Crassostrea virginica (eastern oyster): 111125468
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Entry
111125468 CDS
T09197
Name
(RefSeq) protein Red-like
KO
K13109
IK cytokine
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111125468
Spliceosome [BR:
cvn03041
]
Complex B
Other components
Complex B specific factors
111125468
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GFIT
Motif
Pfam:
RED_N
RED_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
111125468
NCBI-ProteinID:
XP_022325058
UniProt:
A0A8B8DAI4
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Position
3:5996354..6010134
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AA seq
600 aa
AA seq
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MPERGETEVFSNPLPPQNYEDLGEDDDGQHLTNEDFRKMLMTPRVSSSGSASSSSAAAAH
HGTKPVVPHLKKPASALPRPEEDEDDPATRRRKKKIYYAKLKRLEEERQKELESKYRDRA
RERRDGVNKDYAETEIISTTADYRAVGPEAKVGDNYAEKRKQLIQESKYLGGDMEHTHLV
KGLDFALLEKVRAEISYKEREEEELLEEVVTQKKEDREVDPEEQMHFKTKMGRNIYRTCF
KHRFPERNELFLPGRMAYVVDLEDEYAENDVPCTTIRSKADCPSLEATTTLTTNDIVINK
LTQILSYLRQGRRESKKLKKKEKGKTKDDDKPKEKLPGADDNIYTDVGDYMPSYSKSKDK
RDKKDRGRDRDRDDHRDRGKDRDRERDYRDRDRDRRDRGRDRDRHGDRDRDRDGHRERRE
DRKRKSYFEKPVEEEDDRTKAPGSAGDLVRTINDRFKGFADVEKEKEKDKADKHKKWMEK
LQEKTLIDSYAECYPGMEEADDALGDSDDEADFSKMDQGNKKGPVGRWDFDTQEEYSDYM
ANKEALPKAAFQYGVKMADGRKTRRAGPKDEKAELDRQWQKIQNILKTKSGEPGGKKMKH
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgtggtgaaacggaggttttctccaatccactgcctccacaaaattatgag
gaccttggtgaagatgatgatgggcaacatctcactaatgaggatttccgtaagatgctg
atgactcccagggtttcctcctccgggtctgcttcctcttcctccgcggcggctgcacac
cacgggacaaagccggtggtgccgcacctgaaaaaaccagcgtcagcgctaccaagacca
gaggaagacgaggatgacccagccaccaggaggaggaaaaagaaaatttactacgccaaa
ctgaaaagactggaagaggagcgacagaaggaattggagtctaaatacagggacagggcc
agagagaggcgagatggagtcaataaggattacgccgagacagaaatcatcagcactacc
gcggattaccgagcagtgggaccggaagccaaagtgggagacaactacgcggagaagcgt
aaacagctgattcaggagtcaaagtaccttggaggtgacatggagcacactcacttggtg
aagggtctggacttcgctctgctggagaaggtcagggcagaaatcagctacaaagagcgc
gaggaggaagagttgttggaggaagtggtcactcagaagaaggaagaccgagaagtagac
cccgaagagcagatgcatttcaagacaaaaatgggcaggaacatctacagaacgtgcttt
aagcaccgatttccggagaggaacgagctgtttttacctggacggatggcgtatgtcgtg
gatctggaggacgagtatgcggagaatgacgtcccctgcaccacaatccgcagtaaggcg
gactgccctagtctggaggccaccaccaccctgaccaccaacgacattgtcatcaacaag
ttgacccagattctgtcctatctaagacaaggtcgcagggagagcaagaagctcaagaag
aaggagaaaggaaagaccaaggatgatgacaaaccaaaagagaaactcccaggagcggat
gacaatatctacactgatgttggggattacatgccgtcttactcaaaatccaaagacaag
agagacaagaaggatcgtggccgagatagagaccgagatgaccaccgagacagaggaaag
gaccgagatagggagcgagactaccgagacagagacagggacaggagagatcggggccga
gatagagatcgccacggtgatagagacagagacagggacggccacagagagaggagggag
gaccggaagaggaagtcctactttgagaaaccagtggaggaggaggatgacagaacgaag
gcaccagggtcagcaggtgaccttgtcaggaccatcaatgacaggttcaagggatttgct
gacgttgaaaaagaaaaggaaaaggacaaggccgacaaacacaagaagtggatggagaaa
ctgcaggagaagactctcatcgacagctatgccgagtgttacccaggtatggaggaagca
gatgatgccctgggcgactcggatgatgaggcggacttcagtaagatggaccagggcaat
aagaagggccctgtggggcgctgggactttgacactcaggaggagtacagcgattacatg
gccaacaaggaagccctgcccaaggcggctttccagtacggagtcaaaatggcggacggt
cgtaagactcggcgtgctggaccgaaggacgagaaggcggagctagaccgacaatggcag
aagattcagaacatcctgaagaccaagtccggggagcccgggggcaagaagatgaagcac
tga
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