Crassostrea virginica (eastern oyster): 111125457
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Entry
111125457 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111125457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111125457
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111125457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Motif
Other DBs
NCBI-GeneID:
111125457
NCBI-ProteinID:
XP_022324998
UniProt:
A0A8B8DA99
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Position
3:55218650..55230889
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AA seq
579 aa
AA seq
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MTSTDISSVTDQLAKTKVDEQYELSFKGKGLKLNAAADAKEIVTEIEKCKLMTALRMEGN
TLGVDAAEAIAKALEKHPEFQRAHWSDMFTGRLKTEIPKALEFLGAAIMKAGSGLVELDL
SDNAFGPNGVXGLVALLKSPSCYTLQELRLNNNGLGIGGGKMLAECLTECHQNSVKAGKP
LKLRVFVSGRNRLENPGATALAGVFKALGSLEEVAMPQNGIYAEGITALAEAFAENKNXR
VMNLSDNTFTQKGAKNMANVLPKLQNLEVINFGDCLVRTGGAIALSNALKEGHQNSRLLP
VNQLGRFKLSGNEISKHGASVTVENMNNKPNLKKXDLNCNMLGEEGIQGVREAMKKXNKL
EILASLSDDEGSEDENEEEEENEEEADEEDVGQDVAEGEEVNDPELQVKGKAISPNKQTT
AKEFLDFPSASKLLQLGSGRAQALREQLGADVNDLEKAVQAFMKISSVVTVDDTKTKEAA
CDSADQIIEEAVKCNQENDAVLLANTILVHIGVLKGEEKTYKPPSNITGPLLVLEHIVRQ
PYFPKFSREMLQAFCSKPHPLLDSASQARHKLLQTLYAF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacagatatatcaagtgttacagaccagctggcgaaaacaaaagttgatgaa
caatatgagctcagttttaaaggaaagggcttaaagttaaacgctgccgctgatgcaaaa
gaaattgtcacagaaatagaaaaatgcaaattaatgacagctctacgaatggaaggaaat
actttaggagttgatgctgctgaggcgattgcaaaagcacttgagaaacacccagaattt
cagagagctcattggagtgacatgtttacagggagattaaaaacagaaataccaaaagct
ttggagtttttaggagcagccatcatgaaggcaggatctggattagtggaactggacctg
agtgacaatgcctttggtccaaatggtgtgngtgggttggtggctctcctgaaaagtccc
agctgttacacactacaagaacttcgtctcaataacaatggcctgggaataggtggagga
aagatgttagcagaatgtttaacagaatgtcatcaaaacagtgtaaaagctggtaaacca
ctgaagctgagagtctttgtttctggtcgaaaccgactggaaaatccaggagcaactgca
ttagctggtgtttttaaagctctgggttccctggaggaagtggccatgcctcagaatggg
atttatgccgaaggaatcacagcactggcagaggcgtttgctgaaaacaaaaatnctaga
gtgatgaacctcagtgacaacactttcacacaaaagggggccaagaatatggcaaatgtc
ttaccaaagttacagaacttagaggtcataaattttggtgattgtctggtgaggaccggg
ggtgccattgccttgtccaatgcacttaaggagggacaccaaaactcaaggttattacct
gtcaaccagttaggaaggtttaaattgtctggaaacgagataagcaaacatggagccagt
gttaccgtagaaaacatgaacaataaaccgaacctgaaaaaantggatctaaattgtaac
atgctgggagaggagggtatacaaggagtccgagaagccatgaaaaaanttaataaacta
gaaatcttggcatcactcagtgatgatgaaggatcagaagatgaaaatgaagaagaagaa
gaaaatgaggaggaggctgatgaggaggatgtagggcaagacgttgctgaaggagaggag
gtgaatgaccctgaactccaggtcaagggcaaagctatttctcctaacaaacagacaaca
gccaaagagttcctggacttcccatcagccagtaagcttctacagctggggagtggcaga
gcacaggccctcagggagcaattaggggctgatgtgaatgatttagaaaaagctgtgcaa
gcattcatgaagatatccagtgtggtgacagtggatgatacaaagacaaaagaggcagcg
tgcgacagtgcagaccaaattattgaagaagctgtgaaatgtaatcaggaaaatgatgct
gttttgctggcaaacacaattttagtgcatattggtgtattaaagggagaagagaaaaca
tacaaaccaccaagcaacataactgggcctttgttggtgttagaacatatcgtacgccaa
ccatactttcccaaattctcaagggaaatgttacaagcattttgtagcaagccacatcca
cttcttgactctgcatcacaagccagacataaacttttacagaccttgtatgcattttaa
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