatatttaaatcagtac
tggacggacgaaagactgacccacggcgacctgtcccctgccgccagcatcaccctgacc
ggtgactttgccgagaggatctgggtgcccgataccttctttgccaacgacaagaattct
ttccttcatgatgtaacagaaaagaataaaatgattcggctgtacggcaatggctccatc
gtttacggaatgagatttaccaccaccctcgcctgtatgatggacctgcgtgattacccg
ctagacgaacaaaattgtacggtggaaattgaaagctatggttacgacatggacgatctg
taccttcactggagaagcggacgaagctcggtgcatggtatacaggacattgacctcccc
cagttctctgtggtggaatacaggaccgtggagaagatagagagcctcctgacaggaaag
tatcctcggttgtcgctgagttttaagctgcacagaaacgtgggctacttcatctttcag
acttacctcccctccattctcatcgtgatgctatcatgggtctccttttggattaaccac
gaagcaacctcggctagagtggctctaggtatcacaacagtccttaccatgacgacgatt
agtaatggtgtccgttcgtccttgccgcgtatatcttatgtcaaggccatcgatatttac
ctagttacatgttttgtgtttgtgtttgcggcgcttttggagtatgcagctgtaaactac
acatactgggggaaaagggcgaagaaaaaacggcaggccaagggggaagcagggaaagca
aaatcagcaaaaggagaaaccaggggtgacagggatgacggcgtgaaacatacctcagtg
gacaacccggatatgtcaccggtcatttcactcagaggaattaaagagacgaaaatcgac
ctcgaaccagggaacacttctttcattcccagagcttgcatgtcacgtggatatatccca
gaatccttgatcaaacggaaacgatcatcgagtctgaaaattcagcgtcatacagaggca
aaaaaagtccatgcgcaagggaaaaataaaactacatgtatatttggaatgttgtctatt
gaggacgtaaacagcatagaccggtgctcccgcttactgttccccgggctgtttctgatg
gtgaacctgctgtactgggggtactacctggtgttgtag
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