Crassostrea virginica (eastern oyster): 111124987
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Entry
111124987 CDS
T09197
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111124987
03036 Chromosome and associated proteins [BR:
cvn03036
]
111124987
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111124987
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111124987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
111124987
NCBI-ProteinID:
XP_022324069
UniProt:
A0A8B8D945
LinkDB
All DBs
Position
3:complement(39064231..39083990)
Genome browser
AA seq
2021 aa
AA seq
DB search
MASRRKPLTTKRADSEEEPDANGVDNSDGELESLPEGTVVVQPEPVDKKGTFRGPEFRSK
KKEKKESTLDISSGALGRVSCTACGEQINTNKSTSVRKHPQLKVLVCKNCYKYHTSGPIS
QDEDGLDEQCRWCSEGGKLFGCDFCHNAFCKTCIIRNLGRSEISNVTEDGKEWKCYVCDD
TLLKPLRAECRKVMDHMETEEKRAKEKTKQLTNGGSKSGSLKESNEAVKAAPETKVESKP
KPKENKQLLKVLSSSNPSSRSSSPSEFQKTILTQPHAGTTINTEKIIIDTKTGNTTKFEM
VYPNASVVRTQYKPVSRPISKPVTSEGAVSMSFTGLLPGNIHSIITNLLSMTNNLQELLK
NIQENVISESNLDKLPFEISLRTLSQQQLQARLTATNMVKNGVNLFLQEMAMKTSAAGVK
ALNLSQQGSQPNLASSLLAGKPLDRNGGAMNIDTPQKFDRPGGTNSPLLTSTPNCKSTEE
DSDIEVLDSTPGKKEAQKSEIISTSQNSTNDDTMVNENELAEKELLKDAAEEVGSEVNDS
EDEKDLSINKDGKGKRKSVTKSVNNSKSVSDKTQEKSASVKENVSSTTNEEEEKLSKKLR
RKSKTGTDSDDRESRAMRRTRSQSQDSEETQSSDKESDKAAGKGSDLDTSKSKSSKKSDA
KRKPKDNEETEESDEKKSSDTNHDKKEEAKSKTKKSSKKEAEKKTPVKDKSKGNDPDEED
VNSNDTEEEDEEEDDTDNSEDEDFVVSKTRRSTRKSGNKATKKKDDKKKKSGDESSEFDS
DLEKDIEKLSKSPVKSSKSRTTRSSVKSEDTSKKSEASDKKKSVKKRDEKGKDNSSEDDA
TEEESDNTELDDPEGEIDMDCSENAKAEKELLKEMEEEISEEEDNADSSDSEVIISPQKK
RAAAKKVKGKLSSDSGSSTEQDAPKKKKKRDELLDAKLSSSDSDILPKGKSKKRKAKSSS
SSEENSSEDEFIALGKKKAKAKGGKKKAGTGKARKRRRIKAASSSSDNEEAVSEDEEDDS
ESGDEDNPDTPKRLKRKKIRKIKSEKKLTSETKSAVKAEEERRKRIAEKQKIFNGIVQEV
DESSPTKCPLTKQLVLDFDEETKDPIIEVDKGLVVKLKPHQVEAVQFVWDCTFESLKRSK
TEEGSGCILAHCMGLGKTLSLITFIHTVLSNKKKTKVNTCMVVAPLNTILNWQYEFEMWQ
EFTKKEIDVYELSSVKQNADRAAVLKNWHNNGGVVILGYDMFRNLTQGSHCRSKNQKKIF
TETLVEPGPDLVVCDEGHILKNDQSAISKAMNKIKSYRRVVLTGTPLQNNLMEYHCMVNF
VKPNLLGTSKEFRNRFVNPITNGQCADSTAHDVKIMKRRAHILHEKLNGCVQRKDYSSLT
KYLPPKHEYVIAVRLSPPQMTLYEKYLHLAGFGTDAAPRANRGARMFADYQALMRIWTHP
WVMKMDEIRQADKRAIDDESDFLDDSMGSDSDSDKSGNSSSSSSTPSEVSVKSNLSNGGR
KTRNQKKKNGGSDESDLDDSDAPKKNEVVKKWTTRRRLGQMSDTEEDPGPQPVSMEWWAE
FVKPEDEEKIELSGKLVLLFEILRMSEEIGDKVLVFSQSLLSLDLIERFLEKVDKKHQED
LDKKDEEKKDNEEKKDKKEGVSEESESFGKHWTLGEDYFRMDGSHSAQARKEMASKFNDP
ENYQCRLFLISTKAGGLGINLVAANRVIIFDASWNPSHDVQSIFRVYRFGQEKPVYVYRF
LAQGTMEEKIYERQVTKQSLSQRVVDEHQIDRHFNANELAELYTFRPDRLDDPNRVEKTP
MLPKDFMLAELMKSRKEWFVNYHEHDSLLENKIGEELDEEERKAAWEEYENERKGVIQMR
QNFMANMPNMGFNNMLHQMQQQQAHMGMPPYMYNQGFNVQGFTQQNLLQLVQDMKQRYPH
LPQEQLTQQVQTVIRQMISRQIAAQQEAQKRQMEQKELHHQRELQRIQDQIRQQQMQLMQ
AAMSGANPGTSGQQGGASHMNSLLNPANTEMLQRQSRGAKK
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagaaggaaaccattgactaccaagagagctgattcagaagaagaacctgat
gcaaatggtgtagacaattccgatggtgaactagagtctttgcctgaaggtactgttgtt
gtgcagcctgaacctgtggataagaaaggtacattcagaggaccagagtttagatcaaag
aaaaaagaaaaaaaggaatctactttagatatcagctcaggggctcttggtcgagtgtcc
tgcacagcatgtggagagcagatcaatacaaataaatctacgagtgtccgcaaacaccct
cagctaaaggtcttggtttgtaagaattgttacaaataccacaccagtggaccaatttca
caggatgaagatggtctagatgaacagtgtagatggtgcagtgaaggaggaaagctattt
ggctgtgatttctgtcacaatgctttctgcaagacatgtataataagaaatctaggaaga
tctgaaatcagcaatgttacagaggatggaaaagaatggaagtgttatgtatgtgacgac
actcttcttaaacctctgcgggcagagtgtaggaaagtcatggatcacatggagactgag
gaaaaaagggcaaaggagaaaaccaaacagttaaccaatggtggctcaaagtctggaagc
ctcaaggagtccaatgaagctgtaaaagcagcccctgaaaccaaggtggaaagcaaacca
aagccaaaagaaaataaacagttacttaaggtgctgtccagcagcaatccatcctctcga
tcttcttcgcccagtgaatttcagaaaaccattctgacgcagccacatgctggcactacc
attaacacagagaaaataatcattgataccaagacaggcaacacgacaaagtttgaaatg
gtttatccaaatgctagtgtggtacggactcagtataagccggtgtcaaggcctatttcc
aagcccgtgacctcagaaggggcggtgtcaatgtcattcactggtctcttgccaggaaat
attcatagtatcataacaaacttgttatctatgacgaacaatctgcaagagcttttgaaa
aatattcaagaaaatgttatatcagaatctaatctagataaactaccttttgagatttct
cttaggacattgagtcaacaacaacttcaagccagactaacagccactaacatggtgaaa
aatggtgtgaatttgtttttacaagaaatggcaatgaaaacttcagcagctggtgtgaaa
gcattaaatcttagtcaacaaggatctcagcctaatttggcatccagcttattggctgga
aagcctttagacagaaatggtggtgctatgaacatagatactccacagaagtttgatagg
ccaggtggtaccaattctcctctcttgacgagcactcccaattgtaaatctacagaggaa
gattctgatattgaagtgctggactcaactcctgggaagaaagaagcacaaaaatctgag
attatctccacatcgcagaacagtactaatgatgatacaatggtgaacgagaatgaattg
gctgaaaaagaacttttaaaagatgcagctgaggaagtgggaagtgaggtcaatgattcc
gaagatgaaaaagacctatccattaacaaagatgggaaaggaaagcgaaagtcagtcaca
aaatctgtgaacaattcaaaatctgtatctgataaaacccaagaaaagtctgcaagtgtc
aaagaaaatgtgtcctctaccactaatgaggaagaggagaaattgagcaagaaacttaga
aggaagtccaaaactggtacagacagcgacgaccgagagtccagggcaatgagaagaaca
agaagccagtcacaagactccgaggagacccagtccagtgataaagaaagtgacaaagcc
gcaggaaaaggaagtgatctagatacttcgaaaagtaagagtagcaaaaagtcggatgct
aagaggaaacccaaagataacgaggaaaccgaggaaagtgatgagaaaaaatcaagtgat
actaatcatgataaaaaggaggaagctaaatccaaaactaaaaaatcctccaagaaagaa
gctgaaaaaaagacccctgtaaaggataaatctaagggcaacgatccagatgaggaagac
gttaacagcaatgatacggaagaggaggatgaggaggaggatgatacagataacagtgaa
gatgaagattttgtggtctcaaaaacccgccgatccaccagaaaatcaggtaacaaagcc
acaaagaagaaggatgataagaaaaagaagagtggagacgagtcttctgaatttgattct
gatttggaaaaagatatcgaaaaattgtccaagagtcctgttaagtcctcaaaatcacgt
acaactagaagcagtgtcaaatccgaggacacttctaaaaaatctgaggcatctgataag
aaaaaatctgtgaagaagagggatgaaaaaggaaaagacaactcttcagaggacgatgca
acagaagaagaatctgataacaccgaattagatgatccagagggagaaattgacatggat
tgctcagaaaatgccaaagctgaaaaagagttattgaaagaaatggaggaagaaatcagt
gaggaggaagacaatgcagacagcagtgattcagaggttataatttctccacaaaagaag
agagcagctgccaaaaaagtgaaaggaaagttgtcctctgactctggaagttccacagag
caagatgcaccaaaaaagaagaagaaacgagatgagctgctggatgccaagttatcaagc
agtgactcggacattttacccaaaggcaaaagcaagaagagaaaagcgaagtcttctagc
agtagtgaggagaatagtagcgaggatgagttcattgcattagggaagaagaaagcaaag
gcaaagggaggtaagaagaaggcaggaacagggaaagccaggaagagaagaagaatcaaa
gccgccagtagttcctctgacaatgaagaagctgtcagcgaagatgaggaggatgatagt
gaatccggagatgaagataatcctgatacaccaaaaagactcaaaaggaagaagatcagg
aagatcaagtcggagaagaagttgacttctgaaaccaagtcagctgttaaagcggaagag
gaaaggagaaaaagaattgcagaaaaacagaaaattttcaatggcattgtacaagaagtg
gatgagtcatcgccaacaaagtgtcccctaacaaaacagctggtcctagactttgatgag
gagacaaaagatccaattattgaagtggataaaggattggttgtcaagctaaaaccccat
caggttgaagctgtgcagtttgtctgggattgtacctttgagtcactgaaaaggtccaaa
acagaagaaggctctggctgtattttagctcattgtatggggctagggaaaacgttgtca
ctgataacatttatccacacagtgttgtccaacaagaagaagaccaaagtgaatacttgt
atggtggtggcccctttaaacactatcctcaactggcagtacgaattcgaaatgtggcaa
gaatttaccaaaaaagaaattgatgtgtacgagttgtcttctgtaaagcagaatgctgat
agagcagcagtgctgaagaactggcacaataatggaggggtcgtgattttgggatatgac
atgttcagaaatcttactcagggcagtcactgtagaagcaaaaaccagaaaaagatcttc
accgaaactcttgtagagccaggaccagacttggtggtatgtgatgaaggtcatattctg
aagaatgaccagtctgccatttccaaggctatgaataaaatcaaatcctacagaagggtt
gtgctcactggcaccccattacagaataatctcatggaatatcactgcatggtcaatttt
gtaaagcccaatttgttaggaacgagcaaagagtttcgaaatcgatttgtcaatccaatt
accaatggacagtgtgcagattccacagctcatgatgtgaaaatcatgaagagacgagcc
catatacttcatgagaaactcaatggatgtgtacagagaaaagattacagctcactcacc
aagtacctgcctcctaaacatgagtatgtcattgccgtccgtctgtcacccccacaaatg
acactgtatgaaaagtacctacatttagcgggctttggaacagatgcagcacccagggcc
aatcgaggagccagaatgtttgcagattatcaagctttgatgcgaatttggacacatcct
tgggtgatgaagatggatgaaattcgacaagctgataagagagcaattgatgatgaatcg
gattttctggacgactctatgggctcggattctgatagtgacaagtcagggaatagctcc
agctcctcctccactccttctgaagtttctgtcaagtccaacttatccaatggcggcaga
aagacacgcaatcagaagaaaaagaacgggggttcagatgaaagtgacttggatgacagt
gatgctccgaagaagaatgaagtagtgaagaagtggaccactaggagacgactaggacag
atgagtgacacagaggaagacccaggaccccagccagtttcaatggagtggtgggcagag
tttgtgaaacctgaggatgaggagaaaatagaactgagtggaaaactggtcctcttgttt
gagattctaaggatgagtgaagaaataggagacaaagtgttggttttcagtcaaagttta
ctgtcactagatttgattgaaagatttctggaaaaggtagataaaaagcatcaagaagat
ctggacaaaaaggatgaagagaagaaggacaatgaagagaagaaggataaaaaagagggt
gtcagcgaagagagtgaatcctttgggaaacactggactcttggagaagattacttcaga
atggatggatctcatagcgctcaggctagaaaagaaatggcctctaaattcaatgaccca
gaaaattaccagtgtcgacttttcctgatttctacaaaggcagggggacttggaattaat
ttggtagctgctaatagagtgattatctttgatgcgtcttggaacccttcacatgatgtg
cagtccatcttcagggtctaccgattcggacaagaaaaaccagtttacgtctacagattt
cttgcccagggaacaatggaagaaaagatatatgagcgacaggtaacgaagcaatccttg
tcccaaagagtggtagatgagcatcagatagacagacattttaatgccaatgagcttgca
gaactttacacgtttagaccggatagactagatgacccgaatagagtggaaaagacgccc
atgttgccaaaggattttatgcttgccgagctgatgaaatcgcggaaagagtggtttgtg
aattaccacgaacatgattccctactggagaataagataggagaagaattggatgaggaa
gagagaaaagctgcttgggaggagtatgaaaatgaaaggaaaggtgtcattcagatgagg
caaaactttatggcaaacatgcccaacatgggtttcaacaatatgcttcaccaaatgcag
cagcagcaagcacatatgggaatgccaccatacatgtataatcagggatttaatgtccag
ggtttcacgcaacagaaccttttacaactggttcaggatatgaaacaaaggtatccacac
ttgccccaggagcagcttactcaacaggtacaaacagtcattcggcagatgatttcacgg
caaatcgcagctcaacaggaagcacagaaaagacagatggaacagaaagagctccatcat
cagagagagctacagagaatccaggatcagattcggcagcagcagatgcagctgatgcag
gcggccatgtcgggggccaacccaggaacctcgggccagcaggggggtgccagtcatatg
aattccttgttaaacccggctaacactgagatgttacagcgacagtcaagaggggccaaa
aaatga
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