Crassostrea virginica (eastern oyster): 111125118
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Entry
111125118 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 6-like
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111125118
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111125118
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
DUF1699
LRR_EndoS
LRR_NXF1-5
T4_y05I_N
EF-1_beta_acid
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
111125118
NCBI-ProteinID:
XP_022324307
UniProt:
A0A8B8D863
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Position
3:19087899..19107367
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AA seq
485 aa
AA seq
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MKRCSKGIFGIKKDPKNQILFSFSARDGEEWPSDGSDSDEDEDTKPIRKKRQKKSYENQE
TEPSTKSNDVVPKKDVVCASQVPEEIWEHIFQIVIKESGPLPFLCRAAKVCKLWQGLASL
ASLWRRVDLSFEWICPKRYTLKWLVHERLSQCREINLTKWALTDDQLKMVLQNCSELKCL
NLSYCKKLSQEGFAALVDNIAHLEKLDVSFTAININNIIDIVMKHCKSIKELHIGGNSYL
NIPDLANRIYENCSGLEVLDVSNCRFSGDDGYDHVNDVQKFQTHCPLLRVLRLGNSKFRL
KKTNGSLPGFEKLQELNLGWNSDASGGINKTFVYDILIKSSELKLLDLGGCWNMQDITPL
LGLPFTDLEQLYLSRSPIRFNGLLGPLLQKCKHTLRILHIDKNIFLGDDLDTALQELFPL
NSTSVLEVVNAAQTNIRESSVERLLQNCRNLHYINLSCCDNLPRGIRREYKDKEITELKS
FLGIK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatgttcaaaaggaatttttggaataaaaaaggatccaaagaatcaaattctt
ttttccttctctgctagagacggtgaggaatggccctctgatggttcagattcagatgag
gatgaagacaccaaaccaattcggaaaaagaggcaaaagaagtcatatgaaaaccaagag
acagaaccttcaacaaaatcaaatgatgtagtaccgaaaaaggacgtcgtttgtgctagc
caagttccagaagagatttgggaacatatttttcagattgtcatcaaagaatctggccca
cttccatttttatgcagggctgcaaaggtatgcaaattgtggcaaggcttggcaagtctt
gcatctctctggagaagagtagatttgtcttttgaatggatttgccccaaacggtatacc
ctgaagtggttggttcacgaaaggcttagtcagtgcagggagattaatctgacaaagtgg
gccctgaccgatgatcaactgaagatggttctgcaaaactgttcagaattgaaatgcctg
aacttgtcatactgtaaaaaactttctcaagaaggatttgcagccttggtggacaatatt
gcacatttggagaaattggatgtctctttcacagcgataaatattaataacatcatagac
atcgtcatgaagcattgcaagagtattaaggaactacacatcggtgggaactcttacctg
aacatcccagatctggcaaacaggatatatgagaattgttccggtctggaagtgttggat
gtctccaactgtcgtttttctggggatgacgggtacgatcacgtgaatgatgtgcaaaag
tttcagacacattgtcctttgttaagagttcttcgtctaggaaattctaaattcaggttg
aagaaaacaaatggttctctgcctggatttgaaaagcttcaggaactgaatttaggatgg
aattccgacgcgagtggcggtattaataaaacatttgtatatgacatactaatcaaatca
tcagagttgaaacttttggatcttggaggctgttggaatatgcaggacataactcccctt
ctgggtcttccctttacagaccttgaacaactttacctgtctaggtcaccaatacgtttt
aatggtctacttgggcctctcttgcaaaagtgcaagcacaccctgagaattctccatatt
gataaaaacatcttccttggagatgacttagacacagcacttcaagagttgtttccctta
aatagcaccagtgtcctggaagttgtaaatgctgcacagactaacatcagggagtcgagt
gttgagagacttcttcagaattgtagaaatctgcattacatcaatctgtcatgttgtgat
aaccttccaagaggaatcagaagagaatacaaagacaaggaaattacagaattaaagtca
tttttgggaatcaaatga
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