Crassostrea virginica (eastern oyster): 111125338
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Entry
111125338 CDS
T09197
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111125338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111125338
Transporters [BR:
cvn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111125338
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111125338
NCBI-ProteinID:
XP_022324755
UniProt:
A0A8B8D9Q9
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Position
1:complement(7235566..7250182)
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AA seq
619 aa
AA seq
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MEIQEKFTLSEDTGSEESEEREKWDKKAESILSMLGFCVGLGNIWRFPYLCMRNGGGAFL
IPFLFFLFFVGLPLYTLEVTVGQFSGKGIVKVWDVCPLFRGVGFGISILSTISCSYYIII
ISWTTYYLVNSFKSPLPWTLCGQDWNTPLCITQKESVASQDMNGTLFNVSLGAYDVNNLT
DLSEKGNKSAAFSSPEEEFWQANVLHLSDGLESIGRIQWHLALCFLAAWVMVYLCVVKGV
KTVGKVVYVTATLPYVLLLVILIRGLTLPGSLDGVLFYITPDFERLKDGKVWVEAAIQIF
YSSGIVWGALITMASYNKFHNKCLRDCYALVLAGEGTSIFGGFVVFSVLGYMAKENGVPI
EEVVKSGPGLGFIAYPEALAKLPLSNLWAVVFFIMLLTVGLDSTFGTIEPVYTALSDSFR
IWRKRRALLTALFSTVCFLVGLIMCTEGGMYVFQLIDWYSAAIAVPLFGFFECIVFGWIY
GAEMFSRDVALMTGQGIPALIRFSWCFVTPFILLVTMIVTLYSYVPPEYGSYKYPQWAQV
FGWFVAVIPLVPIPIFAYRELRNAPGSTLMEKLRKSLQPNEQWGPNHSEEKKRYKEENRE
LTGSLLQNIVINVTGKDLS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaggagaaattcacactgagcgaggatacaggatctgaggagagcgaagaa
cgagagaagtgggacaagaaagccgagtccattctgtccatgctgggcttttgtgtgggt
ctgggaaacatctggcgattcccgtacctctgtatgaggaatggcggcggtgcattcctc
attcccttcctcttcttcctcttcttcgtcggacttccgctatacaccttggaggtcacc
gtgggtcagttctcaggcaaaggaattgtcaaggtctgggatgtttgcccactcttcaga
ggcgtagggtttggaatctctattctttccacaatttcgtgttcatattacataatcata
atttcctggacaacttattatctggttaactccttcaagtctccgttaccatggacactg
tgtggtcaagactggaatacgcctttgtgcattacacaaaaggaatctgtcgcatcccaa
gacatgaatggaactctatttaacgtgtcgctcggtgcttatgacgtcaacaatttaacc
gatctgtccgaaaaaggaaataagtctgctgcattttcaagccctgaagaggagttttgg
caagcaaacgtcctccatttgtctgatggcctggagagcataggaaggatacagtggcac
ctggccctgtgtttcctagcggcctgggtgatggtttatttgtgcgtggtcaaaggtgta
aagacagtcggaaaggttgtttacgtcacggccacgcttccctatgtcctcctactggtg
attctgattcggggattgaccctgcccggatccttggacggtgttctgttttatatcaca
ccagattttgaacgattgaaggatggaaaagtatgggtggaagcagctatccagattttt
tactccagtggcattgtatggggagcacttataaccatggccagttacaacaaattccac
aacaaatgcttaagagattgctacgccctggtgttagcaggagagggaaccagtatattc
ggcggatttgtagtgttttcagtgctgggctatatggctaaagagaatggggtccccatc
gaagaggtggtcaaatcagggcccggtctgggttttatcgcttaccctgaggccctggcc
aagctgccactctccaatctgtgggccgtggtctttttcatcatgctcctcactgtgggt
ctagacagcacgtttgggaccattgagcctgtttacactgcactctccgactccttccgg
atctggcgcaaacgacgcgcgcttctgacggcgctgttctccaccgtgtgcttcctggtg
ggactgatcatgtgtacagagggcgggatgtacgttttccagctgattgattggtactcc
gccgctatagctgtgccgctcttcggattctttgaatgcattgtctttggttggatctac
ggtgccgagatgttctcgcgagatgtggcgctgatgacaggacaaggtatcccagcctta
attcggttcagctggtgcttcgtcacccctttcatattgttggtaacgatgatagtcacc
ctatattcctacgtacccccggagtacgggagttacaagtaccctcagtgggcccaggtc
tttggctggttcgtagctgtgattccgctggttcccatccccatttttgcttacagagaa
ttaaggaatgctcctggtagtacgcttatggagaaattaagaaagtctttgcagccaaac
gagcaatggggaccaaatcattccgaggagaaaaagagatacaaggaagagaaccgagaa
cttacaggaagcttattacaaaatattgtgattaatgtgacaggcaaagatttatcttaa
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