Crassostrea virginica (eastern oyster): 111125609
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Entry
111125609 CDS
T09197
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111125609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111125609
Enzymes [BR:
cvn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111125609
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111125609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
111125609
NCBI-ProteinID:
XP_022325295
UniProt:
A0A8B8DCA6
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Position
3:complement(5565677..5570619)
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AA seq
391 aa
AA seq
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MAAPIGSGKILCRTSEIRLDRILKSGQSFRWKEEKPGVWTGVLFNKIWKFWQSESAISFQ
VFGNQKEVKLEGEPEKIKGKEELGATENSNNTTVQSVAREPDNTELVYEDLIKDYFQLRV
KVENLYKEWSEVDSNFQSVSSKFEGIRILRQDPVENLFSFICSSNNHISRISSMVEKLCE
NYGTEVGEVDGRTYFSFPSVFDISQDGVENELRNLGFGYRAKYINQSARQIVNKGGELWL
RSLREKPYEEAKRELMALNGVGAKVADCVCLMSLDKTDALPVDTHVWQIAARDYLPRLSN
SKTLTDKLYKEIGDHFRTLWGPYAGWAQAVLFTADLKQFKDKIESPPSKTKTKKSDDESG
SPTKKTRTETGSRPDAYRGKSQNNQRRKKKC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccattggtagtggaaagattctgtgtcgcacatcagaaattcggttagat
aggattctcaaaagcggtcaatcatttcggtggaaggaggagaagccaggagtttggacg
ggagtgttgttcaacaaaatatggaaattttggcaatcagaatcagccatttccttccag
gtctttggaaaccagaaagaggtaaaactagaaggggaacctgaaaaaatcaaaggcaaa
gaggagttaggagccacggagaactccaataatacaacagtgcaatcagtcgcaagggaa
ccggacaacacggaacttgtttatgaagatttaatcaaggattactttcagttgagagta
aaggtggaaaatctgtacaaagagtggtctgaagtggattccaactttcagagtgtttcc
tcaaagttcgaaggaatacggattttacgccaagatcctgttgagaatttgttctctttt
atctgttcatcaaataatcacatatccagaatatcatccatggtagaaaaactctgtgag
aactatggcacagaagtgggggaggttgatggaaggacgtacttcagtttcccatccgtc
ttcgatatatcccaggatggtgttgagaatgagttaaggaatctaggatttgggtacagg
gcaaaatacatcaatcagagtgctagacagattgtgaacaaagggggagaactctggttg
agatctctaagagaaaaaccatatgaagaggcaaagagagagttaatggccctgaatgga
gtaggagctaaggtagctgactgtgtctgcctgatgtctctagataagacggacgctcta
cctgtcgacacccacgtctggcagatcgctgcccgggactacctacccaggctatccaac
agcaaaactctgacggataaactctataaagaaataggagaccattttaggaccttgtgg
gggccttatgctggatgggcacaagctgttctctttacagctgatttgaagcaatttaaa
gacaaaattgaaagtccaccatcaaaaacaaaaacaaagaaatctgatgatgaatcagga
agccccacaaagaagacaagaacagagacagggtctcggcccgatgcatacagagggaaa
agtcagaacaaccaaagacggaaaaagaaatgttga
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