Crassostrea virginica (eastern oyster): 111124699
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Entry
111124699 CDS
T09197
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111124699
03041 Spliceosome [BR:
cvn03041
]
111124699
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111124699
mRNA cycle factors
Stress granule specific factors
111124699
Spliceosome [BR:
cvn03041
]
Common components
Common spliceosomal components
General mRNP proteins
111124699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RBD_DEAH11
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
111124699
NCBI-ProteinID:
XP_022323528
UniProt:
A0A8B8D5Y3
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Position
3:complement(62497133..62508707)
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AA seq
328 aa
AA seq
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MDEDQTNLIINYLPQSLQDEEFRKMFENIGPLKSSKIVRDKNTGYSYGFGFVDFHNPKDA
ATAISQLNGYRMEHKVLKVAYSRRNEEDTKGSKLYLQKLPPQYTEEEVSNYFSSYGNIVQ
VRVVTDRATGQSKGIGFILFSKRSEAEAALNDLDNKVPPGGTQPLRVKFADDNAKKVKAP
SQYNYYNQTPYPVHGGYGEGMGGSRGPMRNPGGRFRFNPMGNTSTYGGGYGGGSSSYGAD
YYSPPSQGGGYVLFVYNIGPEADEKTLWRMFSPLGTVTKVNVVMDHQKSQSKGYGFVTMP
NLEEAEYAILNMNGYSYNGRELSVSFKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatcagactaacctcatcataaattatctgccacaatcattgcaagatgag
gagtttagaaaaatgtttgaaaatattggaccacttaaatctagcaaaattgtgcgagat
aaaaacacaggttatagttatggctttggttttgttgatttccacaatccaaaagatgca
gctactgcaatcagtcagttgaatggatatcgcatggaacataaggttctcaaagtagca
tattctcggagaaatgaagaagatacaaagggatccaagctctaccttcaaaagctgccg
ccacaatacacagaagaggaagtgtccaactatttttcttcatatggcaacattgtacaa
gttcgtgttgtcacagatagagccactggccagtccaaaggaataggcttcatcttgttc
tctaagcggtccgaagcagaggctgctctgaatgatttggataacaaagtgccccctgga
ggaactcagcccttgagagttaaatttgctgatgacaatgccaaaaaagtgaaagctccc
tcacagtacaactattacaaccaaactccatacccagtgcatggaggttatggtgagggt
atgggtgggtcccgtggtccaatgagaaatccaggaggccgcttcaggttcaaccccatg
ggaaacactagcacctatggagggggttatggagggggaagcagtagttatggagccgat
tactacagtcctccatcgcagggaggggggtacgtcttgtttgtttataatattggccca
gaggctgacgagaaaactctttggcgtatgttttcacctcttggaactgttaccaaagta
aatgttgttatggaccatcagaaaagtcaatccaagggctatggatttgtcacaatgcca
aatttggaggaggctgaatatgctattctaaacatgaatggatattcttacaatggaagg
gaattgtctgtatcatttaaaagttag
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