Crassostrea virginica (eastern oyster): 111125391
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Entry
111125391 CDS
T09197
Name
(RefSeq) liprin-alpha-1-like isoform X1
KO
K26226
liprin-alpha
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111125391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111125391
Membrane trafficking [BR:
cvn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111125391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
CCDC39
Rod_CreS
DUF1664
Motif
Other DBs
NCBI-GeneID:
111125391
NCBI-ProteinID:
XP_022324865
UniProt:
A0A8B8DB23
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Position
1:9957359..9992379
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AA seq
1199 aa
AA seq
DB search
MMCDVMPTISESGSNDRESQSSQDDANFEQLMVNMLDERDKLMETLRETQDTLSLTQQKL
VDVEKERDALQGQFQTTTPQQEYANLSKEVNQLRDQLLEREEEVSELKAERNNTRLLLEH
LECLVSRHERSLRMTVVKRQASSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALE
KVASLEEDLANANQELFTLREQQSKSRHSSGSTEDSLKPLKHEIAPQDTDHPKPEIHKQR
LSNGTIDPDSDVNRVIELQDTVEKQNSELTSSRTKVLELTNKLTELEETATTATKDLNKT
QEQLVKLQRDLRESLAQREDQEERIATLEKRYLNAQRESTSLHDLNDKLESELANKESHL
KSSEEKMRQVQEKLELAEQKLQQSLKKAEALPTVEAELQQRMEALNKAEELHGSAEERVS
RVEQKLMDNEAELSRARMREKMNEEHNTRLSATVDKLLAESNERLQLHLKERMAALEEKN
QLTQELERIRKALDENQQEKERISDDLVRANREVDTLRQQIEHLARYMPGSGYVMRSPME
EVTRRSQRGREQSLEEDPTKVNTLNEQEHEKLKQAQILEKLQQAFDASDTEGSENESVIE
AFDMWSPSGPTDAQTLALMLQEQLDAINNEIRLIQEEKETTEQRAEELESRVGSGSLDTI
ANRWRTSPPLSERATPTTRTLQTRDYLQKYHTAPAGMTTAHLYTYSSSSPQLATAANDHS
ISQMYSRDDSAINEENRQIKCESSPPTPRSLRLERAASGSHNTSVEDTPSRTVIDTTQSS
QSPFSTPNSSQDSLHKNQQQQQQQQKKKGIKSSLGRLFSKKEKQKAKGLPQDMLLPSGGG
FADLSDMGAGDALTLGLGQSEYDRRKKKKHELLEEAMKAGTPFALWNGPTVVAWLELWVG
MPAWYVAACRANVKSGAIMSALSDQEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPKP
TSSTLAFGDMNHEWIGNEWLPSIGLPQYRSHFMECLVDARMLDHLTKKDLRGQLKMVDSF
HRTSLQYAINCLKRVNYDKKELERRREESSTEIKDVLVWSNERLIKWVQSIGLREYANNL
IESGVHGALIALDESFDANSMALALQIPNQSPQQARQVLEREFGNMLVMGTDRRLDEGEG
GKLRRAPSWRKKFRTKDRSRESGDEGESGGTEGQTQQSPNTPDDREGQTTPCIAEPPNT
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgacgtgatgcctacgatttctgagtccggttctaacgaccgtgagtctcag
agctcgcaagatgacgccaacttcgagcagctgatggtgaacatgttagatgagagagat
aagttgatggagacacttcgggagactcaagacactctcagcctcactcagcaaaaactg
gtcgacgtggagaaggaacgagacgccttacaggggcaatttcagaccactacacctcag
caagaatatgcgaatttgtcaaaagaggtcaaccagttacgagatcaattgctagagaga
gaggaagaagtttcagagttaaaggcagagaggaataatactaggctgttactggagcat
ctggagtgtttggtgtccaggcatgagcgatctcttcggatgaccgtggtcaagcggcaa
gcctcgtccccggcaggggtctccagtgaagtggaggtcctcaaggccctcaagtcactg
tttgagcaccacaaggccctggacgaaaaggtcagagaacgtcttcgagtggccctggag
aaagtggcctcgttggaggaagatttggccaatgccaaccaagagttattcaccttacga
gaacaacagagtaagtctcgacattccagtggcagcactgaggacagtctaaaaccccta
aaacacgagatcgcacctcaagacacggaccatccaaaaccagaaattcacaagcaaagg
ctatcaaatggcactattgacccagattcagatgttaaccgggtcattgaactccaagac
acggtggagaaacagaactcagaactaacctcatccagaaccaaggttctagaattaacc
aataagctcacagagttagaggaaaccgcaaccactgccacaaaagacctgaacaaaact
caggaacagctggtgaagctacagagggacctccgagagtctcttgcccagagagaggat
caggaggagaggatagccaccctagagaagaggtacctaaacgcccagcgggaatccacc
tccctccatgacctgaacgacaagttagagtcggagctagccaacaaagaaagtcatctc
aaatcttctgaagagaagatgagacaagttcaagagaaactggaactggcagagcagaaa
cttcagcagtctctgaagaaggcggaggccttacccacagtggaggcggagctgcagcag
aggatggaagccctgaacaaggcggaggagttacacggctcagcggaggagagggtgtct
cgcgtggagcagaagctgatggacaacgaggcagaactctctagggcgagaatgcgagag
aagatgaatgaggagcacaacacgaggctgtctgccaccgtggacaagttactggccgag
tccaacgagcgactacagcttcacctgaaggagagaatggctgctctggaggagaagaac
cagctgactcaggaactggagcgtatccgcaaagcgctggacgaaaaccagcaagaaaag
gagaggatatcagatgatttggttcgagcaaaccgagaagtggacaccctcaggcagcaa
atagagcacctggccaggtacatgcctggctctgggtacgtaatgaggagtcctatggag
gaggtcacacggaggtcacagcggggtcgtgagcagtccctggaggaggatcccaccaag
gttaatactctaaacgagcaggagcatgagaagttgaagcaggctcagattctggagaaa
ctacagcaggcgtttgatgccagcgatacggagggcagcgagaatgaatcggtgattgag
gccttcgacatgtggtctcccagcggtcccactgatgcccagacgctggctctgatgctc
caagagcagttagacgcaataaataatgaaattaggttgatccaggaagagaaagagacg
acggaacagagagcagaagagctggaaagtcgggtagggagtggtagtcttgatacgatc
gccaacaggtggcgtacctctccgccactgagcgagagggccacgcccactactcgtaca
ttgcaaacgagagattaccttcaaaagtatcacaccgctcctgctggaatgaccactgcc
cacctgtatacctactcctcctctagtcctcagttagccaccgctgccaatgatcacagt
atatcgcagatgtacagtagagatgactccgccatcaatgaggagaaccgacaaatcaag
tgtgaatctagtccccccaccccccgatctctgaggctggagcgagctgcctcgggcagt
cacaacacttctgtcgaggacacgcccagtagaactgtgatagataccacccagtcctcc
cagagccccttcagtacccccaacagtagtcaggactctctccacaaaaaccagcaacaa
caacaacagcagcagaaaaagaagggcatcaagagctcactgggccgactcttcagcaag
aaggagaagcagaaagccaaaggcctacctcaagacatgcttcttccatccggtgggggc
tttgctgacctgagtgacatgggagcaggggacgccctgaccctgggactgggtcagtcc
gagtacgacaggaggaagaagaaaaagcatgagctgctggaggaagccatgaaggcaggg
actccgtttgccctgtggaatggccccaccgtggtagcctggctggagctgtgggtggga
atgcctgcatggtatgtggcagcctgcagggccaacgtcaaaagtggagctataatgtca
gccctctcagaccaggagatccagagggagatcggaatcagcaaccccctacaccgcctg
aagctccgcttggccattcaggagatggtcagcctcaccagtccctcggcccccaaacca
accagctctaccctggcgtttggggacatgaaccacgagtggatcgggaacgaatggctg
ccatccatcggcctcccccagtaccgcagccacttcatggagtgtctggtggacgctcgc
atgctggatcacctgaccaaaaaagatctgaggggacagttaaagatggtggatagcttt
catagaacaagtttacaatatgctattaattgtctaaaacgtgtgaattacgataagaag
gagctagagaggcggagagaggagagttctacggaaattaaagacgtgctggtctggtcc
aatgagagactgattaaatgggtccaatcgatagggctacgggaatatgcaaataacttg
atagaatctggggttcatggtgctctaattgccttagatgaaagctttgatgccaacagc
atggcattagcattacagatacccaaccaaagcccccagcaggcacgccaagtgttggag
cgggagtttggaaacatgttggtgatgggaacagaccgacgtctggacgagggtgaggga
gggaagttgagacgagctccatcttggaggaagaagtttaggaccaaggacagaagtcgc
gagagtggggacgagggagagtctggcgggaccgagggtcagacccaacagtcccccaac
acgcccgacgacagggaggggcagacaactccatgcatcgccgaaccaccgaacacatga
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integrated database retrieval system