Crassostrea virginica (eastern oyster): 111124418
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Entry
111124418 CDS
T09197
Name
(RefSeq) neurobeachin-like protein 1
KO
K23286
neurobeachin-like protein 1/2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111124418
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Others
Others
111124418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
Neurobeachin
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
111124418
NCBI-ProteinID:
XP_022322978
UniProt:
A0A8B8D4F4
LinkDB
All DBs
Position
3:70259531..70291956
Genome browser
AA seq
2616 aa
AA seq
DB search
MDEDTSASGTILTHCTFNFPGLNYDNVPLLGSCQFVKHLVSIGNLLSEKLTQNALQEIQI
KTFLKLTVHFFECLYDPYFVWRKRLKGWVVDKSRMTYKPAELHVEVVPFFYDCCNKSTLT
VSLKIRFLHLFGAVMCGTQSNALRVITPATLDILLQILSSSELSGPTNEQRLDLLELKDL
SLKCIVCMVHMIHGSSPDQFSSGRKIKRQVEVSQVMEGYMDVLTTSDIQSEDGFNQQMQL
SMIHAVNEMLSCQDRSALQVTLVSGGTFDSLVALLQKTSLTGSEAQSLAMSVLQVICSVL
TGSINAKERFALRVGYGKFVEALKSLGQPSMALLKGVLNLVVEEEFCEGKNHVIRNVQSA
LMLLCWLPDIQSKELQIWLADHLCALSAQKQNKMNCCNEGMISAIIRVLGRQKQIDPKAV
GLLINLLETLGTHSISAIELKQLMGHLKLDEEENQNPNFSRLMRALCTMARREGKEGAHF
FLSLIEENEMMSMPGIRKWPGGAFAFHSWICLNSRSSPPGAVEHVYRRQLYSFVSNSGCG
FEAFVTMDYDLVVSVYNRKEHCSVEVTDTSLGDEHWHSIDIVHSNSRRPFVNSHLFIYID
GNLKLGSQLKFPNVSESLTDCRIGSPCNKAVVRALMDQNQSNSSEPIKQSPLRRLFQRRK
DLSDPEVTTIPTGTHEDVWGVPICLGGLLASVAIFHETISAAQVKTLYTVGPNHPVFFSE
DDYPDFADLPSKALVYYNAKACKDGQSIDLSPNQNHGHYIGQRCVTWDIKDVINGIGGIQ
VLFPLLEQVNKGPLPDTDILQQMDLVSSMSPPPEQEDWVVVPSSSYSDSKLEQNQVSGFL
TLLRHMIHSQGTNQEAMIRTGGVATIGALLQKVNSRLIDVNVLMSVQLLVETTASVNPTL
LNMLYQYLLFDFRIWSSSEFPVRIGHIQYLSTIIKDDKKFFRKRFGVQFVLDTVRMFYSP
PPTQDKGLSPEDMKTIRVSLMSLVKYYISRDISYDELDSILKFLFAVKDQEMVCEMVDVL
ISLLEGKSKNDQLHLLMFEAEMGELLYGLLVHPGKSVIYYEKIIKVLYLLLSSDKVYEKS
KLPLRLTDIGHLGLVEMMRNCDISGPMFKRFLEQVSVQDIPQSYNSILALLQLIHYSGSD
IKLEASRQLLSILVNRPGAAKQFVKQLGWQEAITKMFIFRKTEEIQQSDSFASEDKSVEF
SLNDTIPEEMERDSESQLSDQCNKTVSVPSSLSISSCDNTNKVSSPREPNTPFYLSRTFD
DINSSEDEKSRSVSRSSSTSVEDLTAVGQRSSSISASTSSFSISDSAIDLNISVTSSREK
RVSSGFTQADTIQKALDNLGIQKICFKDTGERTEELCQNLLLILLTIMWKGVEGSDDSAW
KERGIVISWVDKLCENHELIRSSWEIKRRLLEMMIHSCTSDLKEADEEKLLWSAELDSSN
QMQQLLTSTLKSASQIIDSMKLSQDTATPSENAIQLVKLVHCFMSQDAKQDREKFSERLI
EDLMALLDNLAVWDVESDGGWKEMARLGLCLLIQYASQPDLQLCAVATAKLHMLVQTKLI
SSSAEASFLIGNLNLMVLKAVRDKTDTYSFLIPVMKALLDKASNLLNLDLLLPDLPPTNH
SPAFFDDFKTYCLSKQWTEFIENYVKPQMLHFDESTFGELESAIRDFWSECTEAMMVNMH
MKNREKGESKLKFQNKILDPFHHKESSEQKRFHNVTVQQKSQHQTTLRQWRATKRFFTGE
RGAWSEHATSLMHWKLSNQENFKRMKVKMIPNLTFDPHTEASYQRDNLGASEADIAEEIK
KMKLAREALVSKDQIDEDFIGEEDWSVISTDLRNNEPQGKEKLIIAEDCELVTMVDVIKG
RLEVTTSCIYFFDCSSNREEGGEDFKWSLSLLREIHFRRYNLRRSAIELFMVDQTNFFLN
FEPKKRNKVYSKILSLKPPNLIYTVSRSPAEMLRASGLTKKWIQREISNFEYLIELNTIA
GRTYNDLSQYPVFPWILSDYTSDTLDLENPNVYRNLSKPIGANNPKNEREVKEKYDSFED
PSGVIEKFHYGTHYSNAPGVMHYMIRMEPFTTLHIQLQSNRFDVADRQFHSIPATWQSLM
DNPNDVKELIPEFFYLSEFLVNANDFDLGRLQGCKERVNHVALPRWAKSPEDFIHKHRKA
LESEYVSANLHNWIDLIFGYKQKGPAAVEALNVFYYCTYEGAVDLDAVKDEKERKAIEGM
INNFGQTPCQLLKEPHPRRMTVEDVVARAVKADRPLSVLDFLHQLKVFFVEVAQETDPLV
YISVPRNQARSIIQHGMADTMVTISEGGIIGLHGWLPYDKSISNYFTFEKDPALANPKSK
RRMPCPFSPNLKVDSKLFTVSHDAKLLFSVGHWDNSLQVYHLGKGKKVNHIIQHTDVVTC
LALDFCGRQLITGSADTSCIVWEVIMQGGSSSYVNSKRLQTLYGHDAEITAVQISVELDT
AVSASKDGTVIVHTVRRGHYMRTLRPPCTMGYTLNIPHMVMDDMGRIVLYCHETLPIEPK
ERFSLHLYSINGQHLCTERVNHGLGHVINVGDHLITGDSQGQLCIWETFGLRQLTVLPLH
VPIHSLAITTTNSHIFAGLRDGKLIIIGVKNRSEIR
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatacgtctgctagtgggacaatcttgacccactgtacttttaattttcct
ggattgaactatgataatgtccctctgcttggttcctgtcagtttgtcaaacatcttgtt
tctattggaaatctactctctgaaaagcttacacagaatgctctacaagaaatccagatt
aagacctttctgaaattgactgtccactttttcgagtgcttgtatgacccatacttcgta
tggaggaaaagactcaaagggtgggttgttgacaagagccggatgacctataagccagca
gaactgcatgtagaggtggtgccattcttttacgactgctgtaacaagtccaccctgact
gtgtccctgaagatcaggttccttcatctttttggagcagtaatgtgtgggacacagagc
aatgccctgcgggtcattaccccagccaccttggatatccttctgcagatcctttcctcc
agtgaactgtctggaccaacgaatgagcagcgcctggatttactggagctgaaggaccta
tcactcaagtgcattgtgtgcatggttcacatgattcacggatcaagtcctgaccagttt
tcgtcaggccgaaaaatcaagagacaggtagaagtgtctcaggtgatggagggatacatg
gatgttctcacgacgtctgacatccaatccgaggatggatttaatcaacagatgcagcta
agcatgatccatgcagtgaatgagatgttgtcgtgccaggaccggagtgctcttcaggtc
accttggtcagtggagggacattcgactccttggtggccctgctgcagaaaacttctttg
acagggtctgaggcccagagcttagccatgtcggtcttacaagtcatctgttcagtcctc
acgggctccattaacgccaaagaaaggtttgccttaagagttggatatgggaagtttgta
gaagccttaaagagtttaggacaaccatccatggctttactgaaaggagtccttaatctg
gttgttgaagaagagttttgtgaaggcaagaatcatgtgatcagaaatgtccaatcagct
ctcatgttactctgttggttgccagatattcagtccaaggaactccaaatttggttggct
gaccatctttgtgctctgagtgctcagaaacaaaacaaaatgaactgctgtaatgaagga
atgatctctgctatcatcagagttttaggtcgacagaaacaaatcgatcccaaggcagtg
ggattgctgatcaacctcttggaaactcttggaactcactccatctccgcaatagaactc
aagcagctaatgggacaccttaaattggacgaagaagaaaatcagaatcccaatttttcg
aggttgatgagagcactttgtacaatggcgaggcgggaaggaaaggaaggggctcatttt
ttcctgtcactgatagaagagaatgagatgatgtctatgccaggaatcaggaagtggccg
ggaggggcctttgcattccactcctggatttgtcttaactctagatcctccccaccaggg
gcagtagaacatgtttacagaagacagctttacagttttgtatcaaactctggctgtgga
tttgaggctttcgttaccatggactatgaccttgtggtgtctgtgtacaacaggaaagag
cattgctctgtggaggtcacagacacatcactaggggatgaacactggcactcaattgac
atagtccacagtaattccagacgaccatttgtcaacagtcatctcttcatctacatcgat
ggaaatctgaaactgggatcacagctcaaatttccgaatgtctcagagtcgctgaccgac
tgccggatagggtccccctgtaacaaagccgtggtgagggccttgatggaccagaaccaa
tcgaattcctccgagccgatcaaacagtcaccgctccgacgcctgttccagaggaggaag
gacttgtccgatcctgaagtgaccaccatccccacgggaacccacgaggacgtgtggggc
gtgccgatctgcctcgggggactcctcgcctcggtcgccatttttcacgaaactatcagc
gctgcccaggtcaagaccttatacacagtcggaccaaatcatcctgtgtttttttcggag
gatgactacccagattttgctgacctgccaagcaaagctttggtttattacaatgccaag
gcctgtaaagatggtcagagcattgatttgtccccaaaccagaaccatggtcactacata
ggtcagagatgtgttacatgggatatcaaggatgtgataaatggaataggaggcatacag
gtgttatttcccctgctggagcaggtcaataagggacccctcccggacacggacatcctg
cagcagatggacctcgtgagcagcatgagcccgcccccagagcaagaagactgggtggtg
gtgcccagcagctcctactcagattccaagttagaacaaaatcaggtgtcaggatttctg
actctgctgcgtcacatgattcactcacagggaaccaatcaggaggcaatgatcagaaca
gggggtgtggccaccattggagctctgttacagaaagtgaattcgcgactgatcgatgtg
aatgtgttgatgtcggttcagttgctggtggagacgacggctagtgtcaacccgaccctg
ctcaacatgctctaccagtatctgctgttcgacttccgaatctggagcagcagcgagttc
cccgtcaggataggtcacattcagtacctgtctaccattattaaggatgacaaaaagttt
tttagaaagagatttggggttcagtttgtcttagatactgtgaggatgttttacagtccg
ccacctactcaggacaaaggcctctcacctgaagacatgaagaccatccgagtctccctt
atgagtctagtcaagtattacatatctcgagatatttcctatgatgagctggacagtatt
ctgaagtttctctttgctgtcaaagatcaggaaatggtgtgcgagatggttgatgtgctg
atctcgctgttggaggggaagtctaaaaatgaccagctccatctcctgatgtttgaggca
gagatgggggagcttctgtacgggctactggtgcatcctgggaaatctgtcatctattat
gaaaaaattatcaaggtgctgtatttgttgttatcctctgacaaggtgtatgaaaagagt
aagctccctttaaggttgacggacatcggacaccttggtctagtggaaatgatgagaaac
tgtgatatatctgggcctatgttcaaacgcttcttggagcaagtttctgtacaagatatc
ccccagagctataactccattcttgctctcctccaactcatccactactcgggatccgac
atcaaactggaggccagcaggcagctgctgtccattctggtcaataggcctggagctgcc
aagcagtttgtaaaacagcttggctggcaagaagcaataaccaaaatgttcatctttaga
aaaacagaggaaattcagcagtcagactcttttgcatctgaagataaaagtgttgaattt
tctctcaatgacactataccagaagagatggaaagggattcagaatctcaactcagtgat
cagtgcaataaaactgttagtgttcccagcagtctttcaatatccagctgtgataatact
aataaagtgtcttctccaagggagccaaatacacctttctacctttcaaggacatttgat
gatattaatagctcagaagatgaaaagtcaaggtcagtcagcaggagctccagtaccagt
gttgaggacttgacagcagtaggtcaaaggtcatcctcgatcagtgcctcaacatcctca
ttctcaatcagtgatagtgcaatagatttaaatatttcagtgacttcgtccagagagaag
cgagtgagctcggggttcactcaggctgataccattcagaaagctttagataaccttggg
attcagaaaatctgtttcaaggacactggggagaggaccgaggagctgtgtcaaaatctg
ctccttattctcctcaccataatgtggaagggggtggagggctcagacgattctgcctgg
aaggaaagaggcatcgttatttcctgggtggacaagttatgtgaaaaccacgaacttatc
cgatcctcctgggaaatcaagagacgcctgcttgaaatgatgatccactcctgtacttct
gatctgaaggaagcagatgaagagaaactgttatggtctgctgagctggattcgtccaat
caaatgcaacagctactgacctcgacccttaaaagtgcctcccaaatcattgatagcatg
aagctgtctcaagatactgcgacaccctcagagaacgccattcagctggttaaactggtt
cactgcttcatgtcccaagatgccaaacaggacagggaaaagttcagtgagaggctgatt
gaggacctgatggctctgctggacaaccttgcagtgtgggatgtggaatcggacgggggg
tggaaggagatggccagactcggcctctgtctgctcatacagtatgccagtcaaccagac
cttcagttgtgtgcagtggccacagccaagcttcacatgctggtccagaccaagctgatc
tccagctctgcagaggcctccttcctgattggtaaccttaacctgatggttctgaaggct
gttagggacaagactgacacctactccttcctcattcctgtgatgaaggcactcctagac
aaggccagcaaccttctgaaccttgaccttctgctgcctgaccttcctccaaccaatcat
agtccagctttctttgatgacttcaagacatactgcttgtcaaagcagtggacagagttt
attgaaaattatgtgaagccacagatgcttcactttgatgagagtacgtttggagaacta
gagtctgccatcagagatttctggagtgagtgcacagaggccatgatggtcaacatgcac
atgaagaaccgggaaaagggcgagtccaaactcaagtttcaaaacaaaatcttggatccg
ttccaccacaaggagtcctctgagcagaagcggttccacaatgtgactgtccagcagaag
agtcagcaccagaccactctgagacagtggagggccaccaaacgcttcttcaccggggag
agaggggcgtggtccgaacatgccacctctctcatgcactggaagttgtccaatcaggag
aacttcaagaggatgaaagttaaaatgattcctaacttgacctttgaccctcacactgaa
gccagctaccaaagagataatctaggagccagtgaggccgacattgcagaggagattaag
aagatgaagctagccagggaagccctcgtctccaaagaccagatcgacgaggacttcata
ggcgaggaggactggagtgtcatcagcactgatctcagaaataatgaacctcaaggaaaa
gagaaacttattatagctgaagattgtgaactagttactatggtagatgtgatcaaaggt
cgtctggaggtcacaacgtcgtgtatttacttctttgactgcagttctaacagagaggag
ggtggtgaagattttaaatggtctctttcactgcttcgagaaatccatttccgccgatac
aatctgagaaggagtgccatcgagctcttcatggtcgaccaaacgaacttcttcctcaac
tttgaaccaaagaaaagaaacaaagtatacagtaagattctgagtctgaagccgcccaat
ctaatctacacggtgtcaaggtcacctgccgagatgctgagagcatcggggctcactaag
aaatggatacagagagagatttcaaactttgagtacctgatagaattaaacaccatagcc
gggcgaacgtataatgatctcagccagtacccagtgtttccttggatactctctgactac
acctcagatacgcttgatttggagaatcctaatgtgtacagaaatcttagtaagccaatt
ggagccaacaatccaaaaaatgaaagagaggtcaaagaaaagtacgatagttttgaagac
ccttcaggtgtgattgagaagttccactacggcacccactactccaatgcccccggggtg
atgcattacatgatcagaatggaacccttcaccactcttcatatacagttacagagcaat
aggtttgatgtggcagaccgccagtttcactccattcctgctacctggcagtctctgatg
gacaatccaaatgacgtcaaggaactcatcccagagttcttctacctctctgaattcctg
gtcaatgctaatgattttgacctgggcaggttacagggctgtaaggagcgagtgaaccat
gtcgcactgccccgctgggccaaatccccagaggactttatccacaaacacaggaaggcc
ctggagtccgagtatgtctcagccaacctccacaattggattgacctgattttcggatac
aaacagaaaggtccggcagctgttgaggccctcaacgtcttctactactgcacttatgaa
ggagctgtggatttggatgcagtgaaggatgagaaagagaggaaggctattgaggggatg
atcaacaactttggtcagaccccatgtcagctcctgaaggagccccaccccaggaggatg
acggtggaggatgtggtggctcgagccgtcaaagctgaccgccctctcagtgtgctcgac
ttccttcatcagctcaaagtcttcttcgttgaggttgcccaggaaaccgatcctttggtg
tatatttcagtccccagaaaccaagctagatctatcatacaacatggaatggctgatact
atggtgacgatatcagagggtggtattattggcctccacggttggctgccatatgataaa
tccatctccaattatttcactttcgaaaaagacccagctcttgccaacccaaagagcaag
agaaggatgccttgcccattctcaccaaaccttaaggtggactccaagttatttaccgta
tcccatgatgccaagcttctgttcagcgtgggacactgggacaacagtctccaggtctat
cacctgggaaagggcaaaaaggtcaaccacatcatacaacacacagacgtggtgacctgc
ctggccttagacttctgcgggagacagctgattacgggatcagctgacacgtcctgtatc
gtgtgggaggtgatcatgcagggagggagtagtagctatgtaaacagcaagagactacag
acgctgtatggacacgacgcagaaataacggctgtccagatctctgtggagcttgatact
gctgtgtcagcctctaaagatggtaccgtgattgtacacaccgtacgccggggacactac
atgaggaccctccgcccgccgtgcaccatgggatacacgctaaacatcccacacatggtg
atggacgatatgggtcgaatcgtcttatactgccatgagactttgccgatagaaccaaag
gagagattttcccttcatttgtattccatcaatggacaacacttgtgcactgagagagtg
aatcatggtctaggtcatgtgatcaatgttggagatcacctgatcacgggggacagtcag
ggacagctctgtatttgggaaacttttgggcttcgacagctgacagtgctgcctctacat
gtccccatccactctctagccatcaccacgaccaacagccatatctttgcggggctgcga
gatgggaagttgatcattatcggggtgaaaaatcgttcagagattcgatga
DBGET
integrated database retrieval system