Crassostrea virginica (eastern oyster): 111125104
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Entry
111125104 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111125104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111125104
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
GTPases
111125104
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
cobW
AIG1
Dynamin_N
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
111125104
NCBI-ProteinID:
XP_022324284
UniProt:
A0A8B8D9R5
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Position
3:complement(9999742..10001743)
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AA seq
626 aa
AA seq
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MGRKKTSGNLGRSIIKDRFGKRNIVKSEDSFIHTSELQDGYDWGXLNLQSVTEQSNLDDF
LATAELAGTEFAAEKLNIQFVDPQRHTGPKPDELEQIKLLHKEHETLLRIPRRPHWDEST
TAEQLDHMEKESFLQWRRGLSSLQEIEGIVMTPYEKNLEFWRQLWRVIERSDIIVQVVDA
RNPLLYQCYDLEQYVKEVDTKKVNVLLVNKADFLSDNQRQMWKEYFDKMGTCVAFWSALE
ETERYEKKEREEREMEENMLEPESEEEEEENKDDEEAMSDICSEAQAKEDVSSEPMFPAA
RETSATEKTDTENDNCVTQAEASGGIQLNNSVKVLDAEELLNYFKSVHQGARVTEGQFTV
GMVGYPNVGKSSTINAILKTKKVPVSSTPGRTKHFQTLYVERDLMLCDCPGLVFPSFVST
KAELIVNGILPIDQMRDHWPPVNLVCNYIPKDTLEALYGINLPPPPEGEDPERPPTAEEL
LTTYGNMRGYMSVTGNPDCPRTARYVLKDFVNGRLLYCHPPPDADPEEFHSCGLVPKDLR
DKQSALLKKKPKEAPVSQSKLDKDFFKKLNVGMHSKGSVSLHQTGGVATGGGSPSGSMMS
VAGKPWKKHHNKGKREKLRRVFKDGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaagaaaactagtgggaatcttgggcgttccatcatcaaagatcgctttggt
aaacgtaacattgtaaagagtgaggattcatttattcatactagtgaactacaagatggt
tatgattggggcngactgaacctccagtctgtaactgagcaaagtaacttggacgatttt
ctggccactgcagaactcgctggcacagaattcgcggctgagaaacttaacattcagttc
gtagatccccaaagacatacgggacccaagccagatgaactggagcagatcaaactgtta
cacaaagagcatgaaaccttgctcagaattcccaggagacctcattgggatgagagtacc
actgcggaacagttggatcacatggagaaagagagcttcctgcagtggagaagagggctg
tcgtcactacaagagatagaaggcattgtcatgacgccctatgaaaagaatctggagttc
tggcgacagttatggcgagtgatcgagcggagtgacattattgtgcaggtggtggatgct
cgaaaccctttattataccagtgttatgatcttgaacagtatgtcaaggaagtggacact
aagaaagtcaatgttttacttgttaataaggctgattttctgagtgataatcagagacag
atgtggaaggagtattttgacaagatggggacgtgtgtggcattctggtctgctttggag
gaaaccgagagatacgaaaagaaagaaagagaagagagagagatggaagaaaatatgttg
gaaccagagagtgaggaagaggaggaggaaaataaagatgatgaagaagcaatgtcagac
atatgcagtgaagcccaggcaaaagaggatgtctcatccgagccaatgtttcccgcagct
agagagaccagtgctacagagaaaactgacactgaaaatgacaattgtgtaactcaggct
gaagcatcaggtggtatacagctaaataacagtgtgaaagtgttagatgcagaggagttg
ctgaactatttcaaaagtgttcatcagggagcaagggtcacagaaggtcagttcacagtg
gggatggtcggatatccaaatgtcgggaagagctctacgataaatgcgatcctcaagacc
aagaaagtccctgtgtcgtcgacgccaggaagaaccaaacattttcagactctttatgtg
gagcgtgatttgatgttgtgcgattgtccgggccttgttttcccttcatttgtgtcaaca
aaagcagagctaattgtaaatggaatcttacctatagaccagatgagggaccactggcct
ccagtgaatctggtgtgtaactacatccccaaggacactctggaggccctgtatgggatc
aaccttccaccaccccccgagggtgaggacccggagcgtccccccactgcggaggaactc
ctgacaacgtacggcaacatgagggggtacatgtctgtcactggaaacccagactgcccc
agaactgcacgctacgtcctgaaggactttgtgaacggacggcttctctactgccatcct
ccaccagatgcagaccctgaggagtttcattcctgtgggttggtacccaaagacctgagg
gacaaacaaagtgcactgttgaaaaagaaacccaaggaggctcctgtctcccaaagcaag
ctggacaaggactttttcaagaagttgaatgttggcatgcattccaaaggctcggtcagc
ctgcaccagacgggaggggtggccacgggagggggcagccccagcggtagcatgatgtcg
gtggcgggcaaaccgtggaagaagcaccacaacaaaggcaagcgagaaaaactccgcagg
gtgttcaaggacggagagtga
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