Crassostrea virginica (eastern oyster): 111124166
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Entry
111124166 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: glycine receptor subunit alpha-3-like
KO
K05195
glycine receptor alpha-3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111124166
04082 Neuroactive ligand signaling
111124166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111124166
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Glycine
111124166
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111124166
NCBI-ProteinID:
XP_022322737
UniProt:
A0A8B8D3M6
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Position
3:28833364..28849485
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AA seq
414 aa
AA seq
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MDYRKLVDEKAEYISITPHGSSRGQTIVDEILRTYDGRVSPSDALENGAVEDTVQLYILS
LDSSDESTDFTMXFFLRQRWKDERLAHNESGVPVLELHHLAINEVWIPDIYFVNEKTAHF
HYVSVPNKMFNVFPDGSVSYSVRVTGTYTCEMDLRKFPLDKQTCFIKIESYGHSTRSLKI
RWNSPAVILSKNIKMTQXSIKDTVPFICDQQYMEYNYSCIGINFHLTRMNGFYFIHMYVP
SILIVMLSWISFWLDIEATAARVSLGILTVLAMTTQNKFTGVQQVSYVTAMNVWTAASLA
FVFLGXIEFAYINVKTRKHVRNSINKSPSNISMNSSNTHMNGSMYSFPKSEPKSLQGSQS
KYTLTSIIDVDNRSGRRVDRYARIAFPVCYLLFNICYWSFYVMWEPDQDLQLSH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggattaccgaaaattagtggacgaaaaggctgaatacattagcattacaccacatggg
agcagccgaggacaaacaattgtcgacgagatacttcggacttacgacggtcgtgtgtcc
ccttcggatgctctagagaatggagcagtagaagacactgtacagttgtatatccttagt
ctggattcttcagatgagtctacggacttcacgatgnaatttttccttcgacagcgatgg
aaagacgagcgactggcacataacgagagcggggtacccgtgctagagcttcatcatctg
gccatcaatgaagtctggatcccagacatatacttcgtaaacgagaaaaccgcccatttc
cactacgtctctgttcctaataaaatgttcaacgtgtttccggatggcagtgtatcctac
agcgtaagagtgactggtacgtacacatgtgagatggacctccgaaagtttccactggac
aagcaaacctgctttataaagattgaaagctacggacatagtactagatcactgaagatt
cgatggaattctcctgcagttatactgagcaaaaacattaaaatgacccagnttagtatc
aaggacacagttcccttcatttgtgatcagcaatatatggaatataactactcgtgcata
ggaattaattttcacttgacacggatgaatgggttctacttcatccacatgtatgtacca
tccatcctaatagtcatgctgtcctggatttctttttggctcgatatcgaggctaccgcg
gcgagggtatccctgggaatcctgacggtcctggcgatgacgacacaaaataagttcact
ggagttcagcaagtctcgtacgtcacagctatgaacgtctggacggctgcaagccttgct
tttgttttcctagggntaatcgaatttgcatacataaatgttaaaacaaggaagcatgtt
agaaattcaatcaacaaatctccaagcaacatatcaatgaacagctcaaatacccacatg
aatggaagcatgtattcttttcccaaaagtgagcccaaatctctacagggatcacagagt
aaatatacgttgacgagtattattgacgtggacaacagaagtgggaggagggtggaccgt
tacgctcgaattgctttccccgtgtgttacctattgtttaacatatgttactggtcgttt
tacgtcatgtgggaaccggaccaagatcttcagctttcccactaa
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