Crassostrea virginica (eastern oyster): 111124250
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Entry
111124250 CDS
T09197
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111124250
04082 Neuroactive ligand signaling
111124250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111124250
Ion channels [BR:
cvn04040
]
Ligand-gated channels
GABA-A
111124250
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
111124250
NCBI-ProteinID:
XP_022322813
UniProt:
A0A8B8D3Z7
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All DBs
Position
3:complement(42882873..42891404)
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AA seq
304 aa
AA seq
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MHQQALEPTEEKLTVRAICQMELRNYPLDMQMCDLRIGSFAYSVEDIVYVWRYGSLTSVQ
LSTDMTMSQFDLISHSATTCNISRKGAVHSCLLVRFGLRRHTGYFLIHIVIPCSLLVVLS
WVSFWINREATADRIALGTTTVLTMTFLALDTRDELPRVSYATALDLYVAMCFIFVLSTL
GQFAIVHSFTKKGHSDTYGSHCQDMDCDTEKPADSSRNLRPRTTDRITCTDRNTPKNRVF
ISRGESRMKVWFSSLKARGQTPEKCDQAFQANSVSEWDKVSRFVFPITFVILNIAYWSFY
LSRT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaacaggccctagaacctaccgaggagaaactgacagtaagagcaatttgtcag
atggaattacgaaactacccactagacatgcagatgtgtgatctcaggattggaagcttt
gcctactctgtggaggacattgtctatgtttggcgctacggttcattgacctctgtccag
ctgtctaccgacatgaccatgtcccaatttgaccttatcagtcattcagccacaacctgc
aatatttccagaaaaggggcggtacattcctgcctgctggtacgctttggtctccggaga
cacaccgggtatttccttatccacatcgtcatcccttgttccttgttggttgtgttgtcc
tgggtctcattttggattaacagagaggccactgcagacagaattgctctcggtacaaca
actgtgttgaccatgacctttctagcccttgacacccgcgatgagctaccccgtgtctcg
tatgcaactgcccttgacctctatgtcgccatgtgcttcatctttgttttgtcaaccctc
ggtcagtttgcaattgttcattcgttcaccaaaaaaggacatagcgacacctacggatct
cattgtcaagacatggactgtgacactgaaaaaccagcggatagctcaagaaacctgcga
ccaaggacaacagatagaatcacctgcactgatcggaacacgcccaagaaccgagtcttt
atctcaagaggagagagtcgtatgaaagtatggttctccagcttaaaggcgagaggtcaa
acaccagaaaaatgtgaccaggcatttcaagccaatagcgtcagcgaatgggataaagtg
agccggtttgttttcccaattacatttgtaattctcaacattgcttattggtcgttttat
ctatcaagaacttaa
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