Crassostrea virginica (eastern oyster): 111125289
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Entry
111125289 CDS
T09197
Name
(RefSeq) thyroid hormone receptor beta-like
KO
K08362
thyroid hormone receptor beta
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
cvn04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111125289
04081 Hormone signaling
111125289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111125289
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111125289
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111125289
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
111125289
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111125289
NCBI-ProteinID:
XP_022324609
UniProt:
A0A8B8DAL7
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Position
3:54292121..54305861
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AA seq
478 aa
AA seq
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MDIRLGCEKNEFVDGMNRGYVPYFPPAMMPTAQPTSFVLPEYNHVLPQRPPPSEGSNDEG
GASQYPGLSSQSSPDNSMPSPSSATSSTSSSSPSSSLASSDNGGSDAGNKRKGTPYIPSY
MDLTNGPEPCVVCGDAATGYHYRCMTCEGCKGFFRRTIQKNLQYHCKWNKMCSIDKNSRN
QCQECRFRKCLNVGMATDLVLNEKQRKAKRKLIEENREKRKQETMKVKPKSTEACNHDTL
TETDKTIIAEVTSAYEQTAVKVPIKEPINQDGLTSSDPEAWQQLAEAMTPSIVKVVEFAK
NVPGFIQLFVDDQILLLKSCCMEIMCLRAACRYDPEKETITMHNGVCLHKSQLKSEGLGL
LVEPIFEFAVGLSKLKLDKTELALLAAVLLMQSDRSGLKEPEAVEKLQDSILGAFKRYIA
TKRPHQPVHWAKILMKVTDLRTISTRHAERVLCIRLDHQGDIPPQLLDLFNEGQTYYS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgtttgggttgtgagaaaaatgagtttgttgacggaatgaatcgaggctat
gtgccatattttccgcctgccatgatgccgacagcacaaccgacatcgttcgttttaccg
gagtacaatcatgtgttaccacagaggcccccgcccagtgagggcagtaacgacgagggt
ggggcatcccaatacccagggctgtcctctcaatccagtccggacaactccatgccttcc
ccatccagtgcgacgtcatctacctcctcctcatcgccctcttcatcgctagcgtcgtcg
gataacggtgggagcgacgcagggaataagaggaaaggtaccccgtacatccccagttat
atggacctcaccaatggaccagagccatgcgtggtgtgcggggatgctgccactggctac
cactatcgctgtatgacctgtgaaggatgcaagggttttttccgtcgtacgatacagaaa
aacctacagtatcactgcaaatggaacaaaatgtgttcgatcgataaaaactctcgtaac
cagtgccaagagtgtagatttagaaaatgcttaaatgttggcatggcaacggatctcgtt
ttaaacgagaaacaaaggaaagctaagagaaaactgattgaggaaaacagagaaaaaaga
aaacaagaaaccatgaaagttaaacccaaatcgacagaggcctgtaatcatgataccttg
acagaaactgacaaaacaataatagcggaagtgacgtcagcttatgaacagactgctgtc
aaagtgccaatcaaagaacccatcaaccaagatggcttgacttcctctgatccagaagct
tggcagcagttagctgaggccatgacaccctccatcgttaaagttgtggagtttgccaaa
aatgttccagggtttattcaattgtttgtggatgaccaaattctgttgctaaaatcttgc
tgtatggagatcatgtgtcttcgagcagcctgtcgatacgatccagaaaaagagaccatc
actatgcataatggcgtctgtctacacaaatcacaacttaaatcagaaggtctaggactt
cttgttgaaccgatatttgagtttgcagttggattgtccaagttaaaactagacaagaca
gaactggctctacttgcagcagttctactcatgcaatcagatcgctctggtttaaaagaa
ccggaagctgttgaaaaacttcaggattccattctaggagcatttaagcgttatatagcg
actaagcgacctcaccaacccgttcactgggcaaagatcctgatgaaggtcacggacctc
cgcacgatcagtacccggcatgccgagcgcgtcctgtgcatcaggctggatcaccagggt
gatattcctccgcaattgttggacttatttaacgagggacagacatattatagctga
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