Crassostrea virginica (eastern oyster): 111125412
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Entry
111125412 CDS
T09197
Name
(RefSeq) protocadherin-11 Y-linked-like
KO
K16498
protocadherin delta 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111125412
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111125412
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvn04515
]
111125412
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111125412
Cell adhesion molecules [BR:
cvn04515
]
Cadherins
Protocadherins
111125412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_pro
RIFIN
Motif
Other DBs
NCBI-GeneID:
111125412
NCBI-ProteinID:
XP_022324904
UniProt:
A0A8B8DBG7
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All DBs
Position
3:complement(41396226..41403384)
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AA seq
922 aa
AA seq
DB search
MKLPQGCVFLLLVLHACAFEVTYNITEESKSGLLVGNVAADAGLPDVNSLTFSLFQAGYP
AAKSFSITEFQGELYTNATIDRDTICEFQDQCVLNLVAVAITEARDFYKIKIYVNVIDIN
DNSPIFPKSAVSLQISEDTTINFSYSLEGAVDLDTGINSVERYVIPSHDSPFQAEADKFP
DGRSMLKLILKQTLDRETHPNYLVQVVAYDGGSPPKTGSMTVNVTIGDINDNYPIFSKSS
YNVTIMDDLPVNSVVVKTFASDLDEGLNGEVQYRLDQRQAEEIFQTFNMNSTTGELYLKQ
SLLSGSQESYQILIEASDTGNQPLISKSQVFVRVQDNHNNFPVINVNVLSGSDTAEVSEH
ASQGTVVAHIAVKDPDTGANGLVTCDVISEYFKIQKFEENEYKVVVFASLNREMRDNYEV
TVNCKDAGSPPREANFTFPVVVVDENDNPPQFERQIYYANILENNAVGISLLTVSATDDD
IGVNAELKYSVSKEAEFLVSIDETSGSLTLDKALDREEHSQISFYVFATDSGNVPLTGTT
RVNIIVKDENDNKPTYPESILTFSVPENLVAPRIIGFVSAFDKDQGINSEVRHYLMTSNS
GESPPFEVKENGTVMVTRPLDRETVALYELQIMAMDKGSPAKTGYSFIKVIVEDTNDNEP
VFIFPSEANRSITVPLSSSQNTVVATLTASDKDIDVNAQLRYYTDDQNMTETFVINSASG
EVIIARALDSSDLGLFVYKVKVQDSSKTPLTSEETLLITVIANSVVDDSSFSRYYVIAIC
MSTVTIVLAIVILVAIYLLRKGDSKRKRYDSAHSTLSIVSKDVEDPAGYYDNSPPVPKEV
FYPPGYDLGNRQFFPIDRSISLQVPPTIPEAEPLPKIPSDPNLWEGSESENEKERNRNQL
MTLQYHQSLMRIQSIKRSNSTI
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaccacaaggttgcgttttcttgttgctcgttcttcatgcgtgtgctttcgaa
gtgacttacaatataacagaggaatcaaagagcggtttattggtaggaaacgttgcggct
gatgcgggattgcccgatgtcaacagcctgacgtttagcttgttccaggccgggtatccc
gcggccaaatccttcagcatcacagagttccaaggagagttgtataccaacgccacaatt
gacagggacacgatttgtgaatttcaagaccagtgtgtactcaatctagtggccgttgca
ataactgaagcaagggatttctacaagattaaaatatacgtcaacgttatagacataaat
gacaactcgcccatatttccaaagagtgctgtcagtttacagatatccgaggatacgact
atcaatttttcatattctctggaaggcgctgtggatttagatactggtatcaactcggtg
gagaggtatgtgatcccatcgcacgattcgccattccaagctgaggccgacaagtttcct
gatggccgttctatgttaaagctcatcctcaagcaaacacttgatagagaaacacaccct
aactatctggttcaagtcgtggcttatgacggcgggagtccccccaagacggggtctatg
actgtaaatgttactataggggatatcaatgataattatccaatattttcaaagtcctcc
tacaatgttaccataatggatgacctcccggtgaattctgtggtcgtcaagacatttgct
agtgatttggatgaaggtttgaacggggaagtgcagtaccgcttagaccaacgccaagcg
gaagagatttttcaaacattcaatatgaactcgacaacaggtgaactatatcttaaacag
tcacttctttccggttctcaggaaagctaccaaattctgatagaagcaagcgacacgggc
aatcagcccctgatatcaaaatcacaggtctttgtgcgcgtgcaagataatcacaataac
tttccggtgatcaatgtgaatgttttgtctggcagtgatactgctgaagtatcagaacac
gctagtcagggcaccgtggtagcacatattgcagtaaaagaccctgacaccggcgcgaat
gggctggtaacgtgcgatgttatcagtgagtatttcaagattcaaaagtttgaagaaaat
gagtacaaagttgtggtcttcgcgtcgttaaatcgagaaatgagagataattatgaagtg
acagtcaactgcaaagacgccggcagcccacccagagaagctaactttactttccctgtc
gttgttgtcgatgagaatgacaatcccccacaatttgaaagacaaatatactatgcaaat
atactcgaaaacaatgctgttggaatcagtctgttaacggtgtctgcgacagatgatgac
ataggtgttaatgcggagctgaaatattctgtctcaaaagaagccgaatttttggtcagt
atcgatgaaacttccggtagtttgactctagataaagctcttgaccgagaagaacacagt
caaatctccttctatgtatttgctacagattctggaaatgttccccttaccggaacaact
agagttaacataattgtcaaagatgaaaacgataacaaacccacgtatccggaaagtatc
ctcacgttttcagtaccagagaatttagttgcacccaggataataggatttgtctcggca
ttcgacaaggaccagggaatcaattcagaggtacgacattatctgatgacttcgaactca
ggcgagtcccctcctttcgaagtgaaagaaaatggcacagtgatggtaactcgacccctc
gacagagagactgttgctttgtacgagttacaaataatggccatggacaaaggttctcca
gcaaaaactgggtattctttcataaaagtaattgtggaggatacaaacgataacgaacca
gttttcatcttccccagtgaggccaatcgttccattacggtccctctctcctcttctcag
aacactgttgtcgcgaccttgaccgctagtgacaaggacattgatgttaatgctcagctg
agatactacacagatgatcagaatatgactgagacgtttgtcatcaacagtgccagtggg
gaagttataattgcgcgagcactggactccagtgaccttggcctgtttgtgtataaagtc
aaagttcaagactccagcaaaactcctcttacttcagaagaaactttgctcattactgtg
atagccaactcagtagtggacgattcaagtttttcgcggtactatgtgattgctatttgt
atgtcgacagtgacgattgtattggccattgtgatattggttgcaatatatttattacga
aagggggacagtaaaagaaaaaggtatgacagcgcccattcaactctctccatcgtatcc
aaagatgtggaagaccccgcgggttactatgacaactcccctccagtccctaaagaggtc
ttctatccacccggatatgatctgggcaacagacaatttttcccaattgatcgctccatt
tctctacaggtgccacccacaattccggaggcagagccgcttcccaaaattccaagtgac
cccaatttgtgggagggcagtgagagcgagaacgagaaggagcggaaccggaaccagttg
atgacgttgcagtaccaccaatcgctgatgaggatacaaagcatcaaacgatccaactcg
acaatttga
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