Crassostrea virginica (eastern oyster): 111124294
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Entry
111124294 CDS
T09197
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111124294
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111124294
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111124294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PDCD9
Motif
Other DBs
NCBI-GeneID:
111124294
NCBI-ProteinID:
XP_022322855
EnsemblRapid:
LOC111124294
UniProt:
A0A8B8D5A9
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All DBs
Position
3:50893613..50925096
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AA seq
1356 aa
AA seq
DB search
MVTAMNEKMYEVLKKVFKHEDFKSDLQKRVVKCVLEGKKDVFISMPTGAGKSLCYQLPAV
ASTGITVVVSPLLALMQDQLEHLQLLNIPAETINSKMTAKQRTKVLGDLNKPRPKTKLLY
ITPEQAASDGCRTLIEGLVKRQMLKYFIVDEAHCVSQWGHDFRPDYLKLGSFRKIMPNVP
CVALTATATAQTVEDIIQNLRLKNPVAKFKTSCFRSNIYYDIVMKDVVHDPIEDLKRFAL
TALGRETNSEEENSVIENWSEFGCGIVYCRTRDACAEVASRLTNKGIPTKQYHAGLKADI
RETVQMDWMEGRFPVIAATISFGMGVDKPNVRFVAHWTIPKSMSGYYQESGRAGRDGDQS
YCRMYYSRRERDTVAFLINNELSKYSKNAEAQKIRKKAAESGFDAIVKFCESSDCRHWTI
AKYFGDEKPECNKSCDCCAQPKMVEKALEDVQRCAYGSMKKGVPGGAMYTVTDDDIDMYG
GGRRGAKRDFDEYSNDEEFSEYHREQEDQEVERRQRCALISKEFQKRKRNAEGEVKTDFA
PPSEDCSLREASSQKIPKLTVKIREHCLGMIEEALKNNYIGNYVDIPNKLAKSDYIPKCC
AIDVEYNVFKSNKSANVYKASIMKVVNDIKKCTGSKELHSSLIPGSENPCSTDLQTNSTD
KQMDQTPTLPDLPVLLEPEKTSLIGNISTSCQSKNNSHSPNLCSNAQCNSPEGETSSLQG
SKSFSTQFLKASELMKNMKTPVSDGKSDKCYITPVSKTFSKPPVPKITYFFERAKTVQQK
DGESEKDEKSLAETGNTKEEGSFGDDLSARKEIPHRVPKRTVSPSDQRSQETKKPKLDNT
SPSSKQLKKTADVVVRYLSPYYKDGLIVSKDIFKSMARVLSHRVQSSCQSEDQAKQECKR
LIKELFSKCGKISSEEDFSFWRLNGTIMRITRQLFVSRKSRIKLLLDNLTYKDLPLNAPA
LSDVDIVKVNERKKHEEKQQSLPPELADDPRFYVPLKHEERKNYRQVPAFLYNNKCRFIE
GTKQACVLTKSLRFDGLPENVQQLVDKFEVPNESRLVQKAILKSQLWDSAKELLPRRKDP
EYPNFKFNREYGIPLEKKLSMLSFDFFRIAETAVAAKYPQTTKTRRMIFNPSGMATFFKY
NESLLSFYVGINAVITSRSMLSPFVPEEQVESNSSGSIPSIYPISPTIDFFKTHNYNLKN
SIGFSEISSKFPHTLILLNDNDWSEDERQARALVTAMGVLLAQAKKTFPGIKARLPAPMA
VQVVNVSETALNFTYFQLNTVDFDNTEDNVKNFVWFDTNNVLFDKLMPQPWKGDEFKRTR
IESLDLDGFKKLLATVGYCADLEESLTQFHDKLIEL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagctatgaacgagaaaatgtacgaagttttaaagaaagtctttaagcatgaa
gactttaagtctgatttacagaagagagtggtaaaatgtgtattagagggtaaaaaagat
gttttcatttccatgcctactggagctggaaagtctctgtgctaccagctaccagctgtt
gcatctactgggattactgtggtcgtttctccattacttgcactgatgcaggatcaactt
gagcacttgcagctactgaacattccggcagagacaattaacagtaaaatgacagctaag
cagagaactaaggtcctaggagatttaaacaagcctagacccaaaactaaacttctctat
ataactccagaacaagctgcctctgatggctgtcggacgctgattgagggacttgtaaaa
agacaaatgttgaagtatttcatagtggatgaagcccactgtgtgtctcagtggggacat
gactttagaccagactatttaaagctgggctccttcaggaaaatcatgccaaatgtgcca
tgtgtagcattaactgctactgcaactgcacaaactgtggaagacattatacagaattta
agactgaaaaacccagttgcaaagtttaagacaagttgttttagatccaatatctactat
gatatagttatgaaagatgttgttcatgacccaattgaagatttaaaaagatttgccctg
actgcacttggaagggagactaacagtgaggaagaaaattcagtgattgaaaattggtca
gaatttggttgcggtattgtgtattgtcgtacaagagatgcctgtgctgaggtagcttct
cgtcttactaataaaggcataccaaccaagcaataccatgctggcttgaaggcagacatc
cgagagacagtacaaatggattggatggagggcaggttcccagttattgcagctaccatc
agctttggaatgggggtggacaaacctaatgtaagatttgttgctcattggactatcccc
aaatcgatgtcaggatattatcaggagtccgggagagctggtagagacggtgatcagtca
tactgcagaatgtactactccaggcgggaaagggacacggtggctttcctgatcaacaat
gaattgtccaaatattccaagaatgcagaggctcagaagataagaaagaaagctgcagag
agtggttttgatgccattgtaaaattttgtgaaagttcagattgcaggcattggacaatt
gccaaatattttggcgatgaaaaaccagaatgtaacaaatcatgtgactgctgtgcacaa
cccaaaatggtggagaaggcactggaggatgtgcagagatgtgcttatggcagcatgaaa
aaaggtgtgcctggtggagcgatgtacactgttaccgatgatgacatagatatgtacggg
ggaggaagaagaggggccaagagggattttgatgaatacagtaatgatgaagagttctca
gagtatcatcgagaacaagaggatcaggaagttgaacgcagacagagatgtgctcttatt
tccaaagagttccaaaaacgcaagaggaatgctgagggggaagtgaagactgactttgcc
cctcccagtgaagattgctccctgagagaggcaagcagtcaaaagattccaaaactgaca
gtaaagattagagaacattgccttggaatgattgaagaagctttaaagaataattatatt
gggaactatgtagacataccaaataaactagcaaagtcagactacattcctaagtgttgt
gctattgatgtggaatacaatgtgttcaaaagtaacaagtctgctaatgtgtataaagct
tccatcatgaaagttgttaatgacattaagaagtgcacaggttcaaaagaacttcacagt
tcactgatccctggaagtgagaacccatgctccactgatctgcagacaaacagtactgac
aagcaaatggatcaaacccccacactaccagacttgcctgttttgttggagccggaaaag
acttctctgattggaaacatttctacaagttgtcagtccaaaaacaattcacattctcca
aacctgtgtagtaatgctcaatgtaattcacctgaaggtgaaacctcttcacttcaaggc
tcaaaatcttttagtacccagttcttgaaggcgagtgaattaatgaagaacatgaaaaca
cctgtttctgatgggaagagtgacaagtgttatattaccccagtctccaagacattcagc
aaaccgcctgtaccaaaaattacatatttctttgaacgtgccaaaacagtgcaacaaaag
gatggagagagtgagaaagatgagaaatctttggcagagaccggaaatacaaaagaggaa
ggaagttttggtgatgatttgtcagccaggaaggaaatccctcacagggttcccaagaga
acagttagcccttctgaccagagaagtcaagaaacgaaaaaacctaagcttgataacact
tcaccatcaagtaagcagctcaagaaaactgctgatgtggttgtgcggtatttatctcct
tactacaaagacgggcttattgtttcaaaggacatctttaagtcaatggcaagggtgttg
tctcatagagtgcagtcctcatgtcagagcgaagaccaagctaaacaagagtgcaaacgg
ctcattaaagaacttttttcaaagtgtggtaaaatctcgtctgaagaagatttcagtttt
tggagactaaatggcacaattatgcggataaccagacagttatttgtatcccgaaagagc
cgaatcaagttattattggacaacttgacttacaaagatttaccattgaatgctccagct
ctcagtgatgtagatattgtgaaagttaacgaaagaaaaaaacatgaggaaaaacagcaa
agtctgccaccagaactagcagatgatccaaggttttatgttccattaaaacatgaagaa
aggaaaaactatcgtcaagttccagcatttctttacaacaacaaatgcaggtttatagaa
ggtactaaacaggcctgtgttctaacaaaatcactgagattcgatggactgcctgagaat
gtgcaacaactcgtcgataaatttgaggttccaaatgagtccaggttagtgcagaaagct
atcttgaagtcccagctgtgggactcagcaaaggaacttttgcctaggagaaaggatcca
gaataccctaactttaaattcaacagagaatatggaatccctctagaaaaaaaattaagt
atgctgtcctttgacttttttcgaatagctgaaacagcagtggccgcgaaatatcctcaa
actaccaaaacaagaagaatgattttcaatcccagtggaatggctacattcttcaagtat
aatgagtctctcctaagcttttacgttggaattaatgcagtgattacttcccgttcaatg
ttatctccctttgtgccagaggagcaagtggaaagcaacagttctggctccattccttcc
atttacccaatctcacccaccattgacttcttcaagacgcacaactacaacctgaagaat
agcataggcttttctgagattagcagtaaatttccccatactctgatattgttgaatgac
aatgactggagtgaggatgagagacaagctcgagccttggtgacagcaatgggagtcctg
ctagcacaggctaaaaagaccttcccgggtataaaagcccgacttccagcaccaatggca
gtacaagtggtcaacgtgagcgaaactgccctgaacttcacatactttcagctgaatact
gttgattttgataatacggaagataatgtgaaaaattttgtttggtttgacactaacaat
gttttgtttgacaagcttatgcctcagccatggaagggggatgaatttaaaagaactcga
atagaaagtctggatttggatggatttaagaaactgcttgctacagttggatattgtgcc
gacctggaagagtctctaacacagtttcacgacaagctcattgaactttaa
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