Crassostrea virginica (eastern oyster): 111125553
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Entry
111125553 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111125553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111125553
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111125553
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
111125553
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111125553
Exosomal proteins of colorectal cancer cells
111125553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
Motif
Other DBs
NCBI-GeneID:
111125553
NCBI-ProteinID:
XP_022325191
UniProt:
A0A8B8DE24
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Position
3:complement(75049474..75056138)
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AA seq
382 aa
AA seq
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MDRFEWGDTNLVPGEEQVNFQTGIAIYDGQDKTCFENGALTLTTHKVIWKDNRDRTRVLT
LQHSLVVYIEEQSSGLLKSAKIVVHVSVPGPSKKPGPVTSSRNDFIRFSFREAGEGQFFR
DYNEQLQQRKWEHVIPSRSAAARAPRHRAGIMGIEQTIQQAHASTDQNISQAFQDLTKLM
EKAKEMVKLSKTIATKIKDKQGNVTDDETIRFKSYLLSMGIPDPVTRETHGSGDKYYTEL
ARQLSSVLEKPLKECGGIMTLTDVYCRVNRARGMELLSPEDLLNSCEMFEXLRLPIRLKT
FDSGVMVLQLQSHDEDQVIHLTTQLVEDKGSLTAEDLSKEVGVSVILAKERLLLTEKVGG
ICRDECVEGLRFYPNLFLTKVT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatagattcgaatggggagacacaaatctggttcctggagaagaacaagtgaacttt
caaacaggaattgcaatatatgatggacaagacaagacttgctttgaaaatggagcatta
acactgaccacccataaagtgatatggaaagacaacagagaccggacccgggttctgact
ctacaacacagtcttgtagtttacattgaagagcagtcctcgggtttgctaaaaagtgct
aagattgtagttcacgtatcggttcctgggcccagtaagaagcctggacctgtgacttca
agtcgcaacgacttcatcagattctcctttagggaagcaggtgaagggcagtttttcaga
gattacaatgaacaattacagcaaaggaaatgggagcatgttataccttcaaggagcgca
gcagcaagggctcctcgtcacagagctggtatcatgggcatcgagcagaccattcagcag
gcccacgccagtacagaccaaaatatctcccaagcttttcaggatttaacaaaacttatg
gaaaaggcaaaggaaatggtgaaactgtccaaaacaatcgcaaccaagatcaaagacaaa
caaggcaatgtcacagacgatgagacaataagattcaagtcttacctgctgagcatgggt
atccctgaccctgtcaccagggaaacgcatgggtcaggtgacaagtactacactgagctg
gccagacagctgtccagtgttctagaaaaaccactcaaggaatgcggtggaataatgaca
ctaacagatgtgtattgccgagtgaacagagccagaggcatggagttgttatcaccagag
gacttgctgaattcgtgtgaaatgtttgaanctttgagactgcctatcagactcaagacc
tttgacagtggtgtaatggtattacaactgcagagtcacgatgaagaccaagtcattcac
cttaccactcaactggtggaagacaagggttccttaactgctgaagatttgtccaaagaa
gtaggagtgtctgtcattttggccaaggaaagattacttctcacagagaaggtgggaggg
atctgtagagatgaatgcgtggaaggacttagattttatcccaatctcttcttgacaaaa
gtcacctga
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