Crassostrea virginica (eastern oyster): 111124013
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Entry
111124013 CDS
T09197
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111124013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111124013
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111124013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_Vps41
WD40_Prp19
zf_RING_Vps8_fungal
ANAPC4_WD40
WDR55
zf-RING_5
Prok-RING_1
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_11
PHD
Beta-prop_EML
Beta-prop_HPS5
WD40
Beta-prop_NUP159_NUP214
zf-rbx1
EIF3I
PHDvar_NSD
PHD_NSD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111124013
NCBI-ProteinID:
XP_022322565
UniProt:
A0A8B8D4E6
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All DBs
Position
3:complement(24019107..24059256)
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AA seq
1378 aa
AA seq
DB search
MAEDTTNNLLNFDIEFDDEEFKSDLPTVENPTLESILNESEDYESPAEDDTSSVISAVQA
FKDSGDTTSLSSSDSNRTERGARSRQKKKVDIQKIVHGSVLKPNRLKNIAAQLHSAAERV
DAGMPTAMAVSSLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGQQYGSVSALSFNKDCTRL
LSGFAKGQITMWDLTNGKLLRTITDAHPPGSAVLHVKFTDSPVLAVCSDSGGSVFELEMK
RLIGVRTCESKCLFSGSRGEVCVVEPLHMNLTIKDHPMQDVMVVAMATLSKVLVVTLRPQ
LKVVFTHPLKGSPTCLPLLAWQFVIIQVSERDRVIDPVLVFARESTIYFFQVICNNAQDI
KCSGLQKITVPYKMLSVAWMNPRVLVAMDTNEKLHVIDVRSEEELEVFDVSSVQLVYNNS
HFKSLATGGNVSQALAMAGEEACYQTVVSHNGQLLLLGTKGVFVYTLRNWRERIDVLVKQ
NKYNEALALALSFYDGRAKAVIGLSGSSKNKKDIISGMMLDLLFEYVDLSMTTLCPEKGK
MEELEAYYQNIVPVCVDYCLHLSRTDILFGRIYDRFAVDYIARGTFLECLEPYILCDKLR
SIPPSVMKDLVEHYQAKNMLESVESCIVHLEVTSLDIHQVVNLCWSHGLYDAIIYVYNKG
MFDYTTPLEELLGILQQAVRTGIQLTDEQIRLGNKLLVYISCCLAGRAYPLGDIPDNMVA
DVKNNVFQCITRLKVKNDESTYPYLRTLLQFDTREFLNVLALAFEEKEFNTEVGIKNRQR
VVDILLQVMVESGEFTPTQIGILFTFLARQMACHENTILVNRVLFEQVLEFLANPEDDSR
HEERQQALMELLQAGGLKQVDEEKLLSMAENAKFFRVCELLYEKRRQFDKILSCYLRDPS
RKYHAFSYISSILNSERFSVEEQERLKEEAFTQLEELVAIDCKQAAQMVISTMPKNLGVI
TNKMKNNPKVLFEFLKGVMSCRDLGSSAIHTDKQVNIDPWIVELYVDQMCQFRPQEVYNY
IKLNEGYRLEQTLAICRKHKNSEATAYLLEKAGDVQGAFGIILTNLQNKLKSLTNELMSP
ESEKDVTVQFLEVEALILVVIQLCQRNSGKMDEAGRESLWFPLLETVMSPQRKLKDSNNK
QIQEDFKKATHHVLNSMMGYIALPTILHKIMQDPAYSTGKFGEVRELILGMLETYNYEQT
LMETCKNLLNHDIHVHLKNLTTAATKGYVPKGDNCSLCTKQYINQNETDTVVIFRCGHSY
HKGCLQSVGSVHVIDGEDSWICFLCSHRKRGQFQSTRFHRSLSNRGQPKGKDKMSVDPQH
SQALDFVRNFLKTPSRMSLLTELSRDFAQKSHRSSSSIFNQENFQLKLAPPPAMDSAP
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatacaacaaataatctattaaattttgacatcgagtttgatgatgaagaa
tttaaatctgatcttccaactgtagaaaaccctactcttgaaagcattttgaatgagagt
gaagactacgaatcacctgcggaggatgatacatcttccgtcatctccgccgttcaggcg
tttaaagattcaggggacacaacctctctttccagctctgacagcaatcggacagagaga
ggtgccaggtccaggcaaaagaagaaggttgacatccagaagattgtacatggatcagtg
ctgaaaccgaatcggttgaagaacatcgcagctcaactccacagtgcagctgaaagagtt
gatgccgggatgccaacagcaatggctgtttcatctttgatagccattggaacctcacat
ggactggtgctggtgtttgaccccaagcaggtgttgaagtggtgcctgggcagcaccgcg
gtggggcagcagtatggctcagtgtccgccctcagcttcaacaaagactgtaccagactc
ctctcaggctttgccaagggacagataacaatgtgggatttgacgaacggcaaactgctg
aggaccataacggatgcacatcctccaggctcagccgtcctccatgtcaagtttacagac
agtcctgttttagctgtatgtagtgacagtgggggatcagtgtttgaactggagatgaag
agactgattggagtaaggacttgtgaatccaaatgtctcttctcagggagtcgaggagaa
gtttgtgttgtagagcccctacacatgaacctcactataaaagatcaccccatgcaagat
gtcatggtggtggccatggcaacactgtcaaaagttttggttgtaacattgagacctcaa
cttaaagtagtttttacccatccactaaagggcagtcctacctgtctacccctcctggcc
tggcagtttgtcatcatacaggtgtcagagagggacagagtcattgacccggtgttggta
tttgccagggagtcaaccatctacttcttccaggtgatctgtaacaatgctcaggatatc
aaatgttcaggtctacagaagataacagttccatacaagatgctgagtgtggcttggatg
aatcctagagtcctggttgccatggatactaatgaaaaacttcacgtcattgatgtcaga
tctgaagaggagctggaggtatttgatgtttcatctgtacagctggtttacaataacagt
cacttcaaatctctggccactggaggcaatgtcagtcaggcattggcgatggcgggggag
gaagcgtgctaccagaccgtggtcagtcacaatggtcagctgctgcttctgggcaccaag
ggggtgtttgtctacacactgcgcaactggagagagcgtattgatgtcctggtgaagcag
aacaaatataacgaagctctggccctagccctgtcattctatgatggtcgagccaaggca
gtgatcggtctcagtggtagttccaaaaacaaaaaggacatcatctcaggcatgatgttg
gatctcctctttgagtatgttgatttatccatgacaacactctgcccagaaaagggaaag
atggaggagttggaagcatactatcagaacattgtcccagtgtgtgtggattattgcttg
catttaagcagaactgacattttgtttgggaggatctatgaccgatttgcagtggattac
atcgcccgggggacattcctggagtgtctggagccatacattctctgtgacaagctgcgc
tctatcccgcccagtgtcatgaaggatctagtggaacactaccaggccaagaacatgtta
gagagcgtggagtcctgtatagtccacctggaggttaccagtctagacatacaccaggtt
gtaaacctatgctggtcccatggtctgtatgatgctatcatctatgtctacaacaaaggc
atgtttgactacaccacaccgctagaggaactgctgggcatccttcaacaggccgtccgt
acagggatacaactgacagacgaacagatccgactggggaataaacttttggtctatatc
agctgctgtttagcgggcagagcctatccactgggggacattccagacaacatggtagca
gatgtcaagaacaatgttttccagtgcatcacacgtctcaaggtcaaaaatgatgagtct
acttatccatatttaagaacactgttgcagtttgacacaagagaattcctcaatgttttg
gctttagcttttgaagagaaagagtttaacacagaagtgggaatcaagaatcgtcaaaga
gtggtggacatccttctacaagtaatggtggaaagtggagaattcacacccacacagata
ggtatcttgttcacttttctggcccggcaaatggcgtgccatgagaacaccatcttggtc
aaccgagtcctctttgaacaggtgttggagtttttagctaaccctgaggatgactctcgg
cacgaggagagacaacaggccttgatggagctgttacaggctggggggctcaagcaagtg
gatgaggaaaagttactgtccatggcagagaacgccaagttctttcgggtgtgtgagctt
ctttatgagaagaggagacagtttgacaagattctgtcttgctatctgagagatccctca
agaaagtaccatgcatttagctacatctccagcatacttaacagtgagagattttctgtg
gaagaacaagaaagattgaaagaggaagccttcactcagctagaggagttggtggccata
gattgtaagcaggctgctcagatggtcatctccaccatgcccaagaatctgggagtcatc
accaacaagatgaagaataatcccaaggttttgtttgagttcctgaaaggggtgatgtca
tgcagggatttagggagcagtgccattcacacagacaaacaggtcaacatagatccgtgg
atcgtggagttgtatgtggatcagatgtgtcagttccggccccaggaggtctacaactac
atcaagctgaatgaagggtaccgactggagcaaaccctggcgatttgccggaaacataaa
aactctgaagctactgcatacttattggaaaaggcaggggatgttcagggggcatttgga
atcattctcacgaatctacagaacaaattgaagtcccttaccaatgaactcatgtcccct
gaatcagaaaaagatgtgacagtgcagtttcttgaggtggaagcccttatactggtcgtc
atacagctgtgtcaaaggaattctgggaagatggacgaggctgggcgagagtccttatgg
tttcctctcctagaaactgtcatgtccccacaaaggaagctgaaggactcaaataataaa
cagattcaagaagattttaagaaagctacacatcatgttctgaacagcatgatgggatac
attgccttacccacaattctccacaaaattatgcaggaccctgcttacagtacagggaag
tttggagaagtaagggagttaatcctgggaatgttggaaacttacaattatgaacagact
ctgatggagacctgtaagaacttgttgaaccatgacatccatgttcacctgaagaatttg
acgacggcggccaccaaaggttatgtccccaagggagacaactgctcactgtgtaccaag
cagtacatcaaccagaatgaaactgacaccgttgtgatattcaggtgtggacacagctac
cacaaaggctgtcttcagtcggtcggttccgtccacgttattgacggagaagactcctgg
atctgcttcctgtgtagtcatcggaaacgtggccagtttcaaagcacgcgattccatcga
agtctcagtaaccgtgggcaacccaaaggcaaagataagatgtcagtggatccacagcat
agtcaagccttagattttgtgagaaacttcttaaaaactccatcaaggatgtctctactg
actgaactctcccgagactttgcccagaagtctcatcggagttcctctagcatattcaac
caagagaacttccagctgaaactggcacccccaccagcaatggattctgcaccatag
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integrated database retrieval system
