Crassostrea virginica (eastern oyster): 111125022
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Entry
111125022 CDS
T09197
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111125022
03036 Chromosome and associated proteins [BR:
cvn03036
]
111125022
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111125022
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111125022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
111125022
NCBI-ProteinID:
XP_022324143
UniProt:
A0A8B8D7P3
LinkDB
All DBs
Position
3:complement(38428488..38447578)
Genome browser
AA seq
2016 aa
AA seq
DB search
MASRRKPLTTKRADSEEEPDANGIDNSDGELESLPEGTVVVQPEPVDKKGTFRGPEFRSK
KKEKRESTLDISSGALGRVSCTACGEQINTNKSTSVRKHPQLKVLVCKNCYKYHTSGPIS
QDEDGLDEQCRWCSEGGKLFGCDFCHNAFCKTCIIRNLGRSEISNVTEDGKEWKCYVCDD
TLLKPLRAECRKVMDHMETEEKRAKEKTKQLTNGGSKSGSLKESNEAVKSAPETKAESKP
KPKENKQLLKVLSSSNPSSRSSSPSEFQKTILTQPHAGTTINTEKIIIDTKTGNTTKFEM
VYPNASVVRTQYKPVSRPISKPVTSEGAVSMSFTGLLPGNIHSIITNLLSMTNNLQELLK
NIQENVISESNLDKLPFEISLRTLSQQQLQARLTATNMVKNGVNLFLQEMAMKTSAAGVK
ALNLSQQGSQPNLASSLLAGKPLDRNGGAMNIDTPQKFDRPGGTNSPLLTSTPNCKSTEE
DSDIEVLDSTPGKKEAQKSEIISTSQNSTNDDTMVNENELAEKELLKDAAEEVGSEVNDS
EDEKDLSINKDGKGKRKSVTKSVNDSKSVSDKTQEKSASVKENVSSTTNEEEEKLSKKLR
RKSKTGTDSDDRESRAMRRTRSQSQDSEETQSSDKESDKAAGKGSDLDTSKSKSSKKSDA
KRKPKDNEETEESDEKKSSDTNDDKKEKAKSKTKKSSKKDAEKKTPVKDKSKGNDPDEED
VNSNDTEEEDEEVEDDTDNSEDEDFVVSKTRRSTRKSGNKATKKKDDKKKKSGDESSEFD
SDLEKDIEKLSKSPVKSSKSRTTRSSVKSEDTSKKSEASGNRDEKGKDNSSEDDATEEES
DNTELDDPEGEIDMDCSENAKAEKELLKEMEEEISEEEDNADSSDSEVIISPQKKRAAAK
KVKEKLSSDSGSSTEQDAPKKKKKRDELLDAKLSSSDSDILPKGKSKKRKAKSSSSSEEN
SSEDEFIALGKKKAKAKGGKKKAGTGKARKRRRIKAASSSSDNEEAVSEDEEDDSESGDE
DNPDTPKRLKRKKIRKIKSEKKLTSETKSAVKAEEERRKRIAEKQKIFNGIVQEVDESSP
TKCPLTKQLVLDFDEETKDPIIEVDKGLVVKLKPHQVEAVQFVWDCTFESLKRSKTEEGS
GCILAHCMGLGKTLSLITFIHTVLSNKKKTKVNTCMVVAPLNTILNWQYEFEMWQEFTKK
EIDVYELSSVKQNADRAAVLKNWHNNGGVVILGYDMFRNLTQGSHCRSKNQKKIFTETLV
EPGPDLVVCDEGHILKNDQSAISKAMNKIKSYRRVVLTGTPLQNNLMEYHCMVNFVKPNL
LGTSKEFRNRFVNPITNGQCADSTAHDVKIMKRRAHILHEKLNGCVQRKDYSSLTKYLPP
KHEYVIAVRLSPPQMTLYEKYLHLAGFGTDAAPRANRGARMFADYQALMRIWTHPWVMKM
DEIRQADKRAIDDESDFLDDSMGSDSDSDKSGNSSSSSSTPSEVSVKSNLSNGGRKTRNR
KKKNGGSDESDLDDSDAPKKNEVVKKWTTRRRLGQMSDTEEDPGPQPVSMEWWAEFVKPE
DEEKIELSGKLVLLFEILRMSEEIGDKVLVFSQSLLSLDLIERFLEKVDKKHQEDLDKKD
EEKKDSEEKKDKKEGVSEESESFGKHWTLGEDYFRMDGSHSAQARKEMASKFNDPENYQC
RLFLISTKAGGLGINLVAANRVIIFDASWNPSHDVQSIFRVYRFGQEKPVYVYRFLAQGT
MEEKIYERQVTKQSLSQRVVDEHQIDRHFNANELAELYTFRPDRLDDPNRVEKTPMLPKD
FMLAELMKSRKEWFVNYHEHDSLLENKIGEELDEEERKAAWEEYENERKGVIQMRQNFMA
NMPNMGFNNMLHQMQQQQAHMGMPPYMYNQGFNVQGFTQQNLLQLVQDMKQRYPHLPQEQ
LTQQVQTVIRQMISRQIAAQQEAQKRQMEQKELHHQRELQRIQDQIRQQQMQLMQAAMSG
ANPGTSGQQGGASHMNSLLNPANTEMLQRQSRGAKK
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagaaggaaaccattgactaccaagagagctgattcagaagaagaacctgat
gcaaatggtatagacaattccgatggtgaactagagtctttgcctgaaggtactgttgtt
gtgcagcctgaacctgtggataagaagggtacattcagaggaccagagtttagatcaaag
aaaaaagaaaaaagggaatctactttagatatcagctcgggggctcttggtcgagtgtcc
tgcacagcatgtggagagcagatcaatacaaataaatctacgagtgtccgcaaacaccct
cagctaaaggtcttggtttgtaagaattgttacaaataccacaccagtggaccaatttca
caggatgaagatggtctagatgaacagtgtagatggtgcagtgaaggaggaaagctattt
ggctgtgatttctgtcacaatgctttctgcaagacatgtataataagaaatctaggaaga
tctgaaatcagcaatgttacagaggatggaaaagaatggaagtgttatgtatgtgacgac
actcttcttaaacctctgcgggcagagtgtaggaaagtcatggatcacatggagacggag
gaaaaaagggcaaaggagaaaaccaaacagttaaccaatggtggctcaaagtctggaagc
ctcaaggagtccaatgaagctgtaaaatcagcccctgaaaccaaggcggaaagcaaaccg
aagccaaaagaaaataaacagttactgaaggtgctgtccagcagcaatccatcctctcga
tcttcttcgcccagtgaatttcagaaaaccattctgacgcagccacatgctggcactacc
attaacacagagaaaataatcattgataccaagacaggcaacacgacaaagtttgaaatg
gtttatccaaatgctagtgtggtacggactcagtataagccggtgtcaaggcctatttcc
aagcctgtgacctcagaaggggcggtgtcaatgtcattcactggtctcttgccaggaaat
attcatagtatcataacaaacttgttatctatgacgaacaatctgcaagagcttttgaaa
aatattcaagaaaatgttatatcagaatctaatctagataaactaccttttgagatttct
cttaggacattgagtcaacaacaacttcaagccagactaacagccactaacatggtgaaa
aatggtgtgaatttgtttttacaagaaatggcaatgaaaacttcagcagctggtgtgaaa
gcattaaatcttagtcaacaaggatctcagcctaatttggcatccagcttattggctgga
aagcctttagacagaaatggtggtgctatgaacatagatactccacagaagtttgatagg
ccaggtggtaccaattctcctctcttgacgagcactcccaattgtaaatctacagaggaa
gattctgatattgaagtgctggactcaactcctgggaagaaagaagcacaaaaatctgag
attatctccacatcgcagaacagtactaatgatgatacaatggtgaacgagaatgaattg
gctgaaaaagaacttttaaaagatgcagctgaggaagtgggaagtgaggtcaatgattcc
gaagatgaaaaagacctatccattaacaaagatgggaaaggaaagcgaaagtcagtcaca
aaatctgtgaatgattcaaaatctgtatctgataaaacccaagaaaagtctgcaagtgtc
aaagaaaatgtgtcctctaccactaatgaggaagaggagaaattgagcaagaaacttaga
aggaagtccaaaactggtacagacagcgacgaccgagagtccagggcaatgagaagaaca
agaagccagtcacaagactccgaggagacccagtccagtgataaagaaagtgacaaagcc
gcaggaaaaggaagtgatctagatacttcgaaaagtaagagtagcaaaaagtcggatgct
aagaggaaacccaaagataacgaggaaaccgaggaaagtgatgagaaaaaatcaagtgat
accaatgatgataaaaaggagaaagctaaatccaaaactaaaaaatcatccaagaaagat
gctgaaaaaaagacccctgtaaaggataaatctaaaggcaacgatccagatgaggaagac
gttaacagcaatgatacggaagaggaggatgaggaggtggaggatgatacagataacagt
gaagatgaagattttgtggtctcaaaaacccgccgatccaccagaaaatcaggcaacaaa
gccacaaagaagaaggatgataagaaaaagaagagtggagacgagtcttctgaatttgat
tctgatttggaaaaagatatcgaaaaattgtccaagagtcctgttaagtcctcaaaatca
cgtacaactagaagcagtgtcaaatccgaggacacttctaaaaaatctgaggcatctggt
aatagggatgaaaaaggaaaagacaactcttcagaggacgatgcaacagaagaagaatct
gataacaccgaattagatgatccagagggagaaattgacatggattgctcagaaaatgcc
aaagctgaaaaagagttattgaaagaaatggaggaagaaatcagtgaggaggaagacaat
gcagacagcagtgattcagaggttataatttctccacaaaagaagagagcagctgctaaa
aaagtgaaagaaaagttgtcctctgactctggaagttccacagagcaagatgcgccaaaa
aagaagaagaaacgagatgagctgctggatgccaagttatcaagcagtgactcggacatt
ttacccaaaggcaaaagcaagaagagaaaagcgaagtcttctagcagtagtgaggagaat
agtagcgaggatgagttcattgcattagggaagaagaaagcaaaggcaaagggaggtaag
aagaaggcaggaacagggaaagccaggaagagaagaagaatcaaagccgccagtagttcc
tccgacaatgaagaagctgtcagcgaagatgaggaggatgatagtgaatccggagatgaa
gataatcctgatacaccaaaaagactcaaaaggaagaagatcaggaagatcaagtcggag
aagaagttgacttctgaaaccaagtcagctgttaaagcggaagaggaaaggagaaaaaga
attgcagaaaaacagaaaattttcaatggcattgtacaagaagtggatgagtcatcgcca
acaaagtgtcccctaacaaaacagctggtcctagactttgatgaggagacaaaagatcca
attattgaagtggataaaggattggttgtcaagctaaaaccccatcaggttgaagctgtg
cagtttgtctgggattgtacctttgagtcactgaaaaggtccaaaacagaagaaggctct
ggctgtattttagctcattgtatggggctagggaaaacgttgtcactgataacatttatc
cacacagtgttgtccaacaagaagaagaccaaagtgaatacttgtatggtggtggcccct
ttaaacactatcctcaactggcagtacgaattcgaaatgtggcaagaatttaccaaaaaa
gaaattgatgtgtacgagttgtcttctgtaaagcagaatgctgatagagcagcagtgctg
aagaactggcacaataatggaggggtcgtgattttgggatatgacatgttcagaaatctt
actcagggcagtcactgtagaagcaaaaaccagaaaaagatcttcaccgaaactcttgta
gagccaggaccagacttggtggtatgtgatgaaggtcatattctgaagaatgaccagtct
gccatttccaaggctatgaataaaatcaaatcctacagaagggttgtgctcactggcacc
ccattacagaataatctcatggaatatcactgcatggtcaattttgtaaagcccaatttg
ttaggaacgagcaaagagtttcgaaatcgatttgtcaatccaattaccaatggacagtgt
gcagattccacagctcatgatgtgaaaatcatgaagagacgagcccatatacttcatgag
aaactcaatggatgtgtacagagaaaagattacagctcactcaccaagtacctgcctcct
aaacatgagtatgtcattgccgtccgtctgtcacccccacaaatgacactgtatgaaaag
tacctacatttagcgggctttggaacagatgcagcacccagggccaatcgaggagccaga
atgtttgcagattatcaagctttgatgcgaatttggacacatccttgggtgatgaagatg
gatgaaattcgacaagctgataagagagcaattgatgatgaatcggattttctggacgac
tctatgggctcggattctgatagtgacaagtcagggaatagctccagctcctcctccact
ccttctgaagtttctgtcaagtccaacttatccaatggcggcagaaagacacgcaatcgg
aagaaaaagaacgggggttcagatgaaagtgacttggatgacagtgatgctccgaagaag
aatgaagtagtgaagaagtggaccactaggagacgactaggacagatgagtgacacagag
gaagacccaggaccccagccagtttcaatggagtggtgggcagagtttgtgaaacctgag
gatgaggagaaaatagaactgagtggaaaactggtcctcttgtttgagattctaaggatg
agtgaagaaataggagacaaagtgttggttttcagtcaaagtttactgtcactagatttg
attgaaagatttctggaaaaggtagataaaaagcatcaagaagatctggacaaaaaggat
gaagagaagaaggacagtgaagagaagaaggataaaaaagagggtgtcagcgaagagagt
gaatcctttgggaaacactggactcttggagaagattacttcagaatggatggatctcat
agcgctcaggctagaaaagaaatggcctctaaattcaatgacccagaaaattaccagtgt
agacttttcctgatttctacaaaggcagggggacttggaattaatttggtagctgctaac
agagtgattatctttgatgcgtcttggaacccttcacatgatgtgcagtccatcttcagg
gtctacaggtttggacaagaaaaaccagtttacgtctacagatttcttgcccagggaaca
atggaagaaaagatatatgagcgacaggtaacgaagcaatccttgtcccaaagagtggtc
gatgagcatcagatagacagacattttaatgccaatgagcttgcagaactttacacgttt
agaccggatagactagatgacccgaatagagtggaaaagacgcccatgttgccaaaggat
tttatgcttgccgagctgatgaaatcgcggaaagagtggtttgtgaattaccacgaacat
gattccctactggagaataagataggagaagaattggatgaggaagagagaaaagctgct
tgggaggagtatgaaaatgaaaggaaaggtgtcattcagatgaggcaaaactttatggca
aacatgcccaacatgggtttcaacaatatgcttcaccaaatgcagcagcagcaagcacat
atgggaatgccaccatacatgtataatcagggatttaatgtccagggtttcacgcaacag
aaccttttacaactggttcaggatatgaaacaaaggtatccacacttgccccaggagcag
cttactcaacaggtacaaacagtcattcggcagatgatttcacggcaaatcgcagctcaa
caggaagcacagaaaagacagatggaacagaaagagctccatcatcagagagagctacag
agaatccaggatcagattcggcagcagcagatgcagctgatgcaggcggccatgtcgggg
gccaacccaggaacctcgggccagcaggggggcgccagtcatatgaattccttgttaaac
ccggctaacactgagatgttacaacgacagtcaagaggggccaaaaaatga
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