Crassostrea virginica (eastern oyster): 111124362
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Entry
111124362 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111124362
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111124362
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111124362
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111124362
Cell adhesion molecules [BR:
cvn04515
]
Cadherins
Protocadherins
111124362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
TMEM154
ECSCR
Baculo_11_kDa
Fibulin_C
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
111124362
NCBI-ProteinID:
XP_022322919
UniProt:
A0A8B8D5V8
LinkDB
All DBs
Position
3:complement(63510843..63517012)
Genome browser
AA seq
835 aa
AA seq
DB search
MEPLYVVLLCFVSTAVAESLVTFTIKEDTPRFHTVGSIPDAFKLAANLTRDQFESLRYQF
LTNPERSHCDSQGNKFCYIEILTVRVIIEDINDNSPVFXSSSMRLTIPEHSSIGTSYKIH
SATDKDVGINSIQSYNIVPENGPFGLNVTKTLDGSFFVRVVIRQTLDREXQNYYQLNIRA
WMGVHPQCGVLTVHVDVSDINDNSPVFTQTTYNTSVQENVTVGSXILQCIATDKDILDNG
KVSYKFSQRSDLEMIKAKFSLNAETGQINLISQLNYGEQKLYEFFIEAYDHGEEVRMSQA
RVIINVLDAGNNAPSMDIAFFEGGNGSQLVILGREPKRMCLLPISSDDADPGQNGVVECS
ISNAAFWLQEVSSSNYVVLVKSALDYETVKSYQVTVSCQDQGSPSMSSNLSFTVNIMDDN
DNAPKFVQRLYQAFVPENKPAGMRVAEVLAKDGDSGVNAVIRYRLDGDIGLEIDSVTGVV
VTSRPLDREVTPQTSVRVLAVDQGNPPLTGTTTLFLXVQDVNDNAPRFNVSQYSFEVYEN
MNNIRVGTVYAVDLDSELNGQITYSVNDDTFEIRGNGAIFTKRALDYETQKVHTFTVTAR
DHGVQIQSTNIVRVHVIDANDNAPKCVFPDEYNHTVSLPYLTQIGSLITTVQAYDADSGR
NSHLSFQILGGNNHQTFKLDYNSGELFYDNTFVIKKDSVFRLNISVSDQGTPALSSTCVL
EVMLTHTNMSMQPFPNDNADNKYVVICVVVVIITIFFSTVLITVIIIIRRNDRRNQERKA
QQEKPEICSSSRALTTVLPDQASFQKTSAGRRRRKSASPWRMTLTNHWTSLATPF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggaacccctgtacgttgtgcttctgtgctttgtctctacagctgttgctgagagtctt
gtgacttttacaattaaagaggataccccgagatttcatactgttggcagcattcctgat
gcctttaaattggctgccaacctgacaagagaccagtttgagtccttgagataccaattt
cttacaaacccagaaagatctcactgtgacagccagggcaacaaattttgttatatcgaa
atcttgacggtgagagtgattattgaggacatcaatgataattccccagtgttcngatcc
tcttccatgcgccttactataccagaacacagcagcatcgggacttcctataaaattcac
agtgcgacggacaaagacgtgggaatcaactccatccagtcctataacatcgtaccagaa
aacggcccgtttggactgaacgtgaccaagactttggatggcagtttctttgtccgcgtt
gtcatcaggcagaccttggacagggaanttcagaactactatcagctcaacatccgggcc
tggatgggggtccacccccaatgtggagtgctcacggtacatgttgatgtttcggatata
aatgataattcaccggtgtttactcagaccacttacaacacttcggtccaagaaaatgtg
acagtaggatcgnatatcctgcagtgtattgccacagataaagacattctagacaatggg
aaagtgtcgtacaaattcagtcaaagatcagatttagaaatgataaaagctaaatttagt
ttgaatgcagaaactggacaaattaatttgatttcgcagttgaattatggagaacagaaa
ttgtatgaatttttcattgaagcctatgaccatggtgaggaagttcgaatgtcccaagcc
cgagtgatcatcaatgttttggatgcggggaacaatgctccttctatggacattgccttc
tttgagggtggcaatggaagtcagttagtgatattagggagggaaccaaagaggatgtgt
ctattgcccatatcaagtgatgacgcagaccctgggcagaatggggtggtggaatgctcc
atctcaaatgcagcattttggttgcaagaagtcagttctagtaattatgtggttttggtg
aagtcggcgctggattatgagacagtgaagtcctatcaggtgacagtcagttgtcaggac
cagggatctccttctatgtcatccaatctatccttcactgtcaacatcatggacgacaac
gacaatgctcccaagtttgtccaaagactctaccaggcatttgttccagagaataaacct
gctggcatgagagttgctgaagttctggcaaaggatggggactcaggagtgaatgctgtg
attaggtataggttagatggagatattgggctggaaattgattctgttactggagtcgtg
gtgaccagtcgccccttggacagggaggtaactccacagacctcggtcagggtactggcg
gtggatcaggggaacccccctctcacaggaaccaccactctcttcctanaagtccaagat
gtcaacgacaatgcaccgcgattcaatgtcagtcagtacagtttcgaggtttacgaaaac
atgaacaacatccgagtaggcacagtttatgctgtagatctggactctgaattgaatggt
cagataacttattcagtgaatgatgatacgtttgagatcagaggcaatggagccatcttc
acaaagagggccctggactacgagactcagaaggttcacacgttcacagtgactgctcgg
gaccatggagtccagattcagtcaactaatatcgtgagagtgcatgttattgatgccaac
gacaatgctccgaaatgcgtcttccctgatgaatataaccacaccgtcagtcttccgtac
ttaactcagattggttcccttatcaccaccgtccaagcttatgatgcagattcgggccgg
aacagccatctcagcttccagatccttggtggcaacaatcaccagacattcaaactggat
tacaactccggggaattgttctatgacaatacctttgtcatcaagaaggactcagtgttt
agattgaacatttctgtttctgaccaagggactcccgccctctcctcgacctgtgtacta
gaggtcatgctcacacacacaaacatgtctatgcagccatttcccaatgacaatgctgac
aacaaatatgttgttatctgtgttgttgtggtgatcatcaccattttcttttctactgtc
ctcattactgtcatcatcataatcagaagaaacgaccgtagaaatcaggagaggaaagcc
caacaggaaaagccagaaatctgcagcagttccagggcattgaccacggtactaccagat
caggcttccttccagaagacctcagcaggaagaagaagaaggaagtcagcttctccttgg
aggatgaccttgacaaatcattggacatctctggccactccattctag
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