Crassostrea virginica (eastern oyster): 111124955
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Entry
111124955 CDS
T09197
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04141
Protein processing in endoplasmic reticulum
cvn04310
Wnt signaling pathway
cvn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111124955
04120 Ubiquitin mediated proteolysis
111124955
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111124955
04350 TGF-beta signaling pathway
111124955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111124955
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
111124955
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Phage_TAC_12
Motif
Other DBs
NCBI-GeneID:
111124955
NCBI-ProteinID:
XP_022324032
UniProt:
A0A8B8D7C0
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Position
1:22376776..22400392
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AA seq
777 aa
AA seq
DB search
MSGGNRPSNPHGLKQIGLDQIWDDLKEGIKNVYSRQSMSKTRYIELYTHVYNYCTSVHQS
SPSGRGQARMPPRRGTNQPTGGAQFVGLELYKRLKEFLKQYLVNLLADGQDLLDEQVLSF
YTKEWEDYQFSSRVLNGVCAYLNRHWVRRECDEGTKGIYEIYSLALITWREHLFRPLNKQ
VTNAVLKLIERERNGETINTRLVSGVINCYVELGLNEDDPTSKGPTLGVYKEHFETPFLE
DTERYYTRESTEFLRQNPVTEYMKKEEARLMEEQKRVQLYLHESTQDILAKKCEKVMIEK
HLEVFHFEFQHLLDDDKNEDLGRMYQLVSRIQDGLGQLKTLLETHIYNQGIAAIDKCGDS
ALNDPKMYVQTILDVHRKYHALVMTAFSNDAGFVAALDKACGRFINNNSVTRMANSSSKS
PELLARYCDLLLKKSSKNPEEAELEDTLNQVMIVFKYIEDKDVFQKFYSKMLAKRLVQHM
SASDDAEASMISKLKQACGFEYTSKLQRMFQDVSVSKELNDQFRDHLKKTSEEPLDIDFS
IQVLSSGSWPFQQSADCTFTLPQELERSFQRFTCFYNNRHSGRKLNWLYHHSKGEVVTHC
FKNRYTLQASTYQMAVLLQFNSVDRLTVQQMEESTQLKSETLIQVLQILLKVKLLVCDDD
ENDLRPASSLELFFGYKNKKLRVNINVPLKTEVKTEQETTHKHIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVEGQKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcaacaggccttcgaatccacacgggctgaaacaaatcggccttgaccag
atctgggatgatctgaaggaaggaataaagaatgtctacagtcggcaaagcatgtccaag
acgagatatattgaactgtacacacatgtgtacaattactgcaccagtgtgcaccaatca
agtccgagcgggaggggacaggcgagaatgccccccaggaggggcacgaaccagcccacg
ggcggtgcccagtttgtgggactggagctctacaagcgcctgaaagagttcctcaaacag
tacctagtgaatctcctggcggacggtcaggatctgttggacgagcaggtgctctcattc
tacaccaaggagtgggaggactaccagttctccagtcgcgtcctgaacggagtctgcgcg
tacctaaaccgtcactgggtccgccgcgagtgtgacgagggaaccaagggcatctacgaa
atctactctctggcattgattacatggagagaacacttattccggccattgaacaaacaa
gtgacaaatgctgtactgaagctgattgagagggagaggaatggcgagacgatcaacacg
cgcctcgtcagtggcgtcatcaactgttacgtggagctggggctgaatgaggatgacccc
accagcaagggccccaccctgggggtgtacaaggaacactttgagacccccttcctggag
gacacggagcgctactacacgagagagagcacggagttcctccgacagaaccccgtcact
gagtacatgaagaaggaggaagctcgcttgatggaagagcagaagcgagtgcagctgtac
ttacacgagagcacccaggatatcctggccaagaaatgcgagaaggtgatgatcgagaaa
cacctggaggtcttccactttgagtttcagcatctactggatgatgacaaaaatgaagac
cttgggcggatgtatcagctggtgtccagaatccaggatggtctgggtcaactgaagacg
ctactagaaacacacatctacaatcagggcatagcggccattgacaagtgtggggactcg
gccctcaatgaccccaagatgtacgtacagacgatcctggatgtccacaggaagtaccac
gcactggtgatgacggccttcagtaacgacgccggattcgtggctgccctcgacaaggcg
tgtggaagattcatcaacaataactcggtcactagaatggctaactcctccagcaaatcc
ccagagctgttggcgcgatattgtgatctgttgctcaaaaagagttccaagaatccagaa
gaagcagaactagaagacacactgaatcaagtgatgattgtgttcaagtacattgaggac
aaggatgtattccagaagttctacagtaaaatgctggccaagcggttggtgcagcacatg
tctgctagtgatgacgcggaggccagcatgatctcaaaactgaaacaagcctgtggcttt
gagtacaccagtaaactacagaggatgttccaggacgtcagcgtcagtaaggaactcaac
gaccagttccgggatcacctgaagaagacttccgaggaacccctggacattgacttcagt
atacaggtgctaagctccgggtcctggccgttccagcaatctgctgattgtactttcact
ttaccccaagagcttgagaggagtttccagaggttcacctgcttctataacaaccgacac
agtggccgtaagctgaactggttgtatcatcattccaagggagaggtggtcactcactgc
ttcaagaacagatacaccctgcaggcatccacatatcagatggctgtattgctgcagttt
aacagtgtcgaccgactgaccgttcaacagatggaagagagtacgcagctcaagtcggaa
accttaatacaagtgttacagattttattaaaagtgaaattattggtttgtgatgatgat
gaaaatgacctccgacctgcgtcttcattagaactcttctttggttataaaaataaaaag
ttacgtgtgaacatcaacgtgcctctgaagacggaagtcaagacagaacaagagacgaca
cacaaacacatagaagaggaccgcaaacttctgattcaggctgctattgtccgcataatg
aagatgaggaaggttttaaagcatcagcagttgttggcagaagtcctgaatcaactctcc
tcccgattcaagcccagagtcccagtgataaagaaatgtatagacattttgatcgagaag
gagtacttggagcgagtggagggacagaaagacacgtacagttacttggcctga
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