Crassostrea virginica (eastern oyster): 111125498
Help
Entry
111125498 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111125498
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111125498
Factors involved in mRNA localization
Other mRNA localization factors
111125498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
111125498
NCBI-ProteinID:
XP_022325108
UniProt:
A0A8B8DAN5
LinkDB
All DBs
Position
3:62990183..63013323
Genome browser
AA seq
1296 aa
AA seq
DB search
MLLPQTIMGRVRIGNTDLLNDLIDIRKTVRMGDHLVGEKITLTDALQNVDVLDELPLPDQ
QPCIEGMSLSIQYQANFDXNFEDRSAYVTGVAKYIEEATVHADLNKLLEEGQEFAAMLYT
WRCCSRALPQVKSNEQPNRVEIYNKIVEVLDPQVSKLMDLMYFTKRAIERFGNEVKRLCH
KEKRNDFVSEAYLLTLGKFINTFAELDELKNMKASVKNDYSAYRRAAQFLKVMADPQSLQ
ESQNLSMFLATQNKIRDMLKDALEITPGYEELLADVVNISVHMYENRLFLEPSEKHMLVK
VMAFGLFLMDNKENSIYKMDGKKRINLTKIDRILKQLEVVPLYGDMQIKPYHYIQKSLNF
DPSRWTFCESSQLSPQSNLLANLEAIREDHMAYISQLARHSNEAITTTRECPRTDIENKE
LSDLALRGLHLMSAWTQQVMELYSWKLLHPTDTHQNPECPQDAEEYERSTRYNYSSDEKF
AIVEVIAMIKGLQLLMARMESVFLDAIRRHIYAALQDFVQLGLRDPLRKLLXKKNDVIKV
LILSVRDTCVDWMRGVEPHDDPAMKGKKDPDEGFTIKVPRRNVGPSTTQLYMVRTMLESL
IADKSGGSGKKTLRKDIDGQHLMAIDQFHKESFYWNYLLNFNDSLHRCCDLSQLWYREFF
LEMTMGKRIQFPIEMSMPWILTDHVLETKDASMMEYILYPLDLYNDSGHYALTKFHKQFL
YDEVEAEVNLCFDQFVYKLSDQIFAYYKHLAGSIMLDKRFRAECASFGTKILYPVANRYQ
TLLKQRHVQILGRSIDLNRLIGQRVNASLQKALDVAISRFEGGELTGIVELEGLVECNRL
AHKLMNKFIKLNDFDAMMREANHNVSAPYGRITLHVFWEVNYDFLPNYCYNAATNRFVKT
VLPFAPASQREKQPNPSYSYIWGTKALTTSYSAIYGLYHGFVGVPHFKSICRLLGYQGIA
VVIEELLKIVQALLKGTLMDYVKTLMTVMPNVCRLLRYDYGSPGVMGYYQAQLAELIQYP
DLRTEVFQSFREVGNAILFCMLVEQALTQEEVCDLKHAAPFQNIIPKPFIPIKEGDNRKE
KEQELKTLMKRLEAKYAALQVVPVISKLGTPQQADIAAEGDLLTRERLCCGLSMFEIVLT
RIKTFVEDPIWHGQPPSNGVMNIDECTEFHRLWSAIQFVYCMPVRENEYSIEELYGEGLN
WAGCALIVLLSQQRRFEALDFCYHXLKVNRVDMKDENVKGIQLKKMVDRIRKFQILNNQI
FAVLNKYLKTSDSESIPVEHVRCFQPPIHQSLATTI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgctacttccgcaaacaataatgggcagggtaaggatcggaaatacagacctacttaat
gatttgattgatataagaaaaactgtgagaatgggtgatcatttagtaggtgagaaaatc
acattgacagatgctctccaaaatgtggatgttttggatgagttgcctctcccggatcag
cagccatgcattgagggaatgtccctctccatacaataccaagccaactttgacnacaac
tttgaagacagaagtgcttatgttacaggagtcgcaaagtatatagaagaggcaactgtc
catgctgatcttaataaattgctggaggagggacaggagtttgctgctatgctgtacact
tggaggtgctgctccagagctttgccacaggtcaaaagtaatgagcagccaaacagagtt
gagatttacaacaagattgtggaggttctagatccacaagtttccaaattaatggacctc
atgtatttcacaaaaagagcaatagaaagatttggcaatgaagtcaaaaggctttgtcat
aaggagaagaggaatgattttgtctcagaagcctacctgttaaccttggggaaattcatc
aacacttttgcagagttagatgaacttaaaaacatgaaagctagtgtcaaaaatgattac
tctgcttacagaagggctgcacagtttttgaaagtaatggcagatccccagtctcttcaa
gaatctcagaatctctccatgtttctggccactcagaacaaaattcgagacatgcttaag
gatgccctggaaatcaccccaggctacgaggagctactggcggatgtcgtcaatatctca
gtccacatgtatgaaaaccgcctctttctggagccatcagaaaaacacatgctagtaaag
gtcatggcatttggattatttctgatggacaataaggaaaacagtatctacaaaatggat
ggcaaaaagagaattaatttaactaaaatagataggatactaaagcaactggaagttgtc
cccctttatggtgacatgcagatcaaaccataccattacattcaaaagagtttgaacttt
gacccctcacgatggacattttgtgagtctagccagctaagtccccaatctaacctgctg
gcaaatctggaggccattagagaggatcacatggcatacatcagtcaattggcaaggcac
agcaatgaggccatcaccacaactcgagagtgtcctagaactgacattgagaacaaggag
ttgagcgacctagccctgcggggactgcatctgatgtcagcctggactcagcaggtcatg
gaactgtattcctggaaattattgcatcccactgacacccaccaaaatccggaatgtcct
caagatgcagaggaatatgaaagatcaacacgctacaactatagcagtgatgaaaagttt
gccattgtggaagtgattgccatgattaaagggctgcaactcttgatggccagaatggaa
tcagtatttcttgatgctataaggcggcatatatatgcagccttacaggactttgtacaa
cttggcttaagagatcccctcagaaagctattanngaagaagaatgatgtcattaaagta
ttgatactctctgtaagagacacctgtgttgattggatgagaggggtggagcctcatgat
gatcctgccatgaagggaaagaaggatccagatgaaggtttcaccatcaaagtacctcgc
agaaatgtcggtccctcaaccacacagctatacatggtgagaaccatgttggagtccctg
attgctgacaaaagcggggggagtggcaagaaaactctgaggaaagatattgatgggcaa
catctgatggccattgaccagtttcacaaagaatccttttactggaattacctcctcaac
tttaatgattcccttcacagatgttgtgacttgtctcaattgtggtacagagaattcttc
ttagaaatgaccatgggaaaaagaatacagtttccaattgaaatgtctatgccttggatt
ctcacagaccatgtcttggaaacaaaagatgcctcaatgatggaatacattctgtatccc
ttggatttgtacaatgatagtggtcattacgccttgaccaagtttcacaaacagtttctt
tatgatgaggtggaagcagaggtaaatctctgctttgatcagtttgtgtacaaactcagt
gatcaaatctttgcctattacaaacacttggctggcagcataatgcttgacaaaagattt
cgggcagaatgtgcaagttttggaaccaagattctttatccagttgccaatagataccag
acccttctgaagcagagacatgtccagattttgggtcgttcaatagatctgaatcgtttg
attgggcagagagtcaacgcctccttacaaaaggcactagatgttgctatatccaggttt
gagggaggagagttgacaggcatagtagaattggaaggacttgtcgagtgtaaccgtttg
gcccacaaactgatgaacaagttcataaaactgaatgattttgatgccatgatgagggaa
gccaatcacaatgtgtctgccccttatggtagaatcaccctccatgtgttctgggaggtt
aactatgacttcctccccaactactgctacaacgcagccaccaatagatttgttaagact
gttctgccatttgcccctgctagtcaaagagaaaaacaacctaatccatcttactcttac
atttggggcaccaaggccctgaccacatcctacagtgcaatatacggactctaccatggg
tttgttggagtccctcacttcaagtctatctgtcgtctgcttggatatcagggaatagca
gttgtaatcgaagagctgctcaaaattgttcaagctttgttgaaaggaactctgatggac
tatgtgaaaaccttgatgacggtgatgcccaatgtgtgtcgtctgctccgatatgattat
ggatccccaggtgtaatgggttactatcaggctcagctagctgagttaattcagtatcct
gatttaagaacagaagtcttccagagctttagagaggtggggaatgccatactgttctgt
atgctggtagaacaggcactgacccaggaagaagtttgcgacttgaaacatgcggcacca
tttcagaacatcattccgaagcccttcatacccataaaagagggagataaccgcaaggag
aaggagcaggagctgaagactctgatgaagagactggaggccaagtacgcggcgctgcaa
gtggttcccgtcatcagcaagctgggcacccctcagcaagcagacatagccgcggagggt
gacctccttaccagagagaggctgtgctgcggactctccatgtttgagattgtgctcacc
aggattaagacttttgtggaggacccgatttggcatggtcagccgccaagcaacggcgtc
atgaacatagacgaatgcaccgagtttcaccgactgtggagtgctatccagtttgtttac
tgtatgccggtccgggagaatgagtactcaatcgaggaattgtatggggagggactgaat
tgggcgggatgtgccctcattgtcttgttgtcacagcaacggaggtttgaggcgctggat
ttctgttaccacngtctcaaggtcaaccgagtggatatgaaggacgaaaatgtcaaaggc
attcaattgaagaaaatggtggaccgtattagaaaatttcaaatcctgaacaatcaaatc
tttgccgttttgaacaaatacttaaagacaagtgactcggagagtatccctgtggaacat
gtgcgttgtttccagccccccattcatcagtcgttagccaccacaatataa
DBGET
integrated database retrieval system
