Crassostrea virginica (eastern oyster): 111125256
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Entry
111125256 CDS
T09197
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111125256
04121 Ubiquitin system [BR:
cvn04121
]
111125256
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111125256
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111125256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
111125256
NCBI-ProteinID:
XP_022324558
UniProt:
A0A8B8D8W3
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Position
3:complement(245178..248140)
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AA seq
647 aa
AA seq
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MASEFEENNNNYEVYPYPGKAKSVVWKFFGFLKKAEGPPTKANLDMATAVCRVCGKKYAN
KGNTTIFKMHIDSDHGGEFEPKSKSKVQPCLDNFVKFNKPVGKISAERQLTIDDALNKLI
IGKVLPVSIVDNIYFKAFVGLLDPRYQIPSRPTVIKRLEEKKSKVEDKLKSQMKLATDIA
ITHGGWTSLNTESYYTTTVHFIDKNWCLQSAVLGTIKLAGSHTAQNIANELKNTQDHWSL
PVPTATSDNAANEQKAYEILGWNRFGCYGHRINLVVKNSLSLPEVSRVLGKARTLVAFFH
KSSSMTSMLHEKQKLLFTDSKVGHRLLIDVSTRWNSTLYMLQRLLEQAPVLMALANDASL
PKQASSTLKNSVFNFEELTMVEHLVQILLPFEKATTIVCADQHPTMHKVLPIVTKLLRST
ELSDDDSTVIKKIKQKMQAEMNKRTQSEDNSLMACLLNPFTKGLDFVSEERERAHALLRG
LVSGVTLVKMEAPDDGGKKPDVAPLPLLPQFPGEEEDENNSVEDLSQPTAAKKMKSADTD
DWLEDVVCTGENMDLGNASEHEIERYIGCQIEEIDHNLTVLEWWKKNSAFFPRLSVLAKK
FLAIPASSVSSEIVFSLGGQIVSKKRCRLSHNNVDLFIFLNKNMKYW
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagttcgaagaaaacaacaacaattacgaagtatatccctacccagggaaa
gcgaaatctgtggtctggaagttcttcggctttcttaaaaaggcagagggacctccaact
aaagccaatttggacatggcaacggctgtctgtcgtgtttgtggaaaaaaatacgctaat
aaaggaaacacgacaatttttaaaatgcacatagacagtgatcatggcggtgaatttgaa
ccaaaatcgaaatctaaggtccagccatgtctggataacttcgttaaattcaataagcct
gtcggaaaaataagtgccgaaagacagctgacaattgacgatgcattgaataaactcatt
attggcaaggttttaccagtgagcattgttgacaacatatatttcaaggcctttgttgga
ctcctagacccaagatatcagattccatccagaccaacagtcataaaacgattggaggaa
aagaagtcaaaagtggaagacaaacttaaaagtcaaatgaaacttgccacagatattgcg
ataacgcatggtggctggacgagcttgaatacagaatcttattacacaacaactgtacat
tttattgacaaaaattggtgcttacaaagtgctgttttagggacaataaaacttgcagga
agccatacagcacaaaatattgcaaatgaacttaagaatacacaagatcattggtcactt
cctgttccaactgcaacctcagacaatgcagccaatgaacaaaaagcttatgaaattttg
ggatggaacagatttggatgttatggacatagaataaatcttgtagtaaaaaattctctc
tcattgcctgaggttagcagagtattaggaaaggctagaacactggtagcgttttttcac
aagtccagtagcatgacatctatgttgcatgaaaaacaaaaactactttttactgacagt
aaagttggacacaggcttttaattgatgtgtcaaccagatggaactccactctttacatg
cttcagcgtctgcttgaacaggcacctgttctcatggcattagctaatgacgcatccttg
cctaaacaagcaagctcaacactcaagaactctgtttttaattttgaagaactgaccatg
gttgaacatctggtacagattctcttaccttttgaaaaagcaacaacgattgtttgtgca
gatcagcatcccacaatgcacaaagtccttcccattgttacaaaacttttgcgatcaact
gaactttcagatgatgattcgacagttatcaaaaagattaaacagaaaatgcaagcagag
atgaataagagaacacaatcagaggataattctctcatggcttgtttgttgaaccctttc
acaaaaggactagactttgtttctgaagaaagggaaagggcgcatgctcttttaagagga
ctcgttagtggagtcacccttgtcaagatggaagcaccagatgatggagggaaaaaacct
gatgttgcaccacttccattacttccacaatttcctggtgaagaggaggatgaaaacaat
agtgtggaagatcttagtcaaccaacagctgctaagaaaatgaaatctgcagacactgat
gattggttagaggatgttgtatgtactggagagaacatggatttaggcaatgcttcagag
catgaaattgaaaggtacataggctgtcaaattgaagaaattgaccacaatttaactgtt
ttagagtggtggaagaagaattccgcttttttcccaagactctctgttctggcaaagaaa
ttcctggcgatccctgcgtcttctgtatcttcagagatagtattcagtcttggcggacaa
atagtatccaaaaagagatgcagactgagccataataatgtggatctctttatatttctg
aacaaaaacatgaaatattggtag
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