Crassostrea virginica (eastern oyster): 111125304
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Entry
111125304 CDS
T09197
Name
(RefSeq) sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111125304
04131 Membrane trafficking [BR:
cvn04131
]
111125304
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
111125304
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
111125304
Autophagy
Mitophagy
Other mitophagy associated proteins
111125304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
DUF6594
Motif
Other DBs
NCBI-GeneID:
111125304
NCBI-ProteinID:
XP_022324633
UniProt:
A0A8B8D944
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All DBs
Position
3:complement(49592535..49598398)
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AA seq
1105 aa
AA seq
DB search
MENVEGWTIPAAESLVDHGNDFLSANDFNSAALDDIDDIVQYMLSDTSSSKNDLFDGQLG
LLKPDTDTFIDPQPLQDPVKQELSFVSDEQFDLTSSNNSSSVLLSDANFSGDGLPGLEGL
DLLEATNGEPLKSPLVNISHFNSAQQLQQAALKLQKQAQLVQQQKQLLQLHQQQQQKQQQ
AQLLQQQLRLILQQAAQKSPPVVAQPPPQPQVQQQQVSLQQLQQLLLQSQALNQPVVTSI
SATSSSSPATQASHIVKTQNVTAQSQLVSSSSNIVTLSSISPSTLTPQQSSVTTTLPQVQ
TVVTSIPIQVVDSEKVPINRLNNPNKGPKKGEKRTSHNAIEKRYRLSINDKITELKDLVA
GTEAKLNKSAILKKAIDYIKFLVNTNNRLKQENMALKLAASKHCNIEDLLKQTPLTPPSS
EKGSPLHITQFGSDGESPPGSPMYESDSQSDSSLSGGNVMQTMRDQTRMALCIFMFGVLA
FNPFGALIGTNSKGENFMGQHAGRTLKNVNDGVTSGWWDWMFPTLLLWVLNGVVCVGVLL
RLLVFGEPVVKKNTEAAISFYRHKTQADAHLEKGNFSWATDQLRKCLASLGRPLPTSKLE
LVSGLAWNFLRQLLHRLVGKWMFTKPSSVGNKDDANSSARNAALVYHKLNQLHLSGHVPG
SSWWGVNLCLCAINMAEAAGDALPLTQLAEIYATCAIRIQTTLPGKFRYFSKFLLSRARK
ACLTSGDRLPPSIQWLSHPEGYRFFVRGNWTLGGKTSLFTTLGCEADPLEHVAQMFREYM
LEKALFSLVNPAKNKEGPTQSAEVLLYTQLLTDSATSTTKSVNLPGGGISTTTGGDELGQ
WWSAIVTVAINWLAGDEENAEAQYPMCDSFPQKLQQSDDPLPKAVLVAYRARRNLMSNTH
GSSHCIRQCDRAGRLLRESLKLSYAKQNEQIVQFLQLMVCDWLLTTRTELWEKNCKEEGA
TASQTEMIAFQQDLNSLRKLAQTHKNILSKVFLHEATARMMAGASPARTQQLLDRSIRRR
HTSKADKEGSDHSESDGTDRDQAKALLMAGKHLPENMLPCNNDRIALISEASKMYESLGD
KKSLQNCRQMIMQFEDKLSATTVLC
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggaaggctggacgattccagccgcagaaagtttagtagaccacggaaat
gattttttatctgcaaatgatttcaacagtgctgcactcgacgatatagatgatatcgtg
cagtatatgctatcggacacaagctccagcaagaatgacctatttgatggacaattgggt
ttgttgaagcctgacacagacacattcatagatcctcaacccctgcaagatccagtgaaa
caagagttgtcttttgtcagtgatgaacagtttgatttgacaagttcaaacaacagttcc
tctgtgctgttgagtgatgcaaacttcagtggcgatggccttccaggattggaggggttg
gatttattggaggcaaccaatggggagcccctaaagtctccgctcgtgaacatctctcat
tttaacagtgctcaacagcttcagcaggctgcgctaaagcttcagaagcaggcacagctt
gttcaacagcagaaacagttgctgcaacttcatcaacaacagcagcaaaagcaacagcag
gcacagctgttgcagcaacaactgagattaatcttgcaacaggcagcacaaaaatcacca
ccagttgttgcacagccgccacctcagccacaagttcagcagcagcaggtcagcttgcag
caactgcaacagttgttgctgcaatcccaagctttgaaccagcctgtagtcacgtccata
tctgccacatcatcatcgtcaccagcaacacaggcttcccacattgtgaaaacacagaat
gtcaccgcccagtcacaactggtttcctcatcatccaacattgtcacattgtcctctatc
tctccatccaccctgacccctcagcaatcttcagtcactaccacccttcctcaggtgcaa
actgtcgtaacaagtattccaattcaggtggtggacagtgaaaaagtccctattaatcgc
ctgaacaacccgaacaaagggcctaagaaaggagaaaagagaacttcccataatgcaatt
gaaaaacgttatcgtttgagcattaatgataaaattacagaactaaaggatttggtagca
ggcacagaagccaagttgaacaaatctgccattttgaagaaggcaattgactacatcaaa
ttcttggtaaatactaacaacagattgaagcaggaaaacatggcactcaaattagctgca
tcaaaacattgtaatattgaagacttattgaagcaaacaccactcactcctccaagttca
gaaaaaggatctcctcttcatatcactcaatttggaagtgatggagaatctccccctggc
agtcctatgtacgagtctgattcccagtcggattctagtctctcgggaggcaatgttatg
cagaccatgagagatcagactagaatggctctttgcatattcatgtttggggtgttggca
ttcaatccatttggagctctcattggaacaaactctaaaggggaaaatttcatgggccag
catgctggaagaacattgaaaaacgtgaatgatggggtgacaagtggctggtgggactgg
atgtttcctactctactactgtgggttctaaatggtgtggtgtgtgtgggagtgctactt
cgccttctggtttttggggaaccagttgtgaagaagaacacagaagcagctatatctttc
tacagacacaagacacaggctgatgctcatttggaaaagggtaatttttcatgggcaaca
gaccagttaaggaaatgcctagctagtttagggagacctctgccaacctccaagcttgag
cttgtctcgggactggcctggaatttcctacggcagctgcttcacaggctagttggaaag
tggatgttcaccaagccatcgtctgttggcaacaaagacgatgccaactcctctgccaga
aatgcagctcttgtctatcacaagctaaaccaacttcatttgtcaggtcatgttcctggc
agttcctggtggggagttaacctctgtctgtgtgccattaacatggccgaagctgctgga
gatgctcttccacttacccagttggcagaaatatatgccacatgtgcgataaggattcag
actactctacctgggaaatttagatatttttcgaagttcttgctaagtcgggcaaggaaa
gcctgcttgaccagtggagatcgtttgcctccaagcatccagtggctttctcatccagaa
ggctacaggttttttgtcagagggaattggactcttggtggcaaaaccagtctatttacc
acccttggatgtgaagctgatcctttggagcatgtagcccagatgttcagagaatacatg
ctggagaaggccttgttctcactggtcaatcctgccaagaataaggaaggacccacacag
tcagctgaagtgcttctgtatacacagcttctgacagacagtgccacttccaccaccaag
tctgtcaacctgccaggagggggaatcagcaccacaacaggtggggatgagttgggacag
tggtggtcagccattgttacggtggctatcaactggttagctggagacgaggagaatgcc
gaagctcagtatcctatgtgtgactccttccctcagaaactccaacagtcagatgatcct
ttaccaaaagctgtccttgttgcatatcgtgcaagaagaaacttgatgtccaacacccat
gggtcatctcactgcatcagacagtgtgacagagctggtcgtctactgagggagagcctg
aaattgtcctatgccaaacagaatgaacaaattgtacagttccttcagctcatggtttgt
gattggctattgacaacaagaactgaattgtgggaaaagaattgtaaagaagagggcgcc
acagcttcacaaacagaaatgattgctttccaacaggacctaaacagtctgaggaaacta
gcccaaactcataaaaatattctatcaaaggtgttcctgcatgaagccacagctagaatg
atggcaggtgccagtccggctagaactcagcagctgttggacagaagcataagaaggagg
catacaagtaaagcagataaagaaggatccgatcattcggaaagtgatggtacagaccga
gatcaagctaaagccttgttgatggctggcaaacatctaccagaaaatatgctaccttgt
aacaatgacagaatagccctgatctcagaggctagtaaaatgtatgaatccttaggggac
aagaaatccctacagaactgtcgtcaaatgataatgcagtttgaagacaaattgtcggca
actacagtgctatgttag
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integrated database retrieval system
