Crassostrea virginica (eastern oyster): 111125411
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Entry
111125411 CDS
T09197
Name
(RefSeq) protocadherin beta-8-like isoform X1
KO
K16498
protocadherin delta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03273
Virion - Lassa virus and SFTS virus
cvn04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111125411
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
111125411
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111125411
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111125411
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111125411
Cell adhesion molecules [BR:
cvn04515
]
Cadherins
Protocadherins
111125411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Cad99C_N
Cadherin_2
Cadherin_FAT4_N
Ig_CLSTN
RET_CLD1
Fibulin_C
Cadherin_CELSR2_9th
MLANA
Epigen_C
Motif
Other DBs
NCBI-GeneID:
111125411
NCBI-ProteinID:
XP_022324902
UniProt:
A0A8B8D9Y0
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All DBs
Position
3:41376340..41385834
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AA seq
956 aa
AA seq
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MFIFSIVQILLALCAFVEAREVNYTILEENQPDYFLGKVSDDAKLHELLTTGDVTDVQYN
ILYSGNKDASWFTINDKSSALFASKSIDRDVICKYLTTCVLKFDVIAQSSGSGSFFHKVS
VSVTVNDENDNVPKFPNPVVRQIVSEASVPGAATPLMGAEDLDAGRNGIQTYRLLPENVP
FNLTAEYYANGRSQLQLIVTGKLDRETKNNYDLLILAVDGGQPAKTGTLTLNIVIGDIND
NPPIFEKSMYNISIAEDVVPLTTVLALRATDKDSGENGRVIYRLSDHQSDSIHRTFKVEA
TTGELKVIKSLIEERKANYEIIVEASDNASNPLISQVPVFVTLLDTQNTAPEVILNIFPS
GGNTVDVSENSAIGTVLALISVKDPDSGPNGQVECAINDNNFSLVKYDDSAEFNVILNKT
LDREKKSVHHVTITCSDAGSPPLSVTSEFTVHVSDSNDNPPLFTRKVYQTSVTESNPVPI
NIGQVQAQDADNTKNISYSIEQSNSYSQWFEIDSESGAIFLNHSLDRETSPEIELQIKAT
DNGLPLLTGSAIFKISVADINDNKPVFHSKTFEYWIPENFSVNTMIASLSIMDADAGLNG
QISISASSNDGHSSLPFMFLEDGSIFTSGDLDREKCDRYRIHLTAYDHGSPSLNSTVNLT
IHIQDINDNPPVIQFPPSDTPYLEIPYTTTEDSVIMNIQATDLDQGENSRVNYLLDGDNI
TVDMFSLHNETGQLSLNRDLEISDVGVRSFFIIARDNGVPPKEAKRAFSIRISSQLTSSH
RQPGEESVKYYAIAIAIGCVTVVLSAIIIFAICYVRRRDRHKADTSNGSVTSNSTLETDL
SHSEIRMNGGYHRTFTQPSVTKPAWRPPREKQVSFKETTDVREQMNRSPREPEVVSDDVV
IWEYASEAGDTYHPYSDPYGSLPHKRQIPNLYSKNQVEWASDNENGQWTPNSDVMI
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcttcagtatcgttcagattctgttggctttgtgtgcattcgtagaagctaga
gaggtgaactacactatattggaagaaaaccaaccggattatttcctgggaaaagtttca
gacgatgcaaaattacacgaacttctgaccacgggtgacgttacagatgtacagtacaat
attctttactcgggtaacaaggacgctagttggttcaccatcaacgacaagagtagtgca
ttgttcgccagcaaatcaattgacagagatgtaatctgtaaatatttaaccacttgtgtt
cttaaatttgacgttatcgcccagtcctctggcagcggctcatttttccataaagtatcc
gtatcagtgaccgtgaacgacgagaatgacaatgtacctaagtttccaaatccggtggta
cggcaaatcgtctccgaggcgtccgttccgggggcagcaacgccacttatgggtgcagaa
gatcttgacgccggaagaaacggcattcagacctatcgattattgccggaaaatgttcct
ttcaacttaacggcggaatattatgctaatggccgatctcagttgcaattaatagtcaca
ggaaaattagaccgagaaaccaaaaataattacgaccttcttatattagcagtggatggg
ggacagcctgcgaaaacgggtactctgactttgaacattgtcattggcgatattaatgat
aatccccctatatttgaaaagtcaatgtacaatatttctattgctgaggacgtggtccca
ctgaccacggttctagcactcagagcaacggacaaggactcaggcgagaacggccgagta
atctatagattaagtgaccatcaatctgatagcattcacagaaccttcaaagtagaagca
acaacaggtgaattaaaagtaatcaaaagtttaatagaagaaagaaaagcaaactatgaa
atcattgtcgaggcatctgacaatgcgtcaaatcctttaatatcacaggtgcccgttttt
gtcacccttttagatacacaaaacactgcccctgaagttatactcaatatttttccaagt
ggtggaaacaccgttgatgtgtcagagaactcagcaataggaacagttttagctttgata
tctgtcaaagatcccgattcaggtcctaatggccaagtggaatgtgcaataaatgataac
aatttttcattagtaaaatacgatgacagtgctgaatttaacgtcattttgaataaaact
ttagacagagagaagaaatcggttcatcacgtgactattacgtgtagtgatgctggctct
ccgccattaagtgtgacgtcagagtttactgtccatgtgtccgattcaaatgacaatccg
ccattattcacccgtaaggtttatcagacgtccgtcacagaaagcaacccggttcccata
aacataggccaagttcaggcccaagatgcagataataccaaaaatatttcctacagcata
gaacagagcaattcttattctcagtggtttgaaatcgatagtgaaagtggtgccattttc
ttaaaccattctttggacagagaaacctcgccagaaattgaacttcaaataaaggctact
gataatggtttgccattattaactggaagtgcaatatttaagattagtgtagctgatatt
aatgacaacaagcctgttttccactccaaaacgtttgaatactggatcccagaaaacttt
tcagttaacacgatgatagcctcattaagcattatggacgcagacgccggtctgaatgga
caaatttctatatctgcttcatcgaatgacggtcatagttctctacctttcatgtttctc
gaggatgggtctatctttacttctggggatttagacagagaaaaatgtgatagataccgg
attcatcttacagcttatgatcatggatccccctctcttaactctactgttaatcttacg
attcatatccaagacatcaacgacaacccgccagtaatccaatttcccccttcagacact
ccgtatttggagattccctatactaccacagaagacagcgtgattatgaacatacaagcc
accgacttggaccaaggggagaattcgcgagttaattatcttcttgatggggacaatatc
accgttgacatgttttctcttcataacgagaccggtcagctttcattgaatcgcgattta
gaaatcagcgatgttggtgttcggagtttcttcattattgctcgggacaatggtgtaccc
ccaaaggaagcaaaaagggcgttcagtattagaatttcttctcaattaacctcatcccac
cggcagccaggggaggagtcggtcaaatattacgcaatagccatagccattgggtgcgtc
accgtcgttttgtcggccatcatcatcttcgccatctgttacgtcagacgcagggaccgc
cataaagccgacacctccaacggaagtgtgacgtcaaattcgacgttggagactgacctt
agtcacagtgaaatccggatgaacggtgggtaccaccggacgttcactcagcccagtgtg
acaaaaccagcatggagacctccgcgggaaaaacaggtctcgttcaaagaaactacagat
gtaagggaacagatgaatagaagtcctagggaaccggaagtggtatctgatgacgtcgta
atttgggaatatgcaagtgaggctggggatacttatcatccttacagcgacccttatggt
tctcttcctcataagagacagattccgaatttgtacagcaagaaccaggttgaatgggcc
tctgacaacgagaatggacaatggacgccaaactcagacgtgatgatttga
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