KEGG   Crassostrea virginica (eastern oyster): 111124019
Entry
111124019         CDS       T09197                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03020  RNA polymerase
cvn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111124019
  09124 Replication and repair
   03420 Nucleotide excision repair
    111124019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvn03021]
    111124019
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111124019
Transcription machinery [BR:cvn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111124019
  RNA polymerase III system
   RNA polymerase III
     111124019
  RNA polymerase I system
   RNA polymerase I
     111124019
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111124019
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 111124019
NCBI-ProteinID: XP_022322580
UniProt: A0A8B8D4G3
LinkDB
Position
3:61469199..61483027
AA seq 149 aa
MAGVLFEDIFDVKDIDPEGKKFDRVSRLFCESESFKMDLILDVNTQIYPVDLGDKFRMVL
AKTLREDGTPDDGEYNPTDTGPSRADSFEYVMHGKVYRIEGDDAGPDSSRLAAYVSYGGL
LMRLQGDANNLHGFEVDSFVYLLIKKLAF
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcgggggtgttgttcgaagatatttttgacgtaaaggatattgatcctgaaggcaaa
aagtttgatcgtgtttcaagacttttttgtgagtctgagtccttcaagatggacctaatt
cttgatgtcaacacacagatatacccagtggatttaggagacaaatttcgaatggttcta
gctaagacactgagggaagatggcacgcctgatgatggggaatacaatccaacagataca
ggtccatcccgcgctgacagttttgaatacgtcatgcatggaaaagtgtatcgcatcgaa
ggagatgatgctggtcccgattccagtcgactggctgcgtatgtatcctatggtggactg
ctgatgagactccaaggggatgccaacaatcttcatggatttgaagtcgattcttttgtt
tatctccttataaagaaattagctttttaa

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