Crassostrea virginica (eastern oyster): 111125123
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Entry
111125123 CDS
T09197
Name
(RefSeq) retinoic acid receptor alpha-A-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111125123
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111125123
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111125123
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111125123
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111125123
NCBI-ProteinID:
XP_022324317
UniProt:
A0A8B8D9K7
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Position
3:54320579..54345989
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AA seq
457 aa
AA seq
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MNPGMGHDPMSSESSHMQLLNHGAIDFLEAPMNAEQPYGMDHHAPYMAQGAYDPYGYSQK
SNFMLHQGIKSQVFDPQGMYDMQSPTTMSDISMSPSPPPPPRVYKPCVVCSDKSSGYHYG
VSSCEGCKGFFRRSVQKNMQYTCHKDKNCPINKVTRNRCQYCRLQKCYATGMSKEAVRND
RNKKKKPKMENPSSNIEEVTEDEQGVLQEILEAHRVTFPQIEEAVLSPMSCHDTRSDIEN
DEATKENSQNQKKEKSMLWDKVTELSSKGIIKIVEFAKKMPGFTSLSTSDQITLLKAACL
EIMILRLCSRYDLDKDVMMFNGGLSLDREQLQRGGFGSLTDTIFRFASSLKVLNIDEMEY
AVLSAICLISGDRSGLEESERVEQMQEPILEALKHYVRSRRKDQPNVFAKILYKLTDLRS
ISVKGAERVLHLRLEMPDELPPLIVEMLDRQENVCIP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagggatggggcatgacccaatgtcatcagaatccagccacatgcagctcttg
aatcatggagccattgactttttggaagcacctatgaatgcagagcagccctatggaatg
gaccaccatgccccctacatggcacagggagcctatgacccatatggctatagccagaag
agtaacttcatgctgcaccaaggcattaaaagtcaagtatttgacccacagggaatgtat
gacatgcagagccctaccacaatgtcggacataagcatgtccccctcccctccccctcca
cccagagtgtataaaccgtgtgtggtgtgcagcgacaaatcctcagggtatcattatggt
gttagctcctgtgaaggctgcaagggattctttagaagaagtgttcaaaaaaacatgcag
tacacttgccacaaagacaagaactgtcctataaacaaagtcacacggaaccgttgtcag
tactgtcgactacagaaatgttatgccaccggcatgtccaaagaagctgttaggaatgac
aggaacaaaaagaaaaagccaaaaatggagaacccctcctctaacattgaggaggtgact
gaggatgagcaaggtgtgttacaggagatcctggaggctcaccgagtcaccttcccccag
atcgaggaagcagtcttatctcccatgtcatgtcatgacacacgtagtgacatagaaaat
gacgaggcaacaaaagaaaactcacaaaatcaaaaaaaagaaaaatcaatgttgtgggac
aaagtaactgaactttcatcgaaaggaatcataaaaattgtggaatttgccaagaaaatg
cccggatttacttccctttctacctcagatcaaattaccctcctaaaggcagcttgttta
gaaattatgattttacgattgtgttcacgctatgacttggacaaggatgtaatgatgttc
aatgggggacttagcttggaccgtgaacagcttcagagagggggctttggctcattgaca
gacactatttttcgttttgcctcctctctcaaagtgttgaacattgatgaaatggagtat
gcggtgctgtctgcaatatgcttgatttctggagatcgctcaggattagaagaatcagag
agagtggaacagatgcaagaaccaatcctagaggcattgaaacattacgtgaggtcacgg
cggaaagatcaacctaatgtttttgcaaaaattctgtacaaacttacagatttaagaagc
attagtgtgaaaggagctgagagggttcttcacttacgactggaaatgccagatgaactt
cctccattaattgttgagatgctggatagacaggagaatgtgtgtattccgtga
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