Crassostrea virginica (eastern oyster): 111124361
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Entry
111124361 CDS
T09197
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cvn
Crassostrea virginica (eastern oyster)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_LRWD1
LRR_5
Motif
Other DBs
NCBI-GeneID:
111124361
NCBI-ProteinID:
XP_022322922
UniProt:
A0A8B8D456
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Position
1:29865489..29887808
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AA seq
598 aa
AA seq
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MSRRPKPGNSTAAARMANHDLMDNPPYLGAGGATNVELEDDLSGNMLETCIDDTVSLSDP
KEGSKHEKKGSTAMIADQRKGVVIKDKGEQHRPRKLKQRKNKPEFDVAKEFKKCKEEDAT
RLDLSKSQITVIPNTVKDLSQLQEFYLYGNKLVTLPPEIGALTNLTKLGLSENSLTTLPD
TLQNLKNLRVLDLRHNRLNEIPEVVYNLRSLTTLFLRFNRIKHVDEAIRNLTKLTIFSLR
ENKISKLPQGIGQLVNLLTFDISHNHLEHLPEEIGNCVMLNSLDLQHNELLDIPESIGNL
KSLSRLGLRYNRLTSIPKSLANCVIMEEFNVEGNNIGQLPEGLLSSLTGLRYITLSRNAF
QSYPSGGPAQFCSVYNLNMEHNQINKIPLGIFSRASSLTKLNMKDNQLTFLPLDIGSWSN
MTELNLGTNQLTRVPEDIQNLEKLEVLILSNNLLKRLPPSIGNLKKLRVLDLEENKLESL
PQEIGQLQELTRLVVQSNQLTSLPRAIGCLSKLEYLGAGENNLTSLPAEIGTLENLESLY
INDNQDLHSLPYELVLCSNLQIMSIENCPLSQIPPEIVAKGPSLVIQYLRIQSPFCQL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtagaccgaagcctggaaactcaacagctgctgcaagaatggccaaccatgat
ttaatggacaaccctccatacttgggagcggggggtgctactaatgtagaactggaagac
gatttatcaggaaacatgctagagacctgtattgatgacactgtgtcgttaagtgatcca
aaagaaggaagtaaacatgagaagaaaggcagtacagcaatgattgctgatcagagaaag
ggcgtggttatcaaagacaaaggggaacaacacaggccccgaaaactcaaacaacgcaaa
aacaagccagaatttgatgtggcaaaagaatttaagaagtgcaaagaggaagacgcaact
cgactggatctcagtaaatcccagataactgtcatacccaatacagtaaaagatttgtca
cagttacaagagttttacctgtacggcaataagctggtcactctgcccccagagatcgga
gcattgacaaacctgaccaagctgggactcagtgaaaactcgctgaccactctaccagac
accctccagaatctcaagaacctgcgagtcctcgatcttcgacacaacagactcaatgag
atacctgaggtggtgtacaacttgaggtctttaacaacactttttctcagatttaatcgg
ataaaacatgttgatgaagccattagaaatttgacgaaactaacaatatttagcttgcgg
gaaaataagatttctaagttgcctcaaggaattggtcagctggtgaatttgcttacattt
gacatttcccataatcatctggaacatttacctgaagagattggaaactgtgtgatgttg
aattctctagatcttcaacacaatgaattgttagatatcccagaatccattggaaacctg
aagtcactttccagacttggtctaaggtataatagattgacaagcatccccaagagcctg
gctaattgtgtcatcatggaggagttcaatgtggagggaaacaacatcggtcaactaccg
gagggccttctgtccagtctgacgggtttacgctacatcacgctgtccaggaacgctttt
cagtcctatcccagcgggggaccggcccagttctgttctgtatataatttgaatatggag
cacaatcagatcaacaagatcccgttaggaattttctcacgagcatcgagtctcaccaag
ctgaacatgaaggataaccagcttactttcttgccattagatattggtagctggtcaaac
atgacagaattaaacttgggaaccaaccaattaacaagagttccagaggatatacaaaat
ctagaaaaattagaagttcttattcttagtaataatttattaaagagactgccacccagc
attggaaacctgaaaaaattgagagtgctagatttagaagaaaataaactagaatcacta
cctcaagaaataggacagttacaagagcttacacgacttgtggtacagtccaaccaactg
acaagtctgccacgggccatcgggtgtctgtctaagttggaatatcttggtgctggggag
aataatttgacctcacttcctgctgagataggcacgttggagaatctggaatctctgtac
atcaacgacaatcaggacctgcacagcctgccctacgaactggtcctctgcagcaaccta
caaatcatgagcatagaaaactgccctctcagtcaaattccaccagaaattgtggccaaa
ggaccctctctcgtaattcagtacttgcggattcagagtccattttgtcaactatga
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